Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 MIRLET7C-201ENST00000362160 84 ntBASIC1.23□□□□□ -2.21
RPUSD3Q6P087 Y_RNA.146-201ENST00000363549 102 ntBASIC1.23□□□□□ -2.21
RPUSD3Q6P087 Y_RNA.446-201ENST00000384178 104 ntBASIC1.23□□□□□ -2.21
RPUSD3Q6P087 MIR452-201ENST00000385020 85 ntBASIC1.23□□□□□ -2.21
RPUSD3Q6P087 SNORD12-201ENST00000391002 90 ntBASIC1.23□□□□□ -2.21
RPUSD3Q6P087 RNU2-61P-201ENST00000411069 191 ntBASIC1.23□□□□□ -2.21
RPUSD3Q6P087 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.23□□□□□ -2.21
RPUSD3Q6P087 FGF7P4-201ENST00000509595 295 ntBASIC1.23□□□□□ -2.21
RPUSD3Q6P087 SNORD116-28-201ENST00000516123 91 ntBASIC1.23□□□□□ -2.21
RPUSD3Q6P087 RNU6-277P-201ENST00000516272 106 ntBASIC1.23□□□□□ -2.21
RPUSD3Q6P087 RNU6-917P-201ENST00000516294 104 ntBASIC1.23□□□□□ -2.21
RPUSD3Q6P087 RN7SKP295-201ENST00000517264 153 ntBASIC1.23□□□□□ -2.21
RPUSD3Q6P087 AC011604.1-201ENST00000545978 196 ntBASIC1.23□□□□□ -2.21
RPUSD3Q6P087 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
RPUSD3Q6P087 AC027335.2-201ENST00000624030 375 ntBASIC1.23□□□□□ -2.21
RPUSD3Q6P087 Y_RNA.101-201ENST00000363154 102 ntBASIC1.22□□□□□ -2.21
RPUSD3Q6P087 RNU1-124P-201ENST00000363861 145 ntBASIC1.22□□□□□ -2.21
RPUSD3Q6P087 Y_RNA.191-201ENST00000363972 113 ntBASIC1.22□□□□□ -2.21
RPUSD3Q6P087 RNU6-53P-201ENST00000365367 106 ntBASIC1.22□□□□□ -2.21
RPUSD3Q6P087 SNORD41-201ENST00000386967 70 ntBASIC1.22□□□□□ -2.21
RPUSD3Q6P087 RNU6-1009P-201ENST00000390996 107 ntBASIC1.22□□□□□ -2.21
RPUSD3Q6P087 RPS4XP11-201ENST00000446897 772 ntBASIC1.22□□□□□ -2.21
RPUSD3Q6P087 AL133373.1-201ENST00000497098 94 ntBASIC1.22□□□□□ -2.21
RPUSD3Q6P087 RNA5SP61-201ENST00000516453 100 ntBASIC1.22□□□□□ -2.21
RPUSD3Q6P087 RNA5SP102-201ENST00000516865 106 ntBASIC1.22□□□□□ -2.21
RPUSD3Q6P087 AL117336.2-201ENST00000602435 335 ntBASIC1.22□□□□□ -2.21
RPUSD3Q6P087 AC005972.2-201ENST00000604690 348 ntBASIC1.22□□□□□ -2.21
RPUSD3Q6P087 AC022441.3-201ENST00000605737 136 ntBASIC1.22□□□□□ -2.21
RPUSD3Q6P087 Y_RNA.772-201ENST00000606692 102 ntBASIC1.22□□□□□ -2.21
RPUSD3Q6P087 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
RPUSD3Q6P087 Y_RNA.39-201ENST00000362620 98 ntBASIC1.21□□□□□ -2.22
RPUSD3Q6P087 RNU4-79P-201ENST00000362764 141 ntBASIC1.21□□□□□ -2.22
RPUSD3Q6P087 RNY3P11-201ENST00000364153 102 ntBASIC1.21□□□□□ -2.22
RPUSD3Q6P087 Y_RNA.224-201ENST00000364308 111 ntBASIC1.21□□□□□ -2.22
RPUSD3Q6P087 U8.5-201ENST00000364528 136 ntBASIC1.21□□□□□ -2.22
RPUSD3Q6P087 SNORD116-29-201ENST00000384516 83 ntBASIC1.21□□□□□ -2.22
RPUSD3Q6P087 Y_RNA.526-201ENST00000384572 110 ntBASIC1.21□□□□□ -2.22
RPUSD3Q6P087 SNORA40.6-201ENST00000391153 128 ntBASIC1.21□□□□□ -2.22
RPUSD3Q6P087 AC245047.7-201ENST00000440265 293 ntBASIC1.21□□□□□ -2.22
RPUSD3Q6P087 AC104332.1-201ENST00000440471 797 ntBASIC1.21□□□□□ -2.22
RPUSD3Q6P087 AC005042.3-201ENST00000453230 174 ntBASIC1.21□□□□□ -2.22
RPUSD3Q6P087 Y_RNA.713-201ENST00000517013 96 ntBASIC1.21□□□□□ -2.22
RPUSD3Q6P087 RPS29P30-201ENST00000600975 111 ntBASIC1.21□□□□□ -2.22
RPUSD3Q6P087 AC091895.1-201ENST00000624494 256 ntBASIC1.21□□□□□ -2.22
RPUSD3Q6P087 AC138305.3-201ENST00000624988 240 ntBASIC1.21□□□□□ -2.22
RPUSD3Q6P087 U6.92-201ENST00000636464 89 ntBASIC1.21□□□□□ -2.22
RPUSD3Q6P087 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RPUSD3Q6P087 Y_RNA.122-201ENST00000363331 96 ntBASIC1.2□□□□□ -2.22
RPUSD3Q6P087 RNU6-1283P-201ENST00000365314 105 ntBASIC1.2□□□□□ -2.22
RPUSD3Q6P087 Y_RNA.390-201ENST00000383932 102 ntBASIC1.2□□□□□ -2.22
RPUSD3Q6P087 RNU6-1080P-201ENST00000383982 107 ntBASIC1.2□□□□□ -2.22
RPUSD3Q6P087 MIR15B-201ENST00000385045 98 ntBASIC1.2□□□□□ -2.22
RPUSD3Q6P087 RNU6-910P-201ENST00000390844 107 ntBASIC1.2□□□□□ -2.22
RPUSD3Q6P087 RNU7-152P-201ENST00000458982 64 ntBASIC1.2□□□□□ -2.22
RPUSD3Q6P087 AC055872.1-201ENST00000570978 278 ntBASIC1.2□□□□□ -2.22
RPUSD3Q6P087 AL355375.2-201ENST00000574825 175 ntBASIC1.2□□□□□ -2.22
RPUSD3Q6P087 MIR4452-201ENST00000583004 71 ntBASIC1.2□□□□□ -2.22
RPUSD3Q6P087 MIR4762-201ENST00000585261 75 ntBASIC1.2□□□□□ -2.22
RPUSD3Q6P087 FAM106DP-201ENST00000586416 501 ntBASIC1.2□□□□□ -2.22
RPUSD3Q6P087 AC012676.2-201ENST00000619258 186 ntBASIC1.2□□□□□ -2.22
RPUSD3Q6P087 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
RPUSD3Q6P087 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.2□□□□□ -2.22
RPUSD3Q6P087 Y_RNA.462-201ENST00000384268 102 ntBASIC1.19□□□□□ -2.22
RPUSD3Q6P087 Y_RNA.463-201ENST00000384271 102 ntBASIC1.19□□□□□ -2.22
RPUSD3Q6P087 snoU13.18-201ENST00000459483 104 ntBASIC1.19□□□□□ -2.22
RPUSD3Q6P087 RPS23P4-201ENST00000487908 423 ntBASIC1.19□□□□□ -2.22
RPUSD3Q6P087 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.19□□□□□ -2.22
RPUSD3Q6P087 RNU6-436P-201ENST00000516171 114 ntBASIC1.19□□□□□ -2.22
RPUSD3Q6P087 AC010205.1-201ENST00000616668 449 ntBASIC1.19□□□□□ -2.22
RPUSD3Q6P087 Y_RNA.118-201ENST00000363300 101 ntBASIC1.18□□□□□ -2.22
RPUSD3Q6P087 RNU6-1175P-201ENST00000365200 107 ntBASIC1.18□□□□□ -2.22
RPUSD3Q6P087 SNORA72-201ENST00000384339 132 ntBASIC1.18□□□□□ -2.22
RPUSD3Q6P087 SNORA80D-201ENST00000384488 135 ntBASIC1.18□□□□□ -2.22
RPUSD3Q6P087 Y_RNA.632-201ENST00000459189 102 ntBASIC1.18□□□□□ -2.22
RPUSD3Q6P087 AC048334.1-201ENST00000477975 159 ntBASIC1.18□□□□□ -2.22
RPUSD3Q6P087 RNU7-116P-201ENST00000516940 62 ntBASIC1.18□□□□□ -2.22
RPUSD3Q6P087 SNORA4-201ENST00000584302 138 ntBASIC1.18□□□□□ -2.22
RPUSD3Q6P087 HSPE1P19-201ENST00000603327 295 ntBASIC1.18□□□□□ -2.22
RPUSD3Q6P087 AC136443.5-201ENST00000603741 370 ntBASIC1.18□□□□□ -2.22
RPUSD3Q6P087 AC011476.5-201ENST00000615594 130 ntBASIC1.18□□□□□ -2.22
RPUSD3Q6P087 AL591926.4-201ENST00000616895 298 ntBASIC1.18□□□□□ -2.22
RPUSD3Q6P087 MIR4272-201ENST00000635924 64 ntBASIC1.18□□□□□ -2.22
RPUSD3Q6P087 RNU6-1084P-201ENST00000362498 107 ntBASIC1.17□□□□□ -2.22
RPUSD3Q6P087 RNU1-115P-201ENST00000365329 160 ntBASIC1.17□□□□□ -2.22
RPUSD3Q6P087 MCFD2P1-201ENST00000417812 300 ntBASIC1.17□□□□□ -2.22
RPUSD3Q6P087 AC096644.2-201ENST00000429278 159 ntBASIC1.17□□□□□ -2.22
RPUSD3Q6P087 HMGN2P32-201ENST00000444648 269 ntBASIC1.17□□□□□ -2.22
RPUSD3Q6P087 SNORD19B-201ENST00000459623 84 ntBASIC1.17□□□□□ -2.22
RPUSD3Q6P087 AC004223.1-201ENST00000479840 271 ntBASIC1.17□□□□□ -2.22
RPUSD3Q6P087 RNU6-976P-201ENST00000516086 111 ntBASIC1.17□□□□□ -2.22
RPUSD3Q6P087 AC007742.2-201ENST00000618226 398 ntBASIC1.17□□□□□ -2.22
RPUSD3Q6P087 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
RPUSD3Q6P087 Y_RNA.263-201ENST00000364659 114 ntBASIC1.16□□□□□ -2.22
RPUSD3Q6P087 SNORD116-13-201ENST00000384408 92 ntBASIC1.16□□□□□ -2.22
RPUSD3Q6P087 Y_RNA.570-201ENST00000384750 101 ntBASIC1.16□□□□□ -2.22
RPUSD3Q6P087 MIR19B1-201ENST00000384829 87 ntBASIC1.16□□□□□ -2.22
RPUSD3Q6P087 MIR758-201ENST00000390227 88 ntBASIC1.16□□□□□ -2.22
RPUSD3Q6P087 RNU6-1199P-201ENST00000411249 104 ntBASIC1.16□□□□□ -2.22
RPUSD3Q6P087 AC063976.4-201ENST00000421971 163 ntBASIC1.16□□□□□ -2.22
RPUSD3Q6P087 PIGPP3-201ENST00000425307 415 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms