Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 RNY4P36-201ENST00000391116 96 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 AL355143.1-201ENST00000407101 841 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 MIR548I3-201ENST00000408378 149 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-0.12□□□□□ -2.43
COL7A1Q02388 MTND3P8-201ENST00000412909 339 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 AC092447.3-201ENST00000426027 686 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 MED13P1-201ENST00000428342 171 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 MRPS10P2-201ENST00000431226 381 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 AL353997.1-201ENST00000432936 108 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 AL031667.1-201ENST00000440222 725 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 AL158053.1-201ENST00000441503 453 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.12□□□□□ -2.43
COL7A1Q02388 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU7-73P-201ENST00000458743 63 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 SNRPGP7-201ENST00000469016 106 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 AC026782.1-201ENST00000512952 449 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-1225P-201ENST00000516336 65 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-323P-201ENST00000521915 107 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 AL358944.1-201ENST00000528537 144 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.12□□□□□ -2.43
COL7A1Q02388 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.12□□□□□ -2.43
COL7A1Q02388 MTCO3P23-201ENST00000561363 289 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 AC023827.1-201ENST00000569247 97 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 MIR4300-201ENST00000581016 96 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 MIR4264-201ENST00000583520 66 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 AP000907.4-201ENST00000604143 237 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 FRG1KP-201ENST00000623592 341 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 AL008636.1-201ENST00000625038 1018 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD56B-201ENST00000384713 71 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 MIR196A1-201ENST00000388006 70 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AL136310.1-201ENST00000404926 654 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 MIR1253-201ENST00000408273 105 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 MIR548O-201ENST00000408583 114 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 ELOCP4-201ENST00000420090 333 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AL355994.1-201ENST00000424379 260 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AC137499.1-201ENST00000427602 88 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AC133104.1-201ENST00000429100 218 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 MTCO2P11-201ENST00000431069 680 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 GPR143P-201ENST00000434155 205 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AC004386.2-201ENST00000441858 148 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AC007327.1-201ENST00000447461 264 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 UQCRBP2-201ENST00000447827 297 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 MTND2P3-201ENST00000452458 470 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 MTND1P12-201ENST00000455231 147 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.13□□□□□ -2.43
COL7A1Q02388 AC108729.2-201ENST00000476543 840 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-0.13□□□□□ -2.43
COL7A1Q02388 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.13□□□□□ -2.43
COL7A1Q02388 AC116353.3-201ENST00000511215 249 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 RNU7-156P-201ENST00000517214 74 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-0.13□□□□□ -2.43
COL7A1Q02388 MTND4P33-201ENST00000556706 766 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.13□□□□□ -2.43
COL7A1Q02388 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-0.13□□□□□ -2.43
COL7A1Q02388 MIR3152-201ENST00000579801 74 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 MIR4491-201ENST00000581087 68 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AC245008.1-201ENST00000608123 476 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AC027449.1-201ENST00000608890 407 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AC006441.5-201ENST00000612680 209 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 MIR8066-201ENST00000617280 78 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AC006504.8-201ENST00000621046 635 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AC007494.3-201ENST00000624660 743 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD115-34-201ENST00000362441 82 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD115-12-201ENST00000362583 82 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD115-29-201ENST00000362834 82 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD115-9-201ENST00000362912 82 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD115-21-201ENST00000362963 81 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD115-14-201ENST00000363090 81 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD115-13-201ENST00000363358 82 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORA63.5-201ENST00000363548 123 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD115-11-201ENST00000363616 82 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD115-5-201ENST00000363633 82 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD115-39-201ENST00000363694 82 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD115-4-201ENST00000363810 82 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD115-16-201ENST00000363887 82 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD115-6-201ENST00000363942 82 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD115-42-201ENST00000364273 82 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD115-15-201ENST00000364809 81 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD87-201ENST00000364849 89 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD115-1-201ENST00000364961 82 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD115-26-201ENST00000365067 82 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD115-10-201ENST00000365073 81 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD115-43-201ENST00000365503 82 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD115-36-201ENST00000365629 82 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.13□□□□□ -2.43
COL7A1Q02388 RNU6-190P-201ENST00000384154 102 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 RNU6-541P-201ENST00000384709 110 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 MIR124-2-201ENST00000385081 109 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD41-201ENST00000386967 70 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms