Protein–RNA interactions for Protein: Q5SQQ9

VAX1, Ventral anterior homeobox 1, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAX1Q5SQQ9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
VAX1Q5SQQ9 SNORA1B-201ENST00000362535 133 ntBASIC0.85□□□□□ -2.27
VAX1Q5SQQ9 RNU1-124P-201ENST00000363861 145 ntBASIC0.85□□□□□ -2.27
VAX1Q5SQQ9 Y_RNA.267-201ENST00000364679 109 ntBASIC0.85□□□□□ -2.27
VAX1Q5SQQ9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.85□□□□□ -2.27
VAX1Q5SQQ9 RNY3P4-201ENST00000384428 101 ntBASIC0.85□□□□□ -2.27
VAX1Q5SQQ9 RNU6-310P-201ENST00000384655 107 ntBASIC0.85□□□□□ -2.27
VAX1Q5SQQ9 U8.16-201ENST00000391279 133 ntBASIC0.85□□□□□ -2.27
VAX1Q5SQQ9 RNU6-370P-201ENST00000411008 104 ntBASIC0.85□□□□□ -2.27
VAX1Q5SQQ9 RNU6-1054P-201ENST00000411293 104 ntBASIC0.85□□□□□ -2.27
VAX1Q5SQQ9 CALM2P4-201ENST00000430810 426 ntBASIC0.85□□□□□ -2.27
VAX1Q5SQQ9 MTND4P17-201ENST00000470444 350 ntBASIC0.85□□□□□ -2.27
VAX1Q5SQQ9 UBL5P1-201ENST00000507979 193 ntBASIC0.85□□□□□ -2.27
VAX1Q5SQQ9 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.85□□□□□ -2.27
VAX1Q5SQQ9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.85□□□□□ -2.27
VAX1Q5SQQ9 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.85□□□□□ -2.27
VAX1Q5SQQ9 MIRLET7C-201ENST00000362160 84 ntBASIC0.84□□□□□ -2.27
VAX1Q5SQQ9 RNU4-79P-201ENST00000362764 141 ntBASIC0.84□□□□□ -2.27
VAX1Q5SQQ9 SNORA2.2-201ENST00000365473 135 ntBASIC0.84□□□□□ -2.27
VAX1Q5SQQ9 RNU6-910P-201ENST00000390844 107 ntBASIC0.84□□□□□ -2.27
VAX1Q5SQQ9 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.84□□□□□ -2.27
VAX1Q5SQQ9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.84□□□□□ -2.27
VAX1Q5SQQ9 AC022493.2-201ENST00000506122 481 ntBASIC0.84□□□□□ -2.27
VAX1Q5SQQ9 RNU6-408P-201ENST00000515910 100 ntBASIC0.84□□□□□ -2.27
VAX1Q5SQQ9 RNU6-470P-201ENST00000515954 104 ntBASIC0.84□□□□□ -2.27
VAX1Q5SQQ9 SNORA20.3-201ENST00000516880 132 ntBASIC0.84□□□□□ -2.27
VAX1Q5SQQ9 AC144568.1-201ENST00000520139 137 ntBASIC0.84□□□□□ -2.27
VAX1Q5SQQ9 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.84□□□□□ -2.27
VAX1Q5SQQ9 CYP3A137P-201ENST00000562436 69 ntBASIC0.84□□□□□ -2.27
VAX1Q5SQQ9 HSPE1P19-201ENST00000603327 295 ntBASIC0.84□□□□□ -2.27
VAX1Q5SQQ9 AC113139.1-201ENST00000605049 239 ntBASIC0.84□□□□□ -2.27
VAX1Q5SQQ9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
VAX1Q5SQQ9 Y_RNA.124-201ENST00000363339 93 ntBASIC0.83□□□□□ -2.28
VAX1Q5SQQ9 SNORD115-30-201ENST00000364117 82 ntBASIC0.83□□□□□ -2.28
VAX1Q5SQQ9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
VAX1Q5SQQ9 AC138393.2-201ENST00000414742 246 ntBASIC0.83□□□□□ -2.28
VAX1Q5SQQ9 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.83□□□□□ -2.28
VAX1Q5SQQ9 FCF1P4-201ENST00000448326 183 ntBASIC0.83□□□□□ -2.28
VAX1Q5SQQ9 AL049830.1-201ENST00000468034 425 ntBASIC0.83□□□□□ -2.28
VAX1Q5SQQ9 RNU7-12P-201ENST00000516030 62 ntBASIC0.83□□□□□ -2.28
VAX1Q5SQQ9 SNORA70.12-201ENST00000516084 153 ntBASIC0.83□□□□□ -2.28
VAX1Q5SQQ9 RNU6-911P-201ENST00000516523 104 ntBASIC0.83□□□□□ -2.28
VAX1Q5SQQ9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.83□□□□□ -2.28
VAX1Q5SQQ9 MIR4661-201ENST00000582720 75 ntBASIC0.83□□□□□ -2.28
VAX1Q5SQQ9 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
VAX1Q5SQQ9 AC099654.14-201ENST00000638599 341 ntBASIC0.83□□□□□ -2.28
VAX1Q5SQQ9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 AC005592.1-201ENST00000566527 1640 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 RNA5SP257-201ENST00000363023 116 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 RNA5SP62-201ENST00000363457 110 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 RNU6-961P-201ENST00000363893 105 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 RNU4-38P-201ENST00000364472 129 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 RNU6-890P-201ENST00000384121 107 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 SNORD41-201ENST00000386967 70 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 SNORD12-201ENST00000391002 90 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 AC063976.4-201ENST00000421971 163 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 AL162725.1-201ENST00000435405 301 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 AC098614.3-201ENST00000438957 440 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 Z98949.2-201ENST00000440996 144 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 RBMX2P4-201ENST00000441256 376 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 AC048334.1-201ENST00000477975 159 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 PRDX4P1-201ENST00000507189 574 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 RNU6-917P-201ENST00000516294 104 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 RNA5SP476-201ENST00000516613 103 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 RNU6-1096P-201ENST00000517089 102 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 AL355073.2-201ENST00000612106 557 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 AC133104.2-201ENST00000615272 193 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 AC004467.1-201ENST00000615678 330 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 AC240442.1-201ENST00000616055 283 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 AL109933.3-201ENST00000619095 188 ntBASIC0.82□□□□□ -2.28
VAX1Q5SQQ9 RNU6-833P-201ENST00000363486 107 ntBASIC0.81□□□□□ -2.28
VAX1Q5SQQ9 RNU2-54P-201ENST00000410299 190 ntBASIC0.81□□□□□ -2.28
VAX1Q5SQQ9 ELOCP24-201ENST00000456370 334 ntBASIC0.81□□□□□ -2.28
VAX1Q5SQQ9 Y_RNA.653-201ENST00000459091 95 ntBASIC0.81□□□□□ -2.28
VAX1Q5SQQ9 HAR1A.1-201ENST00000459583 118 ntBASIC0.81□□□□□ -2.28
VAX1Q5SQQ9 RNU6-120P-201ENST00000516077 103 ntBASIC0.81□□□□□ -2.28
VAX1Q5SQQ9 RNU6-1291P-201ENST00000516591 104 ntBASIC0.81□□□□□ -2.28
VAX1Q5SQQ9 RNU6-1012P-201ENST00000516606 109 ntBASIC0.81□□□□□ -2.28
VAX1Q5SQQ9 AC006380.1-201ENST00000603598 186 ntBASIC0.81□□□□□ -2.28
VAX1Q5SQQ9 AC027279.3-201ENST00000625055 122 ntBASIC0.81□□□□□ -2.28
VAX1Q5SQQ9 AL391516.1-201ENST00000554380 2449 ntBASIC0.8□□□□□ -2.28
VAX1Q5SQQ9 RNU6-490P-201ENST00000362985 107 ntBASIC0.8□□□□□ -2.28
VAX1Q5SQQ9 SNORD114-23-201ENST00000363536 72 ntBASIC0.8□□□□□ -2.28
VAX1Q5SQQ9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.8□□□□□ -2.28
VAX1Q5SQQ9 AC099799.1-201ENST00000439809 192 ntBASIC0.8□□□□□ -2.28
VAX1Q5SQQ9 AC245047.7-201ENST00000440265 293 ntBASIC0.8□□□□□ -2.28
VAX1Q5SQQ9 MTCO3P10-201ENST00000455912 772 ntBASIC0.8□□□□□ -2.28
VAX1Q5SQQ9 AC082651.2-201ENST00000496833 166 ntBASIC0.8□□□□□ -2.28
VAX1Q5SQQ9 RNU6-559P-201ENST00000516151 98 ntBASIC0.8□□□□□ -2.28
VAX1Q5SQQ9 RNA5SP330-201ENST00000517096 96 ntBASIC0.8□□□□□ -2.28
VAX1Q5SQQ9 AC036111.3-201ENST00000526389 112 ntBASIC0.8□□□□□ -2.28
VAX1Q5SQQ9 AC023442.1-201ENST00000531247 422 ntBASIC0.8□□□□□ -2.28
VAX1Q5SQQ9 AC055872.1-201ENST00000570978 278 ntBASIC0.8□□□□□ -2.28
VAX1Q5SQQ9 MIR6857-201ENST00000613267 93 ntBASIC0.8□□□□□ -2.28
VAX1Q5SQQ9 AC010487.4-201ENST00000637027 61 ntBASIC0.8□□□□□ -2.28
VAX1Q5SQQ9 Y_RNA.387-201ENST00000383918 102 ntBASIC0.79□□□□□ -2.28
VAX1Q5SQQ9 RNU6-1297P-201ENST00000384415 104 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms