Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RNU6-142P-201ENST00000384019 107 ntBASIC-1.75□□□□□ -2.69
VPS13CQ709C8 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.75□□□□□ -2.69
VPS13CQ709C8 AC025459.1-201ENST00000504072 156 ntBASIC-1.75□□□□□ -2.69
VPS13CQ709C8 AC104576.1-201ENST00000524225 88 ntBASIC-1.75□□□□□ -2.69
VPS13CQ709C8 Z99497.2-201ENST00000603634 310 ntBASIC-1.75□□□□□ -2.69
VPS13CQ709C8 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 RNU6-125P-201ENST00000384505 107 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 MIR487B-201ENST00000385021 84 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 USP9YP28-201ENST00000435142 589 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 MIR5704-201ENST00000584029 77 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 AC073648.5-201ENST00000603502 305 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 uc_338.4-201ENST00000616635 176 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 RNU4-15P-201ENST00000362613 141 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 RNU6-188P-201ENST00000364207 107 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 SNORD116-20-201ENST00000384529 92 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 MIR15B-201ENST00000385045 98 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 ZNF114P1-201ENST00000453500 292 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-1.76□□□□□ -2.69
VPS13CQ709C8 AC097460.3-201ENST00000623099 442 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 SNORD115-12-201ENST00000362583 82 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 RNU6-562P-201ENST00000362731 107 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 SNORD115-9-201ENST00000362912 82 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 SNORD115-19-201ENST00000363098 82 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 SNORD115-18-201ENST00000363293 82 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 SNORD115-17-201ENST00000364612 82 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 RNU6-973P-201ENST00000364690 107 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 SNORD115-20-201ENST00000365099 82 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-1.76□□□□□ -2.69
VPS13CQ709C8 AC091965.4-201ENST00000607691 587 ntBASIC-1.76□□□□□ -2.69
VPS13CQ709C8 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.77□□□□□ -2.69
VPS13CQ709C8 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.77□□□□□ -2.69
VPS13CQ709C8 RNU6-714P-201ENST00000516963 103 ntBASIC-1.77□□□□□ -2.69
VPS13CQ709C8 AP001033.2-201ENST00000609701 1003 ntBASIC-1.77□□□□□ -2.69
VPS13CQ709C8 FABP5P15-201ENST00000453566 214 ntBASIC-1.77□□□□□ -2.69
VPS13CQ709C8 MTATP6P14-201ENST00000455189 673 ntBASIC-1.77□□□□□ -2.69
VPS13CQ709C8 RNU2-11P-201ENST00000459191 187 ntBASIC-1.77□□□□□ -2.69
VPS13CQ709C8 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.77□□□□□ -2.69
VPS13CQ709C8 SNORD93-201ENST00000408813 74 ntBASIC-1.77□□□□□ -2.69
VPS13CQ709C8 RNU6-1069P-201ENST00000516612 133 ntBASIC-1.77□□□□□ -2.69
VPS13CQ709C8 RNU6-572P-201ENST00000516724 80 ntBASIC-1.77□□□□□ -2.69
VPS13CQ709C8 MIR181B2-201ENST00000385004 89 ntBASIC-1.78□□□□□ -2.69
VPS13CQ709C8 AC114491.1-201ENST00000416095 246 ntBASIC-1.78□□□□□ -2.69
VPS13CQ709C8 AC074290.1-201ENST00000448883 135 ntBASIC-1.78□□□□□ -2.69
VPS13CQ709C8 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.78□□□□□ -2.69
VPS13CQ709C8 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.78□□□□□ -2.69
VPS13CQ709C8 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.78□□□□□ -2.69
VPS13CQ709C8 SNRPGP10-201ENST00000432323 225 ntBASIC-1.78□□□□□ -2.69
VPS13CQ709C8 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-1.78□□□□□ -2.69
VPS13CQ709C8 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-1.78□□□□□ -2.69
VPS13CQ709C8 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.78□□□□□ -2.69
VPS13CQ709C8 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.78□□□□□ -2.69
VPS13CQ709C8 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-1.78□□□□□ -2.69
VPS13CQ709C8 MTND3P5-201ENST00000512798 333 ntBASIC-1.78□□□□□ -2.69
VPS13CQ709C8 snoR1.1-201ENST00000628177 80 ntBASIC-1.78□□□□□ -2.69
VPS13CQ709C8 AC117470.1-201ENST00000381974 330 ntBASIC-1.79□□□□□ -2.7
VPS13CQ709C8 RNU6-128P-201ENST00000383976 107 ntBASIC-1.79□□□□□ -2.7
VPS13CQ709C8 MIR181A1-201ENST00000385026 110 ntBASIC-1.79□□□□□ -2.7
VPS13CQ709C8 RPS29P13-201ENST00000402041 169 ntBASIC-1.79□□□□□ -2.7
VPS13CQ709C8 RNU4-88P-201ENST00000411220 86 ntBASIC-1.79□□□□□ -2.7
VPS13CQ709C8 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-1.79□□□□□ -2.7
VPS13CQ709C8 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.79□□□□□ -2.7
VPS13CQ709C8 AL353572.1-201ENST00000442490 417 ntBASIC-1.79□□□□□ -2.7
VPS13CQ709C8 MTND1P27-201ENST00000451117 902 ntBASIC-1.79□□□□□ -2.7
VPS13CQ709C8 AL355375.2-201ENST00000574825 175 ntBASIC-1.79□□□□□ -2.7
VPS13CQ709C8 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-1.79□□□□□ -2.7
VPS13CQ709C8 MIR4251-201ENST00000635819 61 ntBASIC-1.79□□□□□ -2.7
VPS13CQ709C8 RNU6-817P-201ENST00000391083 104 ntBASIC-1.79□□□□□ -2.7
VPS13CQ709C8 MIR6740-201ENST00000618268 113 ntBASIC-1.79□□□□□ -2.7
VPS13CQ709C8 SNORA1B-201ENST00000362535 133 ntBASIC-1.8□□□□□ -2.7
VPS13CQ709C8 RNU6-179P-201ENST00000363350 107 ntBASIC-1.8□□□□□ -2.7
VPS13CQ709C8 AC010153.1-201ENST00000432862 727 ntBASIC-1.8□□□□□ -2.7
VPS13CQ709C8 AC087894.1-201ENST00000538359 518 ntBASIC-1.8□□□□□ -2.7
VPS13CQ709C8 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-1.8□□□□□ -2.7
VPS13CQ709C8 Z97988.1-201ENST00000637697 135 ntBASIC-1.8□□□□□ -2.7
VPS13CQ709C8 AC005592.1-201ENST00000566527 1640 ntBASIC-1.8□□□□□ -2.7
VPS13CQ709C8 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.8□□□□□ -2.7
VPS13CQ709C8 MIR452-201ENST00000385020 85 ntBASIC-1.8□□□□□ -2.7
VPS13CQ709C8 AC005002.2-201ENST00000438228 269 ntBASIC-1.8□□□□□ -2.7
VPS13CQ709C8 AC005178.1-201ENST00000508392 440 ntBASIC-1.8□□□□□ -2.7
VPS13CQ709C8 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-1.8□□□□□ -2.7
VPS13CQ709C8 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.8□□□□□ -2.7
VPS13CQ709C8 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.8□□□□□ -2.7
VPS13CQ709C8 AL122001.1-201ENST00000457027 370 ntBASIC-1.8□□□□□ -2.7
VPS13CQ709C8 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.8□□□□□ -2.7
VPS13CQ709C8 DPPA3P3-201ENST00000603842 430 ntBASIC-1.8□□□□□ -2.7
VPS13CQ709C8 RNU6-1025P-201ENST00000410629 104 ntBASIC-1.81□□□□□ -2.7
VPS13CQ709C8 MIR8068-201ENST00000618032 68 ntBASIC-1.81□□□□□ -2.7
VPS13CQ709C8 AL008636.1-201ENST00000625038 1018 ntBASIC-1.81□□□□□ -2.7
VPS13CQ709C8 RNU1-141P-201ENST00000364623 158 ntBASIC-1.81□□□□□ -2.7
VPS13CQ709C8 MIR4748-201ENST00000578076 82 ntBASIC-1.81□□□□□ -2.7
VPS13CQ709C8 MIR3923-201ENST00000579521 83 ntBASIC-1.81□□□□□ -2.7
VPS13CQ709C8 MT-TF-201ENST00000387314 71 ntBASIC-1.81□□□□□ -2.7
VPS13CQ709C8 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.81□□□□□ -2.7
VPS13CQ709C8 RNU6-1078P-201ENST00000364522 103 ntBASIC-1.82□□□□□ -2.7
VPS13CQ709C8 Y_RNA.267-201ENST00000364679 109 ntBASIC-1.82□□□□□ -2.7
VPS13CQ709C8 AC022447.4-201ENST00000504053 364 ntBASIC-1.82□□□□□ -2.7
VPS13CQ709C8 AC023538.1-201ENST00000534576 736 ntBASIC-1.82□□□□□ -2.7
VPS13CQ709C8 MIRLET7C-201ENST00000362160 84 ntBASIC-1.82□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms