Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.74□□□□□ -2.29
CCDC50Q8IVM0 AC004817.2-201ENST00000561794 651 ntBASIC0.74□□□□□ -2.29
CCDC50Q8IVM0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.74□□□□□ -2.29
CCDC50Q8IVM0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.73□□□□□ -2.29
CCDC50Q8IVM0 SNORD114-7-201ENST00000362520 77 ntBASIC0.73□□□□□ -2.29
CCDC50Q8IVM0 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
CCDC50Q8IVM0 Y_RNA.592-201ENST00000410274 109 ntBASIC0.73□□□□□ -2.29
CCDC50Q8IVM0 RNU6-1156P-201ENST00000410365 100 ntBASIC0.73□□□□□ -2.29
CCDC50Q8IVM0 Y_RNA.646-201ENST00000410980 101 ntBASIC0.73□□□□□ -2.29
CCDC50Q8IVM0 AL390729.2-201ENST00000416137 156 ntBASIC0.73□□□□□ -2.29
CCDC50Q8IVM0 MLLT10P1-201ENST00000418346 262 ntBASIC0.73□□□□□ -2.29
CCDC50Q8IVM0 MTND1P4-201ENST00000435196 415 ntBASIC0.73□□□□□ -2.29
CCDC50Q8IVM0 SUMO1P2-201ENST00000452524 304 ntBASIC0.73□□□□□ -2.29
CCDC50Q8IVM0 RNU7-169P-201ENST00000459456 61 ntBASIC0.73□□□□□ -2.29
CCDC50Q8IVM0 RNU7-41P-201ENST00000515917 61 ntBASIC0.73□□□□□ -2.29
CCDC50Q8IVM0 AC023827.1-201ENST00000569247 97 ntBASIC0.73□□□□□ -2.29
CCDC50Q8IVM0 Y_RNA.72-201ENST00000362894 103 ntBASIC0.72□□□□□ -2.29
CCDC50Q8IVM0 RNA5SP264-201ENST00000363115 107 ntBASIC0.72□□□□□ -2.29
CCDC50Q8IVM0 RNY1P10-201ENST00000363268 113 ntBASIC0.72□□□□□ -2.29
CCDC50Q8IVM0 SNORA69.1-201ENST00000390904 137 ntBASIC0.72□□□□□ -2.29
CCDC50Q8IVM0 RNU6-1199P-201ENST00000411249 104 ntBASIC0.72□□□□□ -2.29
CCDC50Q8IVM0 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.72□□□□□ -2.29
CCDC50Q8IVM0 RNA5SP255-201ENST00000516370 107 ntBASIC0.72□□□□□ -2.29
CCDC50Q8IVM0 AC136628.3-201ENST00000521868 290 ntBASIC0.72□□□□□ -2.29
CCDC50Q8IVM0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.72□□□□□ -2.29
CCDC50Q8IVM0 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.72□□□□□ -2.29
CCDC50Q8IVM0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.72□□□□□ -2.29
CCDC50Q8IVM0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.72□□□□□ -2.29
CCDC50Q8IVM0 AC011476.5-201ENST00000615594 130 ntBASIC0.72□□□□□ -2.29
CCDC50Q8IVM0 AC240442.1-201ENST00000616055 283 ntBASIC0.72□□□□□ -2.29
CCDC50Q8IVM0 MIR6835-201ENST00000621552 64 ntBASIC0.72□□□□□ -2.29
CCDC50Q8IVM0 RNU6-767P-201ENST00000384132 107 ntBASIC0.71□□□□□ -2.3
CCDC50Q8IVM0 RNU6-1297P-201ENST00000384415 104 ntBASIC0.71□□□□□ -2.3
CCDC50Q8IVM0 RNU6-310P-201ENST00000384655 107 ntBASIC0.71□□□□□ -2.3
CCDC50Q8IVM0 MIR452-201ENST00000385020 85 ntBASIC0.71□□□□□ -2.3
CCDC50Q8IVM0 MIR1185-1-201ENST00000408598 86 ntBASIC0.71□□□□□ -2.3
CCDC50Q8IVM0 RNU6-370P-201ENST00000411008 104 ntBASIC0.71□□□□□ -2.3
CCDC50Q8IVM0 PDCL2P1-201ENST00000419302 352 ntBASIC0.71□□□□□ -2.3
CCDC50Q8IVM0 AC004941.2-201ENST00000427009 228 ntBASIC0.71□□□□□ -2.3
CCDC50Q8IVM0 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.71□□□□□ -2.3
CCDC50Q8IVM0 AL035398.1-201ENST00000430869 322 ntBASIC0.71□□□□□ -2.3
CCDC50Q8IVM0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.71□□□□□ -2.3
CCDC50Q8IVM0 AP003716.2-201ENST00000528260 108 ntBASIC0.71□□□□□ -2.3
CCDC50Q8IVM0 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.71□□□□□ -2.3
CCDC50Q8IVM0 MIR4762-201ENST00000585261 75 ntBASIC0.71□□□□□ -2.3
CCDC50Q8IVM0 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.71□□□□□ -2.3
CCDC50Q8IVM0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.71□□□□□ -2.3
CCDC50Q8IVM0 AC027514.1-201ENST00000588561 1603 ntBASIC0.71□□□□□ -2.3
CCDC50Q8IVM0 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
CCDC50Q8IVM0 CASC19-280ENST00000642102 1351 ntBASIC0.7□□□□□ -2.3
CCDC50Q8IVM0 MIR103A2-201ENST00000362154 78 ntBASIC0.7□□□□□ -2.3
CCDC50Q8IVM0 U8.5-201ENST00000364528 136 ntBASIC0.7□□□□□ -2.3
CCDC50Q8IVM0 Y_RNA.253-201ENST00000364562 112 ntBASIC0.7□□□□□ -2.3
CCDC50Q8IVM0 RNU6-1105P-201ENST00000384774 107 ntBASIC0.7□□□□□ -2.3
CCDC50Q8IVM0 MIR522-201ENST00000385071 87 ntBASIC0.7□□□□□ -2.3
CCDC50Q8IVM0 RNU2-54P-201ENST00000410299 190 ntBASIC0.7□□□□□ -2.3
CCDC50Q8IVM0 RPS26P5-201ENST00000418544 335 ntBASIC0.7□□□□□ -2.3
CCDC50Q8IVM0 MRPS18CP6-201ENST00000423587 223 ntBASIC0.7□□□□□ -2.3
CCDC50Q8IVM0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.7□□□□□ -2.3
CCDC50Q8IVM0 RNU6-1012P-201ENST00000516606 109 ntBASIC0.7□□□□□ -2.3
CCDC50Q8IVM0 RNU6-307P-201ENST00000516743 106 ntBASIC0.7□□□□□ -2.3
CCDC50Q8IVM0 SNORA18.7-201ENST00000516910 131 ntBASIC0.7□□□□□ -2.3
CCDC50Q8IVM0 MIR2355-201ENST00000517199 87 ntBASIC0.7□□□□□ -2.3
CCDC50Q8IVM0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
CCDC50Q8IVM0 MIR337-201ENST00000362281 93 ntBASIC0.69□□□□□ -2.3
CCDC50Q8IVM0 RNU6-324P-201ENST00000363957 106 ntBASIC0.69□□□□□ -2.3
CCDC50Q8IVM0 RNU1-93P-201ENST00000364704 169 ntBASIC0.69□□□□□ -2.3
CCDC50Q8IVM0 RNU6-20P-201ENST00000384106 107 ntBASIC0.69□□□□□ -2.3
CCDC50Q8IVM0 RNU6-708P-201ENST00000384217 107 ntBASIC0.69□□□□□ -2.3
CCDC50Q8IVM0 Y_RNA.577-201ENST00000384794 101 ntBASIC0.69□□□□□ -2.3
CCDC50Q8IVM0 MIR508-201ENST00000384857 115 ntBASIC0.69□□□□□ -2.3
CCDC50Q8IVM0 MIR520C-201ENST00000385005 87 ntBASIC0.69□□□□□ -2.3
CCDC50Q8IVM0 RNU2-61P-201ENST00000411069 191 ntBASIC0.69□□□□□ -2.3
CCDC50Q8IVM0 FCF1P9-201ENST00000412546 282 ntBASIC0.69□□□□□ -2.3
CCDC50Q8IVM0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.69□□□□□ -2.3
CCDC50Q8IVM0 MTND1P34-201ENST00000438556 671 ntBASIC0.69□□□□□ -2.3
CCDC50Q8IVM0 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.69□□□□□ -2.3
CCDC50Q8IVM0 RNU6-436P-201ENST00000516171 114 ntBASIC0.69□□□□□ -2.3
CCDC50Q8IVM0 SNORA74.3-201ENST00000517108 154 ntBASIC0.69□□□□□ -2.3
CCDC50Q8IVM0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.69□□□□□ -2.3
CCDC50Q8IVM0 AC131055.1-201ENST00000584626 316 ntBASIC0.69□□□□□ -2.3
CCDC50Q8IVM0 AC006380.1-201ENST00000603598 186 ntBASIC0.69□□□□□ -2.3
CCDC50Q8IVM0 AC098679.4-201ENST00000624241 654 ntBASIC0.69□□□□□ -2.3
CCDC50Q8IVM0 RNU6-845P-201ENST00000362578 103 ntBASIC0.68□□□□□ -2.3
CCDC50Q8IVM0 RNU6-626P-201ENST00000363354 107 ntBASIC0.68□□□□□ -2.3
CCDC50Q8IVM0 Y_RNA.160-201ENST00000363677 92 ntBASIC0.68□□□□□ -2.3
CCDC50Q8IVM0 RNU6-1188P-201ENST00000363795 107 ntBASIC0.68□□□□□ -2.3
CCDC50Q8IVM0 RNU6-890P-201ENST00000384121 107 ntBASIC0.68□□□□□ -2.3
CCDC50Q8IVM0 MIR520E-201ENST00000384867 87 ntBASIC0.68□□□□□ -2.3
CCDC50Q8IVM0 MIR625-201ENST00000385047 85 ntBASIC0.68□□□□□ -2.3
CCDC50Q8IVM0 SNORA70.12-201ENST00000516084 153 ntBASIC0.68□□□□□ -2.3
CCDC50Q8IVM0 Y_RNA.691-201ENST00000516611 103 ntBASIC0.68□□□□□ -2.3
CCDC50Q8IVM0 SNORD45.4-201ENST00000516629 73 ntBASIC0.68□□□□□ -2.3
CCDC50Q8IVM0 AL590095.2-201ENST00000604136 117 ntBASIC0.68□□□□□ -2.3
CCDC50Q8IVM0 Y_RNA.279-201ENST00000364763 95 ntBASIC0.67□□□□□ -2.3
CCDC50Q8IVM0 SNORD50B-201ENST00000364995 70 ntBASIC0.67□□□□□ -2.3
CCDC50Q8IVM0 SNORD114-22-201ENST00000365423 72 ntBASIC0.67□□□□□ -2.3
CCDC50Q8IVM0 Y_RNA.446-201ENST00000384178 104 ntBASIC0.67□□□□□ -2.3
CCDC50Q8IVM0 MIR136-201ENST00000385207 82 ntBASIC0.67□□□□□ -2.3
CCDC50Q8IVM0 SNORA75.6-201ENST00000391318 127 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms