Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC114811.1-201ENST00000507207 168 ntBASIC0.78□□□□□ -2.28
CCDC65Q8IXS2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.78□□□□□ -2.28
CCDC65Q8IXS2 AC240442.1-201ENST00000616055 283 ntBASIC0.78□□□□□ -2.28
CCDC65Q8IXS2 MIR6835-201ENST00000621552 64 ntBASIC0.78□□□□□ -2.28
CCDC65Q8IXS2 Y_RNA.577-201ENST00000384794 101 ntBASIC0.77□□□□□ -2.29
CCDC65Q8IXS2 AL031003.1-201ENST00000404229 172 ntBASIC0.77□□□□□ -2.29
CCDC65Q8IXS2 RNU6-1156P-201ENST00000410365 100 ntBASIC0.77□□□□□ -2.29
CCDC65Q8IXS2 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.77□□□□□ -2.29
CCDC65Q8IXS2 SNORD111.1-201ENST00000516421 86 ntBASIC0.77□□□□□ -2.29
CCDC65Q8IXS2 RNU6-197P-201ENST00000516680 100 ntBASIC0.77□□□□□ -2.29
CCDC65Q8IXS2 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.77□□□□□ -2.29
CCDC65Q8IXS2 MIR6504-201ENST00000613520 61 ntBASIC0.77□□□□□ -2.29
CCDC65Q8IXS2 Y_RNA.166-201ENST00000363730 102 ntBASIC0.76□□□□□ -2.29
CCDC65Q8IXS2 SNORD114-22-201ENST00000365423 72 ntBASIC0.76□□□□□ -2.29
CCDC65Q8IXS2 RNU6-163P-201ENST00000384396 106 ntBASIC0.76□□□□□ -2.29
CCDC65Q8IXS2 RNU6-310P-201ENST00000384655 107 ntBASIC0.76□□□□□ -2.29
CCDC65Q8IXS2 MIR520E-201ENST00000384867 87 ntBASIC0.76□□□□□ -2.29
CCDC65Q8IXS2 MIR200A-201ENST00000384875 90 ntBASIC0.76□□□□□ -2.29
CCDC65Q8IXS2 SNORA75.6-201ENST00000391318 127 ntBASIC0.76□□□□□ -2.29
CCDC65Q8IXS2 MIR1298-201ENST00000408783 112 ntBASIC0.76□□□□□ -2.29
CCDC65Q8IXS2 RNU2-61P-201ENST00000411069 191 ntBASIC0.76□□□□□ -2.29
CCDC65Q8IXS2 MTND5P15-201ENST00000434246 349 ntBASIC0.76□□□□□ -2.29
CCDC65Q8IXS2 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.76□□□□□ -2.29
CCDC65Q8IXS2 AC117454.1-201ENST00000491120 168 ntBASIC0.76□□□□□ -2.29
CCDC65Q8IXS2 PDCD5P2-201ENST00000507570 312 ntBASIC0.76□□□□□ -2.29
CCDC65Q8IXS2 AC136628.3-201ENST00000521868 290 ntBASIC0.76□□□□□ -2.29
CCDC65Q8IXS2 AC068790.6-201ENST00000602558 258 ntBASIC0.76□□□□□ -2.29
CCDC65Q8IXS2 AC098679.4-201ENST00000624241 654 ntBASIC0.76□□□□□ -2.29
CCDC65Q8IXS2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.75□□□□□ -2.29
CCDC65Q8IXS2 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
CCDC65Q8IXS2 CASC19-280ENST00000642102 1351 ntBASIC0.75□□□□□ -2.29
CCDC65Q8IXS2 AL442644.1-201ENST00000454390 3105 ntBASIC0.75□□□□□ -2.29
CCDC65Q8IXS2 SNORD68-201ENST00000363214 84 ntBASIC0.75□□□□□ -2.29
CCDC65Q8IXS2 Y_RNA.164-201ENST00000363709 102 ntBASIC0.75□□□□□ -2.29
CCDC65Q8IXS2 RNU6-1188P-201ENST00000363795 107 ntBASIC0.75□□□□□ -2.29
CCDC65Q8IXS2 RNU6-926P-201ENST00000384075 107 ntBASIC0.75□□□□□ -2.29
CCDC65Q8IXS2 SNORA69.1-201ENST00000390904 137 ntBASIC0.75□□□□□ -2.29
CCDC65Q8IXS2 RNU2-54P-201ENST00000410299 190 ntBASIC0.75□□□□□ -2.29
CCDC65Q8IXS2 RPL23AP50-201ENST00000434149 455 ntBASIC0.75□□□□□ -2.29
CCDC65Q8IXS2 RNU6-1012P-201ENST00000516606 109 ntBASIC0.75□□□□□ -2.29
CCDC65Q8IXS2 RNU6-307P-201ENST00000516743 106 ntBASIC0.75□□□□□ -2.29
CCDC65Q8IXS2 AC011604.1-201ENST00000545978 196 ntBASIC0.75□□□□□ -2.29
CCDC65Q8IXS2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
CCDC65Q8IXS2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.75□□□□□ -2.29
CCDC65Q8IXS2 AC117470.1-201ENST00000381974 330 ntBASIC0.74□□□□□ -2.29
CCDC65Q8IXS2 RNY3P4-201ENST00000384428 101 ntBASIC0.74□□□□□ -2.29
CCDC65Q8IXS2 Y_RNA.599-201ENST00000410489 109 ntBASIC0.74□□□□□ -2.29
CCDC65Q8IXS2 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.74□□□□□ -2.29
CCDC65Q8IXS2 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.74□□□□□ -2.29
CCDC65Q8IXS2 SNORA70.12-201ENST00000516084 153 ntBASIC0.74□□□□□ -2.29
CCDC65Q8IXS2 DEFB108E-201ENST00000524692 240 ntBASIC0.74□□□□□ -2.29
CCDC65Q8IXS2 CYP3A137P-201ENST00000562436 69 ntBASIC0.74□□□□□ -2.29
CCDC65Q8IXS2 AL590095.2-201ENST00000604136 117 ntBASIC0.74□□□□□ -2.29
CCDC65Q8IXS2 RNA5SP264-201ENST00000363115 107 ntBASIC0.73□□□□□ -2.29
CCDC65Q8IXS2 RNY3P11-201ENST00000364153 102 ntBASIC0.73□□□□□ -2.29
CCDC65Q8IXS2 SNORD81.2-201ENST00000365153 76 ntBASIC0.73□□□□□ -2.29
CCDC65Q8IXS2 Y_RNA.474-201ENST00000384341 102 ntBASIC0.73□□□□□ -2.29
CCDC65Q8IXS2 MIR608-201ENST00000384820 100 ntBASIC0.73□□□□□ -2.29
CCDC65Q8IXS2 MIR522-201ENST00000385071 87 ntBASIC0.73□□□□□ -2.29
CCDC65Q8IXS2 RNU6-370P-201ENST00000411008 104 ntBASIC0.73□□□□□ -2.29
CCDC65Q8IXS2 MRPS18CP6-201ENST00000423587 223 ntBASIC0.73□□□□□ -2.29
CCDC65Q8IXS2 RNU7-90P-201ENST00000459216 62 ntBASIC0.73□□□□□ -2.29
CCDC65Q8IXS2 RNU7-41P-201ENST00000515917 61 ntBASIC0.73□□□□□ -2.29
CCDC65Q8IXS2 RNU6-436P-201ENST00000516171 114 ntBASIC0.73□□□□□ -2.29
CCDC65Q8IXS2 RNA5SP255-201ENST00000516370 107 ntBASIC0.73□□□□□ -2.29
CCDC65Q8IXS2 AC138305.3-201ENST00000624988 240 ntBASIC0.73□□□□□ -2.29
CCDC65Q8IXS2 AC027514.1-201ENST00000588561 1603 ntBASIC0.72□□□□□ -2.29
CCDC65Q8IXS2 Y_RNA.160-201ENST00000363677 92 ntBASIC0.72□□□□□ -2.29
CCDC65Q8IXS2 Y_RNA.191-201ENST00000363972 113 ntBASIC0.72□□□□□ -2.29
CCDC65Q8IXS2 Y_RNA.253-201ENST00000364562 112 ntBASIC0.72□□□□□ -2.29
CCDC65Q8IXS2 RNU6-20P-201ENST00000384106 107 ntBASIC0.72□□□□□ -2.29
CCDC65Q8IXS2 RNU6-890P-201ENST00000384121 107 ntBASIC0.72□□□□□ -2.29
CCDC65Q8IXS2 MIR508-201ENST00000384857 115 ntBASIC0.72□□□□□ -2.29
CCDC65Q8IXS2 MIR452-201ENST00000385020 85 ntBASIC0.72□□□□□ -2.29
CCDC65Q8IXS2 MIR605-201ENST00000385078 83 ntBASIC0.72□□□□□ -2.29
CCDC65Q8IXS2 MT-TL1-201ENST00000386347 75 ntBASIC0.72□□□□□ -2.29
CCDC65Q8IXS2 MIR1185-1-201ENST00000408598 86 ntBASIC0.72□□□□□ -2.29
CCDC65Q8IXS2 RNU6-1304P-201ENST00000411374 106 ntBASIC0.72□□□□□ -2.29
CCDC65Q8IXS2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.72□□□□□ -2.29
CCDC65Q8IXS2 AC090142.3-201ENST00000519012 385 ntBASIC0.72□□□□□ -2.29
CCDC65Q8IXS2 AC004817.2-201ENST00000561794 651 ntBASIC0.72□□□□□ -2.29
CCDC65Q8IXS2 AC022306.2-201ENST00000617563 647 ntBASIC0.72□□□□□ -2.29
CCDC65Q8IXS2 TPTEP1-208ENST00000636884 213 ntBASIC0.72□□□□□ -2.29
CCDC65Q8IXS2 RNU6-626P-201ENST00000363354 107 ntBASIC0.71□□□□□ -2.3
CCDC65Q8IXS2 SNORA25.9-201ENST00000365087 128 ntBASIC0.71□□□□□ -2.3
CCDC65Q8IXS2 Y_RNA.446-201ENST00000384178 104 ntBASIC0.71□□□□□ -2.3
CCDC65Q8IXS2 RNU6-1105P-201ENST00000384774 107 ntBASIC0.71□□□□□ -2.3
CCDC65Q8IXS2 MIR625-201ENST00000385047 85 ntBASIC0.71□□□□□ -2.3
CCDC65Q8IXS2 MIR516B2-201ENST00000385190 85 ntBASIC0.71□□□□□ -2.3
CCDC65Q8IXS2 RNU6-192P-201ENST00000391253 100 ntBASIC0.71□□□□□ -2.3
CCDC65Q8IXS2 MIR942-201ENST00000401111 86 ntBASIC0.71□□□□□ -2.3
CCDC65Q8IXS2 RNU6-733P-201ENST00000410759 104 ntBASIC0.71□□□□□ -2.3
CCDC65Q8IXS2 AL035398.1-201ENST00000430869 322 ntBASIC0.71□□□□□ -2.3
CCDC65Q8IXS2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.71□□□□□ -2.3
CCDC65Q8IXS2 FCF1P4-201ENST00000448326 183 ntBASIC0.71□□□□□ -2.3
CCDC65Q8IXS2 MTCO3P10-201ENST00000455912 772 ntBASIC0.71□□□□□ -2.3
CCDC65Q8IXS2 Y_RNA.635-201ENST00000459041 101 ntBASIC0.71□□□□□ -2.3
CCDC65Q8IXS2 RPS29P1-201ENST00000465274 159 ntBASIC0.71□□□□□ -2.3
CCDC65Q8IXS2 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.71□□□□□ -2.3
CCDC65Q8IXS2 SNORA74.3-201ENST00000517108 154 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms