Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 Y_RNA.639-201ENST00000458981 102 ntBASIC1.35□□□□□ -2.19
KRT39Q6A163 Y_RNA.638-201ENST00000459374 113 ntBASIC1.35□□□□□ -2.19
KRT39Q6A163 AL049830.1-201ENST00000468034 425 ntBASIC1.35□□□□□ -2.19
KRT39Q6A163 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.35□□□□□ -2.19
KRT39Q6A163 Y_RNA.61-201ENST00000362835 102 ntBASIC1.34□□□□□ -2.19
KRT39Q6A163 RNU6-199P-201ENST00000362954 107 ntBASIC1.34□□□□□ -2.19
KRT39Q6A163 Y_RNA.329-201ENST00000365209 107 ntBASIC1.34□□□□□ -2.19
KRT39Q6A163 RNU6-1080P-201ENST00000383982 107 ntBASIC1.34□□□□□ -2.19
KRT39Q6A163 AC005042.3-201ENST00000453230 174 ntBASIC1.34□□□□□ -2.19
KRT39Q6A163 AC093850.1-201ENST00000454121 251 ntBASIC1.34□□□□□ -2.19
KRT39Q6A163 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.34□□□□□ -2.19
KRT39Q6A163 RNU6-917P-201ENST00000516294 104 ntBASIC1.34□□□□□ -2.19
KRT39Q6A163 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KRT39Q6A163 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.34□□□□□ -2.19
KRT39Q6A163 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.34□□□□□ -2.19
KRT39Q6A163 AL050343.2-201ENST00000607338 280 ntBASIC1.34□□□□□ -2.19
KRT39Q6A163 AC022140.2-201ENST00000623500 188 ntBASIC1.34□□□□□ -2.19
KRT39Q6A163 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.34□□□□□ -2.19
KRT39Q6A163 AL161722.3-201ENST00000605789 2983 ntBASIC1.34□□□□□ -2.2
KRT39Q6A163 MIR369-201ENST00000362155 70 ntBASIC1.33□□□□□ -2.2
KRT39Q6A163 SNORD81.1-201ENST00000363064 77 ntBASIC1.33□□□□□ -2.2
KRT39Q6A163 Y_RNA.462-201ENST00000384268 102 ntBASIC1.33□□□□□ -2.2
KRT39Q6A163 MIR653-201ENST00000385279 96 ntBASIC1.33□□□□□ -2.2
KRT39Q6A163 SNORD41-201ENST00000386967 70 ntBASIC1.33□□□□□ -2.2
KRT39Q6A163 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.33□□□□□ -2.2
KRT39Q6A163 MCFD2P1-201ENST00000417812 300 ntBASIC1.33□□□□□ -2.2
KRT39Q6A163 SNORA25.10-201ENST00000515926 124 ntBASIC1.33□□□□□ -2.2
KRT39Q6A163 RNU6-475P-201ENST00000516073 104 ntBASIC1.33□□□□□ -2.2
KRT39Q6A163 RNU6-922P-201ENST00000516753 99 ntBASIC1.33□□□□□ -2.2
KRT39Q6A163 RPS29P30-201ENST00000600975 111 ntBASIC1.33□□□□□ -2.2
KRT39Q6A163 Y_RNA.772-201ENST00000606692 102 ntBASIC1.33□□□□□ -2.2
KRT39Q6A163 PART1_1.1-201ENST00000611761 217 ntBASIC1.33□□□□□ -2.2
KRT39Q6A163 AL353770.2-201ENST00000620024 78 ntBASIC1.33□□□□□ -2.2
KRT39Q6A163 AC091812.1-201ENST00000432235 1948 ntBASIC1.32□□□□□ -2.2
KRT39Q6A163 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
KRT39Q6A163 RNU6-694P-201ENST00000364071 147 ntBASIC1.32□□□□□ -2.2
KRT39Q6A163 Y_RNA.394-201ENST00000383942 103 ntBASIC1.32□□□□□ -2.2
KRT39Q6A163 RNU6-308P-201ENST00000390957 107 ntBASIC1.32□□□□□ -2.2
KRT39Q6A163 RNU6-130P-201ENST00000411112 103 ntBASIC1.32□□□□□ -2.2
KRT39Q6A163 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.32□□□□□ -2.2
KRT39Q6A163 DYNLT3P2-201ENST00000442517 295 ntBASIC1.32□□□□□ -2.2
KRT39Q6A163 RPS20P10-201ENST00000451209 253 ntBASIC1.32□□□□□ -2.2
KRT39Q6A163 AC093852.1-201ENST00000503587 266 ntBASIC1.32□□□□□ -2.2
KRT39Q6A163 RNU6-1170P-201ENST00000515974 106 ntBASIC1.32□□□□□ -2.2
KRT39Q6A163 RN7SKP88-201ENST00000516847 250 ntBASIC1.32□□□□□ -2.2
KRT39Q6A163 RNU6-1116P-201ENST00000517269 99 ntBASIC1.32□□□□□ -2.2
KRT39Q6A163 AC040926.1-201ENST00000530195 238 ntBASIC1.32□□□□□ -2.2
KRT39Q6A163 7SK.8-201ENST00000612110 250 ntBASIC1.32□□□□□ -2.2
KRT39Q6A163 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.32□□□□□ -2.2
KRT39Q6A163 7SK.11-201ENST00000615477 250 ntBASIC1.32□□□□□ -2.2
KRT39Q6A163 7SK.13-201ENST00000622040 250 ntBASIC1.32□□□□□ -2.2
KRT39Q6A163 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.32□□□□□ -2.2
KRT39Q6A163 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRT39Q6A163 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRT39Q6A163 Y_RNA.31-201ENST00000362574 102 ntBASIC1.31□□□□□ -2.2
KRT39Q6A163 Y_RNA.813-201ENST00000364639 102 ntBASIC1.31□□□□□ -2.2
KRT39Q6A163 Y_RNA.331-201ENST00000365267 102 ntBASIC1.31□□□□□ -2.2
KRT39Q6A163 Y_RNA.535-201ENST00000384612 99 ntBASIC1.31□□□□□ -2.2
KRT39Q6A163 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
KRT39Q6A163 MIR1302-11-201ENST00000408051 138 ntBASIC1.31□□□□□ -2.2
KRT39Q6A163 MIR1302-9-201ENST00000408365 138 ntBASIC1.31□□□□□ -2.2
KRT39Q6A163 MIR1302-10-201ENST00000408734 138 ntBASIC1.31□□□□□ -2.2
KRT39Q6A163 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.31□□□□□ -2.2
KRT39Q6A163 MTND4P19-201ENST00000446659 478 ntBASIC1.31□□□□□ -2.2
KRT39Q6A163 AC010655.3-201ENST00000478818 450 ntBASIC1.31□□□□□ -2.2
KRT39Q6A163 RNU7-12P-201ENST00000516030 62 ntBASIC1.31□□□□□ -2.2
KRT39Q6A163 RN7SKP179-201ENST00000516126 217 ntBASIC1.31□□□□□ -2.2
KRT39Q6A163 AC090821.2-201ENST00000523552 176 ntBASIC1.31□□□□□ -2.2
KRT39Q6A163 AC011604.1-201ENST00000545978 196 ntBASIC1.31□□□□□ -2.2
KRT39Q6A163 AC008269.2-201ENST00000561915 1105 ntBASIC1.31□□□□□ -2.2
KRT39Q6A163 AL513534.2-201ENST00000603836 250 ntBASIC1.31□□□□□ -2.2
KRT39Q6A163 MIR1302-2-201ENST00000607096 138 ntBASIC1.31□□□□□ -2.2
KRT39Q6A163 AL157834.3-201ENST00000615543 103 ntBASIC1.31□□□□□ -2.2
KRT39Q6A163 AL591926.4-201ENST00000616895 298 ntBASIC1.31□□□□□ -2.2
KRT39Q6A163 AC068647.2-201ENST00000637380 353 ntBASIC1.31□□□□□ -2.2
KRT39Q6A163 MTND4P29-201ENST00000503122 1372 ntBASIC1.31□□□□□ -2.2
KRT39Q6A163 MIR26B-201ENST00000362251 77 ntBASIC1.3□□□□□ -2.2
KRT39Q6A163 RNA5SP327-201ENST00000362494 101 ntBASIC1.3□□□□□ -2.2
KRT39Q6A163 Y_RNA.431-201ENST00000384086 102 ntBASIC1.3□□□□□ -2.2
KRT39Q6A163 RNU6-937P-201ENST00000384325 106 ntBASIC1.3□□□□□ -2.2
KRT39Q6A163 PMCHL1-202ENST00000423102 261 ntBASIC1.3□□□□□ -2.2
KRT39Q6A163 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.3□□□□□ -2.2
KRT39Q6A163 RNA5SP458-201ENST00000516188 119 ntBASIC1.3□□□□□ -2.2
KRT39Q6A163 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.3□□□□□ -2.2
KRT39Q6A163 DEFB117-201ENST00000602356 141 ntBASIC1.3□□□□□ -2.2
KRT39Q6A163 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRT39Q6A163 U8.5-201ENST00000364528 136 ntBASIC1.29□□□□□ -2.2
KRT39Q6A163 Y_RNA.439-201ENST00000384119 94 ntBASIC1.29□□□□□ -2.2
KRT39Q6A163 SNORD63-201ENST00000384262 68 ntBASIC1.29□□□□□ -2.2
KRT39Q6A163 Y_RNA.471-201ENST00000384312 102 ntBASIC1.29□□□□□ -2.2
KRT39Q6A163 Y_RNA.526-201ENST00000384572 110 ntBASIC1.29□□□□□ -2.2
KRT39Q6A163 Y_RNA.551-201ENST00000384661 102 ntBASIC1.29□□□□□ -2.2
KRT39Q6A163 AL590004.1-201ENST00000405321 300 ntBASIC1.29□□□□□ -2.2
KRT39Q6A163 RNU4-30P-201ENST00000410245 143 ntBASIC1.29□□□□□ -2.2
KRT39Q6A163 RNU6-855P-201ENST00000410395 104 ntBASIC1.29□□□□□ -2.2
KRT39Q6A163 AL390729.2-201ENST00000416137 156 ntBASIC1.29□□□□□ -2.2
KRT39Q6A163 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.29□□□□□ -2.2
KRT39Q6A163 RNU6-237P-201ENST00000515985 71 ntBASIC1.29□□□□□ -2.2
KRT39Q6A163 AC090049.2-201ENST00000550377 109 ntBASIC1.29□□□□□ -2.2
KRT39Q6A163 AC120024.3-201ENST00000603167 156 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 204.4 ms