Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 AC108059.2-201ENST00000434626 151 ntBASIC-1.93□□□□□ -2.72
LINC00643Q86TS7 SNORD38.3-201ENST00000516599 73 ntBASIC-1.93□□□□□ -2.72
LINC00643Q86TS7 AC022784.5-201ENST00000522241 437 ntBASIC-1.93□□□□□ -2.72
LINC00643Q86TS7 AP003072.1-201ENST00000531740 145 ntBASIC-1.93□□□□□ -2.72
LINC00643Q86TS7 MIR4280-201ENST00000582178 76 ntBASIC-1.93□□□□□ -2.72
LINC00643Q86TS7 MIR4324-201ENST00000584846 72 ntBASIC-1.93□□□□□ -2.72
LINC00643Q86TS7 RNU6-86P-201ENST00000606534 107 ntBASIC-1.93□□□□□ -2.72
LINC00643Q86TS7 AC245297.2-201ENST00000610119 565 ntBASIC-1.93□□□□□ -2.72
LINC00643Q86TS7 AC013437.2-201ENST00000639587 677 ntBASIC-1.93□□□□□ -2.72
LINC00643Q86TS7 SNORA27.1-201ENST00000362604 124 ntBASIC-1.94□□□□□ -2.72
LINC00643Q86TS7 RNU6-403P-201ENST00000363163 104 ntBASIC-1.94□□□□□ -2.72
LINC00643Q86TS7 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.94□□□□□ -2.72
LINC00643Q86TS7 RNU4-16P-201ENST00000364737 141 ntBASIC-1.94□□□□□ -2.72
LINC00643Q86TS7 SNORD50B-201ENST00000364995 70 ntBASIC-1.94□□□□□ -2.72
LINC00643Q86TS7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.94□□□□□ -2.72
LINC00643Q86TS7 RNU6-387P-201ENST00000411331 105 ntBASIC-1.94□□□□□ -2.72
LINC00643Q86TS7 RN7SKP19-201ENST00000516016 252 ntBASIC-1.94□□□□□ -2.72
LINC00643Q86TS7 RNU6-830P-201ENST00000516353 107 ntBASIC-1.94□□□□□ -2.72
LINC00643Q86TS7 AL133255.1-201ENST00000606374 441 ntBASIC-1.94□□□□□ -2.72
LINC00643Q86TS7 MTND5P18-201ENST00000445624 1801 ntBASIC-1.94□□□□□ -2.72
LINC00643Q86TS7 SNORD56B-201ENST00000384713 71 ntBASIC-1.95□□□□□ -2.72
LINC00643Q86TS7 MIR487A-201ENST00000385009 80 ntBASIC-1.95□□□□□ -2.72
LINC00643Q86TS7 MT-TY-201ENST00000387409 66 ntBASIC-1.95□□□□□ -2.72
LINC00643Q86TS7 AC244505.6-201ENST00000452829 130 ntBASIC-1.95□□□□□ -2.72
LINC00643Q86TS7 MTATP6P14-201ENST00000455189 673 ntBASIC-1.95□□□□□ -2.72
LINC00643Q86TS7 RNU2-13P-201ENST00000515909 113 ntBASIC-1.95□□□□□ -2.72
LINC00643Q86TS7 RNU7-181P-201ENST00000517234 74 ntBASIC-1.95□□□□□ -2.72
LINC00643Q86TS7 MIR3179-1-201ENST00000578940 84 ntBASIC-1.95□□□□□ -2.72
LINC00643Q86TS7 MIR3179-2-201ENST00000579107 84 ntBASIC-1.95□□□□□ -2.72
LINC00643Q86TS7 MIR3179-3-201ENST00000579566 84 ntBASIC-1.95□□□□□ -2.72
LINC00643Q86TS7 MIR3179-4-201ENST00000617599 84 ntBASIC-1.95□□□□□ -2.72
LINC00643Q86TS7 AL445984.1-201ENST00000637834 659 ntBASIC-1.95□□□□□ -2.72
LINC00643Q86TS7 SNORA1.2-201ENST00000365189 134 ntBASIC-1.96□□□□□ -2.72
LINC00643Q86TS7 AL158053.1-201ENST00000441503 453 ntBASIC-1.96□□□□□ -2.72
LINC00643Q86TS7 MTCO2P6-201ENST00000463134 685 ntBASIC-1.96□□□□□ -2.72
LINC00643Q86TS7 GMFBP1-201ENST00000467831 427 ntBASIC-1.96□□□□□ -2.72
LINC00643Q86TS7 AC010655.3-201ENST00000478818 450 ntBASIC-1.96□□□□□ -2.72
LINC00643Q86TS7 RNU7-188P-201ENST00000517063 64 ntBASIC-1.96□□□□□ -2.72
LINC00643Q86TS7 RMST_3.1-201ENST00000611651 109 ntBASIC-1.96□□□□□ -2.72
LINC00643Q86TS7 RNU6-621P-201ENST00000364752 109 ntBASIC-1.97□□□□□ -2.72
LINC00643Q86TS7 MTCO2P27-201ENST00000420740 428 ntBASIC-1.97□□□□□ -2.72
LINC00643Q86TS7 AC236972.2-201ENST00000434979 310 ntBASIC-1.97□□□□□ -2.72
LINC00643Q86TS7 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.97□□□□□ -2.72
LINC00643Q86TS7 RNA5SP54-201ENST00000516951 92 ntBASIC-1.97□□□□□ -2.72
LINC00643Q86TS7 MTND5P34-201ENST00000568888 325 ntBASIC-1.97□□□□□ -2.72
LINC00643Q86TS7 MIR3165-201ENST00000579874 75 ntBASIC-1.97□□□□□ -2.72
LINC00643Q86TS7 MIR4423-201ENST00000580922 80 ntBASIC-1.97□□□□□ -2.72
LINC00643Q86TS7 BNIP3P40-201ENST00000596017 556 ntBASIC-1.97□□□□□ -2.72
LINC00643Q86TS7 AC121334.2-201ENST00000605387 271 ntBASIC-1.97□□□□□ -2.72
LINC00643Q86TS7 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.98□□□□□ -2.73
LINC00643Q86TS7 RNY4P24-201ENST00000362735 96 ntBASIC-1.98□□□□□ -2.73
LINC00643Q86TS7 RNU6-227P-201ENST00000362865 103 ntBASIC-1.98□□□□□ -2.73
LINC00643Q86TS7 RNU6-727P-201ENST00000363592 107 ntBASIC-1.98□□□□□ -2.73
LINC00643Q86TS7 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.98□□□□□ -2.73
LINC00643Q86TS7 RNU6-715P-201ENST00000365204 103 ntBASIC-1.98□□□□□ -2.73
LINC00643Q86TS7 Y_RNA.355-201ENST00000365462 98 ntBASIC-1.98□□□□□ -2.73
LINC00643Q86TS7 RNU6-641P-201ENST00000384006 107 ntBASIC-1.98□□□□□ -2.73
LINC00643Q86TS7 RNU6-39P-201ENST00000384344 107 ntBASIC-1.98□□□□□ -2.73
LINC00643Q86TS7 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.98□□□□□ -2.73
LINC00643Q86TS7 RNA5SP261-201ENST00000410536 106 ntBASIC-1.98□□□□□ -2.73
LINC00643Q86TS7 AL008987.1-201ENST00000415528 237 ntBASIC-1.98□□□□□ -2.73
LINC00643Q86TS7 MTATP6P17-201ENST00000431030 672 ntBASIC-1.98□□□□□ -2.73
LINC00643Q86TS7 AL512286.1-201ENST00000439244 400 ntBASIC-1.98□□□□□ -2.73
LINC00643Q86TS7 SCARNA18B-201ENST00000458806 135 ntBASIC-1.98□□□□□ -2.73
LINC00643Q86TS7 RNU6-1178P-201ENST00000516674 107 ntBASIC-1.98□□□□□ -2.73
LINC00643Q86TS7 MTND2P32-201ENST00000521584 1038 ntBASIC-1.98□□□□□ -2.73
LINC00643Q86TS7 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.98□□□□□ -2.73
LINC00643Q86TS7 POLR3GP1-201ENST00000594073 261 ntBASIC-1.98□□□□□ -2.73
LINC00643Q86TS7 AC018462.2-201ENST00000605375 395 ntBASIC-1.98□□□□□ -2.73
LINC00643Q86TS7 AC026741.1-201ENST00000605892 482 ntBASIC-1.98□□□□□ -2.73
LINC00643Q86TS7 MIR8084-201ENST00000614105 89 ntBASIC-1.98□□□□□ -2.73
LINC00643Q86TS7 AL596211.1-201ENST00000569873 2277 ntBASIC-1.99□□□□□ -2.73
LINC00643Q86TS7 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.99□□□□□ -2.73
LINC00643Q86TS7 RNU6-236P-201ENST00000363886 106 ntBASIC-1.99□□□□□ -2.73
LINC00643Q86TS7 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.99□□□□□ -2.73
LINC00643Q86TS7 Y_RNA.311-201ENST00000365068 96 ntBASIC-1.99□□□□□ -2.73
LINC00643Q86TS7 RNU6-612P-201ENST00000516909 102 ntBASIC-1.99□□□□□ -2.73
LINC00643Q86TS7 MTND3P13-201ENST00000574391 343 ntBASIC-1.99□□□□□ -2.73
LINC00643Q86TS7 MIR4306-201ENST00000583390 91 ntBASIC-1.99□□□□□ -2.73
LINC00643Q86TS7 AC009159.2-201ENST00000617603 606 ntBASIC-1.99□□□□□ -2.73
LINC00643Q86TS7 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.99□□□□□ -2.73
LINC00643Q86TS7 RNU6-207P-201ENST00000384137 107 ntBASIC-2□□□□□ -2.73
LINC00643Q86TS7 RNU6-131P-201ENST00000391144 107 ntBASIC-2□□□□□ -2.73
LINC00643Q86TS7 SNORA25.14-201ENST00000516481 132 ntBASIC-2□□□□□ -2.73
LINC00643Q86TS7 RNA5SP337-201ENST00000517007 109 ntBASIC-2□□□□□ -2.73
LINC00643Q86TS7 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-2□□□□□ -2.73
LINC00643Q86TS7 MTND4LP25-201ENST00000570218 163 ntBASIC-2□□□□□ -2.73
LINC00643Q86TS7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-2□□□□□ -2.73
LINC00643Q86TS7 AC011458.1-201ENST00000604034 617 ntBASIC-2□□□□□ -2.73
LINC00643Q86TS7 RNU6-324P-201ENST00000363957 106 ntBASIC-2.01□□□□□ -2.73
LINC00643Q86TS7 SNORD115-44-201ENST00000365391 82 ntBASIC-2.01□□□□□ -2.73
LINC00643Q86TS7 Y_RNA.480-201ENST00000384364 102 ntBASIC-2.01□□□□□ -2.73
LINC00643Q86TS7 RNU6-883P-201ENST00000384597 107 ntBASIC-2.01□□□□□ -2.73
LINC00643Q86TS7 MIR517B-201ENST00000385102 67 ntBASIC-2.01□□□□□ -2.73
LINC00643Q86TS7 AL590002.1-201ENST00000406554 418 ntBASIC-2.01□□□□□ -2.73
LINC00643Q86TS7 MTND2P9-201ENST00000422293 931 ntBASIC-2.01□□□□□ -2.73
LINC00643Q86TS7 HSPE1P23-201ENST00000509838 286 ntBASIC-2.01□□□□□ -2.73
LINC00643Q86TS7 Y_RNA.676-201ENST00000516393 96 ntBASIC-2.01□□□□□ -2.73
LINC00643Q86TS7 RNU6-201P-201ENST00000517100 61 ntBASIC-2.01□□□□□ -2.73
LINC00643Q86TS7 MIR3684-201ENST00000579779 74 ntBASIC-2.01□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 200.2 ms