Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 SNORD50B-201ENST00000364995 70 ntBASIC-0.56□□□□□ -2.5
USP54Q70EL1 RNY3P5-201ENST00000384127 102 ntBASIC-0.56□□□□□ -2.5
USP54Q70EL1 MIR196A2-201ENST00000385189 110 ntBASIC-0.56□□□□□ -2.5
USP54Q70EL1 RNU6-205P-201ENST00000390858 107 ntBASIC-0.56□□□□□ -2.5
USP54Q70EL1 RNU6-855P-201ENST00000410395 104 ntBASIC-0.56□□□□□ -2.5
USP54Q70EL1 AL354751.2-201ENST00000415471 210 ntBASIC-0.56□□□□□ -2.5
USP54Q70EL1 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.56□□□□□ -2.5
USP54Q70EL1 AC018865.2-201ENST00000423631 129 ntBASIC-0.56□□□□□ -2.5
USP54Q70EL1 AL512326.2-201ENST00000426359 151 ntBASIC-0.56□□□□□ -2.5
USP54Q70EL1 AC073464.1-201ENST00000429823 534 ntBASIC-0.56□□□□□ -2.5
USP54Q70EL1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.57□□□□□ -2.5
USP54Q70EL1 SNORD115-32-201ENST00000364079 82 ntBASIC-0.57□□□□□ -2.5
USP54Q70EL1 MIR570-201ENST00000384917 97 ntBASIC-0.57□□□□□ -2.5
USP54Q70EL1 MIR450B-201ENST00000401182 78 ntBASIC-0.57□□□□□ -2.5
USP54Q70EL1 RNA5SP475-201ENST00000410568 110 ntBASIC-0.57□□□□□ -2.5
USP54Q70EL1 AC093303.1-201ENST00000514549 295 ntBASIC-0.57□□□□□ -2.5
USP54Q70EL1 RNU6-180P-201ENST00000516697 61 ntBASIC-0.57□□□□□ -2.5
USP54Q70EL1 AC104576.1-201ENST00000524225 88 ntBASIC-0.57□□□□□ -2.5
USP54Q70EL1 UBL5P4-201ENST00000562584 236 ntBASIC-0.57□□□□□ -2.5
USP54Q70EL1 AC100830.2-201ENST00000581636 240 ntBASIC-0.57□□□□□ -2.5
USP54Q70EL1 AC121247.2-201ENST00000604776 136 ntBASIC-0.57□□□□□ -2.5
USP54Q70EL1 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.57□□□□□ -2.5
USP54Q70EL1 MIR7844-201ENST00000616161 122 ntBASIC-0.57□□□□□ -2.5
USP54Q70EL1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.57□□□□□ -2.5
USP54Q70EL1 SNORD45.3-201ENST00000363836 72 ntBASIC-0.58□□□□□ -2.5
USP54Q70EL1 RNU6-82P-201ENST00000363970 107 ntBASIC-0.58□□□□□ -2.5
USP54Q70EL1 SNORA1.1-201ENST00000364671 133 ntBASIC-0.58□□□□□ -2.5
USP54Q70EL1 RNU6-214P-201ENST00000384130 107 ntBASIC-0.58□□□□□ -2.5
USP54Q70EL1 RNU6-456P-201ENST00000384493 107 ntBASIC-0.58□□□□□ -2.5
USP54Q70EL1 U8.17-201ENST00000391292 132 ntBASIC-0.58□□□□□ -2.5
USP54Q70EL1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.58□□□□□ -2.5
USP54Q70EL1 SNORD75.1-201ENST00000408373 60 ntBASIC-0.58□□□□□ -2.5
USP54Q70EL1 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.58□□□□□ -2.5
USP54Q70EL1 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.58□□□□□ -2.5
USP54Q70EL1 RNU2-12P-201ENST00000517216 168 ntBASIC-0.58□□□□□ -2.5
USP54Q70EL1 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.59□□□□□ -2.5
USP54Q70EL1 RNU6-117P-201ENST00000365415 107 ntBASIC-0.59□□□□□ -2.5
USP54Q70EL1 SNORD38B-201ENST00000384690 67 ntBASIC-0.59□□□□□ -2.5
USP54Q70EL1 MIR521-1-201ENST00000384902 87 ntBASIC-0.59□□□□□ -2.5
USP54Q70EL1 MCFD2P1-201ENST00000417812 300 ntBASIC-0.59□□□□□ -2.5
USP54Q70EL1 MTCO2P11-201ENST00000431069 680 ntBASIC-0.59□□□□□ -2.5
USP54Q70EL1 AC009961.2-201ENST00000435771 251 ntBASIC-0.59□□□□□ -2.5
USP54Q70EL1 POLR2KP2-201ENST00000438155 177 ntBASIC-0.59□□□□□ -2.5
USP54Q70EL1 ELOCP32-201ENST00000548625 324 ntBASIC-0.59□□□□□ -2.5
USP54Q70EL1 AC133485.4-201ENST00000561835 220 ntBASIC-0.59□□□□□ -2.5
USP54Q70EL1 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.59□□□□□ -2.5
USP54Q70EL1 AC011921.3-201ENST00000605540 361 ntBASIC-0.59□□□□□ -2.5
USP54Q70EL1 MTND1P7-201ENST00000632801 297 ntBASIC-0.59□□□□□ -2.5
USP54Q70EL1 RNU6-181P-201ENST00000363225 107 ntBASIC-0.59□□□□□ -2.5
USP54Q70EL1 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.59□□□□□ -2.5
USP54Q70EL1 MIR522-201ENST00000385071 87 ntBASIC-0.59□□□□□ -2.5
USP54Q70EL1 MIR802-201ENST00000390235 94 ntBASIC-0.59□□□□□ -2.5
USP54Q70EL1 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.59□□□□□ -2.5
USP54Q70EL1 AC015818.7-201ENST00000428754 109 ntBASIC-0.59□□□□□ -2.5
USP54Q70EL1 AC087499.7-201ENST00000441958 109 ntBASIC-0.59□□□□□ -2.5
USP54Q70EL1 RNU6-445P-201ENST00000516949 107 ntBASIC-0.59□□□□□ -2.5
USP54Q70EL1 TUSC7.1-201ENST00000610969 165 ntBASIC-0.59□□□□□ -2.5
USP54Q70EL1 RNU6-925P-201ENST00000384629 104 ntBASIC-0.6□□□□□ -2.51
USP54Q70EL1 SNORD28B-201ENST00000390993 75 ntBASIC-0.6□□□□□ -2.51
USP54Q70EL1 RNU6-131P-201ENST00000391144 107 ntBASIC-0.6□□□□□ -2.51
USP54Q70EL1 RNA5SP163-201ENST00000410304 99 ntBASIC-0.6□□□□□ -2.51
USP54Q70EL1 RNU6-325P-201ENST00000411132 105 ntBASIC-0.6□□□□□ -2.51
USP54Q70EL1 RNU6-195P-201ENST00000411352 109 ntBASIC-0.6□□□□□ -2.51
USP54Q70EL1 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.6□□□□□ -2.51
USP54Q70EL1 RNU7-185P-201ENST00000459215 60 ntBASIC-0.6□□□□□ -2.51
USP54Q70EL1 AP003168.1-201ENST00000530091 307 ntBASIC-0.6□□□□□ -2.51
USP54Q70EL1 AC245014.2-201ENST00000603689 287 ntBASIC-0.6□□□□□ -2.51
USP54Q70EL1 AC246785.4-201ENST00000605374 287 ntBASIC-0.6□□□□□ -2.51
USP54Q70EL1 AL157392.4-201ENST00000609756 345 ntBASIC-0.6□□□□□ -2.51
USP54Q70EL1 AC023510.2-201ENST00000622162 746 ntBASIC-0.6□□□□□ -2.51
USP54Q70EL1 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.6□□□□□ -2.51
USP54Q70EL1 AL391099.1-201ENST00000624635 187 ntBASIC-0.6□□□□□ -2.51
USP54Q70EL1 U6.115-201ENST00000636045 103 ntBASIC-0.6□□□□□ -2.51
USP54Q70EL1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.6□□□□□ -2.51
USP54Q70EL1 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.61□□□□□ -2.51
USP54Q70EL1 RNU6-906P-201ENST00000384700 70 ntBASIC-0.61□□□□□ -2.51
USP54Q70EL1 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.61□□□□□ -2.51
USP54Q70EL1 U8.19-201ENST00000459095 133 ntBASIC-0.61□□□□□ -2.51
USP54Q70EL1 U8.22-201ENST00000459141 133 ntBASIC-0.61□□□□□ -2.51
USP54Q70EL1 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.61□□□□□ -2.51
USP54Q70EL1 AC018710.1-201ENST00000506509 158 ntBASIC-0.61□□□□□ -2.51
USP54Q70EL1 AC091885.1-201ENST00000506658 268 ntBASIC-0.61□□□□□ -2.51
USP54Q70EL1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.61□□□□□ -2.51
USP54Q70EL1 RNU7-129P-201ENST00000516128 62 ntBASIC-0.61□□□□□ -2.51
USP54Q70EL1 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.61□□□□□ -2.51
USP54Q70EL1 AF250324.2-201ENST00000608299 610 ntBASIC-0.61□□□□□ -2.51
USP54Q70EL1 AC022306.2-201ENST00000617563 647 ntBASIC-0.61□□□□□ -2.51
USP54Q70EL1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.61□□□□□ -2.51
USP54Q70EL1 RNU6-281P-201ENST00000384212 103 ntBASIC-0.62□□□□□ -2.51
USP54Q70EL1 RNA5SP300-201ENST00000391197 107 ntBASIC-0.62□□□□□ -2.51
USP54Q70EL1 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.62□□□□□ -2.51
USP54Q70EL1 AC010486.3-201ENST00000511602 785 ntBASIC-0.62□□□□□ -2.51
USP54Q70EL1 MIR3666-201ENST00000607845 111 ntBASIC-0.62□□□□□ -2.51
USP54Q70EL1 RN7SL660P-201ENST00000614852 299 ntBASIC-0.62□□□□□ -2.51
USP54Q70EL1 AL158063.1-201ENST00000615349 536 ntBASIC-0.62□□□□□ -2.51
USP54Q70EL1 MTND5P32-201ENST00000560711 1802 ntBASIC-0.62□□□□□ -2.51
USP54Q70EL1 RNU6-500P-201ENST00000362349 107 ntBASIC-0.62□□□□□ -2.51
USP54Q70EL1 SNORA1.2-201ENST00000365189 134 ntBASIC-0.62□□□□□ -2.51
USP54Q70EL1 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.62□□□□□ -2.51
USP54Q70EL1 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms