Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.7□□□□□ -2.3
NUDCD3Q8IVD9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.7□□□□□ -2.3
NUDCD3Q8IVD9 MIR96-201ENST00000362288 78 ntBASIC0.69□□□□□ -2.3
NUDCD3Q8IVD9 RNA5SP264-201ENST00000363115 107 ntBASIC0.69□□□□□ -2.3
NUDCD3Q8IVD9 Y_RNA.101-201ENST00000363154 102 ntBASIC0.69□□□□□ -2.3
NUDCD3Q8IVD9 Y_RNA.164-201ENST00000363709 102 ntBASIC0.69□□□□□ -2.3
NUDCD3Q8IVD9 MIR516B2-201ENST00000385190 85 ntBASIC0.69□□□□□ -2.3
NUDCD3Q8IVD9 SNORA69.1-201ENST00000390904 137 ntBASIC0.69□□□□□ -2.3
NUDCD3Q8IVD9 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
NUDCD3Q8IVD9 Y_RNA.592-201ENST00000410274 109 ntBASIC0.69□□□□□ -2.3
NUDCD3Q8IVD9 MTND4P17-201ENST00000470444 350 ntBASIC0.69□□□□□ -2.3
NUDCD3Q8IVD9 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.69□□□□□ -2.3
NUDCD3Q8IVD9 RNA5SP255-201ENST00000516370 107 ntBASIC0.69□□□□□ -2.3
NUDCD3Q8IVD9 AC011604.1-201ENST00000545978 196 ntBASIC0.69□□□□□ -2.3
NUDCD3Q8IVD9 MIR4762-201ENST00000585261 75 ntBASIC0.69□□□□□ -2.3
NUDCD3Q8IVD9 MIR6767-201ENST00000637302 66 ntBASIC0.69□□□□□ -2.3
NUDCD3Q8IVD9 Y_RNA.172-201ENST00000363765 102 ntBASIC0.68□□□□□ -2.3
NUDCD3Q8IVD9 Y_RNA.330-201ENST00000365230 109 ntBASIC0.68□□□□□ -2.3
NUDCD3Q8IVD9 SNORA25.10-201ENST00000515926 124 ntBASIC0.68□□□□□ -2.3
NUDCD3Q8IVD9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.68□□□□□ -2.3
NUDCD3Q8IVD9 AC006380.1-201ENST00000603598 186 ntBASIC0.68□□□□□ -2.3
NUDCD3Q8IVD9 AC108706.1-201ENST00000611053 297 ntBASIC0.68□□□□□ -2.3
NUDCD3Q8IVD9 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.68□□□□□ -2.3
NUDCD3Q8IVD9 MIR103A2-201ENST00000362154 78 ntBASIC0.67□□□□□ -2.3
NUDCD3Q8IVD9 Y_RNA.4-201ENST00000362333 112 ntBASIC0.67□□□□□ -2.3
NUDCD3Q8IVD9 SNORA25.3-201ENST00000363205 127 ntBASIC0.67□□□□□ -2.3
NUDCD3Q8IVD9 RNU6-767P-201ENST00000384132 107 ntBASIC0.67□□□□□ -2.3
NUDCD3Q8IVD9 Y_RNA.577-201ENST00000384794 101 ntBASIC0.67□□□□□ -2.3
NUDCD3Q8IVD9 MIR625-201ENST00000385047 85 ntBASIC0.67□□□□□ -2.3
NUDCD3Q8IVD9 RNU2-54P-201ENST00000410299 190 ntBASIC0.67□□□□□ -2.3
NUDCD3Q8IVD9 RNU6-1156P-201ENST00000410365 100 ntBASIC0.67□□□□□ -2.3
NUDCD3Q8IVD9 RPL30P15-201ENST00000457129 321 ntBASIC0.67□□□□□ -2.3
NUDCD3Q8IVD9 AC117454.1-201ENST00000491120 168 ntBASIC0.67□□□□□ -2.3
NUDCD3Q8IVD9 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
NUDCD3Q8IVD9 AC240442.1-201ENST00000616055 283 ntBASIC0.67□□□□□ -2.3
NUDCD3Q8IVD9 Y_RNA.253-201ENST00000364562 112 ntBASIC0.66□□□□□ -2.3
NUDCD3Q8IVD9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
NUDCD3Q8IVD9 MTND1P4-201ENST00000435196 415 ntBASIC0.66□□□□□ -2.3
NUDCD3Q8IVD9 RNU7-41P-201ENST00000515917 61 ntBASIC0.66□□□□□ -2.3
NUDCD3Q8IVD9 SNORA74.3-201ENST00000517108 154 ntBASIC0.66□□□□□ -2.3
NUDCD3Q8IVD9 AP003716.2-201ENST00000528260 108 ntBASIC0.66□□□□□ -2.3
NUDCD3Q8IVD9 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.66□□□□□ -2.3
NUDCD3Q8IVD9 AC023827.1-201ENST00000569247 97 ntBASIC0.66□□□□□ -2.3
NUDCD3Q8IVD9 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.66□□□□□ -2.3
NUDCD3Q8IVD9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 MIR373-201ENST00000362273 69 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 MIR520C-201ENST00000385005 87 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 MIR522-201ENST00000385071 87 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 MIR136-201ENST00000385207 82 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 MIR1185-1-201ENST00000408598 86 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 Y_RNA.646-201ENST00000410980 101 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 RNU6-370P-201ENST00000411008 104 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 RNU2-61P-201ENST00000411069 191 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 RNU6-1199P-201ENST00000411249 104 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 FCF1P9-201ENST00000412546 282 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 AL390729.2-201ENST00000416137 156 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 MLLT10P1-201ENST00000418346 262 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 RPS26P5-201ENST00000418544 335 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 AC004941.2-201ENST00000427009 228 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 AL035398.1-201ENST00000430869 322 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 FABP5P4-201ENST00000437203 171 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 FCF1P4-201ENST00000448326 183 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 Y_RNA.691-201ENST00000516611 103 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 SNORD45.4-201ENST00000516629 73 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 RNU6-264P-201ENST00000517134 104 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 AC131055.1-201ENST00000584626 316 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 AC005176.2-201ENST00000596933 147 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 AC136443.5-201ENST00000603741 370 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 MIR8070-201ENST00000616510 88 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 SEPT14P17-201ENST00000617978 177 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 AC098679.4-201ENST00000624241 654 ntBASIC0.65□□□□□ -2.31
NUDCD3Q8IVD9 AC023934.1-201ENST00000574529 2389 ntBASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 AC027514.1-201ENST00000588561 1603 ntBASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 RNU6-845P-201ENST00000362578 103 ntBASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 RNU6-324P-201ENST00000363957 106 ntBASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 RNY3P11-201ENST00000364153 102 ntBASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 RNU1-93P-201ENST00000364704 169 ntBASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 RNU6-1335P-201ENST00000365426 107 ntBASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 SNORD14.1-201ENST00000365609 90 ntBASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 AC117470.1-201ENST00000381974 330 ntBASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 RNU6-1297P-201ENST00000384415 104 ntBASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 RNU6-310P-201ENST00000384655 107 ntBASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 SNORA75.6-201ENST00000391318 127 ntBASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 MIR1276-201ENST00000408707 83 ntBASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 MRPS18CP6-201ENST00000423587 223 ntBASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 Y_RNA.635-201ENST00000459041 101 ntBASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 RNU7-169P-201ENST00000459456 61 ntBASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 RNU6-966P-201ENST00000516479 104 ntBASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 SNORA18.7-201ENST00000516910 131 ntBASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 AL353765.1-201ENST00000605514 183 ntBASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 MIR6835-201ENST00000621552 64 ntBASIC0.64□□□□□ -2.31
NUDCD3Q8IVD9 RNU6-1084P-201ENST00000362498 107 ntBASIC0.63□□□□□ -2.31
NUDCD3Q8IVD9 RNU6-1188P-201ENST00000363795 107 ntBASIC0.63□□□□□ -2.31
NUDCD3Q8IVD9 SNORA25.9-201ENST00000365087 128 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms