| RAP1A | P62834 | U2.1-201 | ENST00000618978 | 145 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| RAP1A | P62834 | U6.92-201 | ENST00000636464 | 89 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| RAP1A | P62834 | ZNF260-205 | ENST00000593142 | 4047 nt | APPRIS P1 TSL 1 (best) BASIC | 0.77 | □□□□□ -2.29 | | |
| RAP1A | P62834 | SLC25A46-204 | ENST00000504098 | 2345 nt | TSL 5 BASIC | 0.77 | □□□□□ -2.29 | | |
| RAP1A | P62834 | Y_RNA.142-201 | ENST00000363491 | 102 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| RAP1A | P62834 | U8.5-201 | ENST00000364528 | 136 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| RAP1A | P62834 | RNU6-1040P-201 | ENST00000383974 | 107 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| RAP1A | P62834 | Y_RNA.463-201 | ENST00000384271 | 102 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| RAP1A | P62834 | Y_RNA.496-201 | ENST00000384444 | 101 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| RAP1A | P62834 | MIR146A-201 | ENST00000385201 | 99 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| RAP1A | P62834 | SNORD78.2-201 | ENST00000391076 | 69 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| RAP1A | P62834 | PIGPP3-201 | ENST00000425307 | 415 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| RAP1A | P62834 | RNU7-152P-201 | ENST00000458982 | 64 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| RAP1A | P62834 | PRDX4P1-201 | ENST00000507189 | 574 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AC108729.3-201 | ENST00000513484 | 108 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| RAP1A | P62834 | RNU6-237P-201 | ENST00000515985 | 71 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| RAP1A | P62834 | RNU6-911P-201 | ENST00000516523 | 104 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AC144568.1-201 | ENST00000520139 | 137 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| RAP1A | P62834 | MIR4762-201 | ENST00000585261 | 75 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AC005176.2-201 | ENST00000596933 | 147 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AC013244.2-201 | ENST00000603396 | 103 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AC091925.1-201 | ENST00000623204 | 462 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| RAP1A | P62834 | SENP7-201 | ENST00000314261 | 4736 nt | APPRIS ALT2 TSL 1 (best) BASIC | 0.76 | □□□□□ -2.29 | | |
| RAP1A | P62834 | ZNF732-201 | ENST00000419098 | 2193 nt | APPRIS P2 TSL 2 BASIC | 0.76 | □□□□□ -2.29 | | |
| RAP1A | P62834 | RNU6-490P-201 | ENST00000362985 | 107 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| RAP1A | P62834 | Y_RNA.146-201 | ENST00000363549 | 102 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| RAP1A | P62834 | Y_RNA.314-201 | ENST00000365114 | 102 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| RAP1A | P62834 | Y_RNA.387-201 | ENST00000383918 | 102 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AC002429.1-201 | ENST00000437672 | 148 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| RAP1A | P62834 | HMGN1P7-201 | ENST00000491722 | 313 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AC091951.2-201 | ENST00000500762 | 203 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AC108516.1-201 | ENST00000503666 | 257 nt | TSL 2 BASIC | 0.75 | □□□□□ -2.29 | | |
| RAP1A | P62834 | CYCTP-201 | ENST00000504253 | 315 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AC114811.1-201 | ENST00000507207 | 168 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| RAP1A | P62834 | TRMT112P2-201 | ENST00000512910 | 132 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| RAP1A | P62834 | SNORA31.4-201 | ENST00000516049 | 129 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| RAP1A | P62834 | RNU6-351P-201 | ENST00000516097 | 100 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| RAP1A | P62834 | RNU6-947P-201 | ENST00000516264 | 106 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AP003715.1-201 | ENST00000532109 | 435 nt | TSL 3 BASIC | 0.75 | □□□□□ -2.29 | | |
| RAP1A | P62834 | MIR4423-201 | ENST00000580922 | 80 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| RAP1A | P62834 | MIR3192-201 | ENST00000584920 | 77 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| RAP1A | P62834 | FAM71BP1-201 | ENST00000604431 | 523 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| RAP1A | P62834 | ZFAT-AS1_2.1-201 | ENST00000613742 | 201 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AC027279.3-201 | ENST00000625055 | 122 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| RAP1A | P62834 | MIR1302-1-201 | ENST00000637932 | 143 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| RAP1A | P62834 | OSBPL1A-217 | ENST00000638614 | 84 nt | TSL 5 BASIC | 0.75 | □□□□□ -2.29 | | |
| RAP1A | P62834 | ZNF415-224 | ENST00000601493 | 2132 nt | TSL 1 (best) BASIC | 0.74 | □□□□□ -2.29 | | |
| RAP1A | P62834 | C9orf84-205 | ENST00000394779 | 5060 nt | APPRIS ALT2 TSL 2 BASIC | 0.74 | □□□□□ -2.29 | | |
| RAP1A | P62834 | RNU6-1115P-201 | ENST00000362490 | 106 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| RAP1A | P62834 | Y_RNA.336-201 | ENST00000365307 | 109 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| RAP1A | P62834 | RNU6-969P-201 | ENST00000383900 | 105 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| RAP1A | P62834 | MIR891A-201 | ENST00000401237 | 79 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| RAP1A | P62834 | Y_RNA.605-201 | ENST00000410577 | 105 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| RAP1A | P62834 | RNU6-155P-201 | ENST00000516347 | 100 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AC011604.1-201 | ENST00000545978 | 196 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AC005730.3-201 | ENST00000583067 | 366 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| RAP1A | P62834 | FAM106DP-201 | ENST00000586416 | 501 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| RAP1A | P62834 | UBE2V2P2-201 | ENST00000587677 | 504 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| RAP1A | P62834 | PRELID3BP2-201 | ENST00000605362 | 201 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AC022441.3-201 | ENST00000605737 | 136 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AL020996.3-201 | ENST00000606617 | 222 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AC104985.2-201 | ENST00000620598 | 500 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| RAP1A | P62834 | MIR4272-201 | ENST00000635924 | 64 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AL442644.1-201 | ENST00000454390 | 3105 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| RAP1A | P62834 | Y_RNA.27-201 | ENST00000362540 | 103 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | SNORD68-201 | ENST00000363214 | 84 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | SNORA72.1-201 | ENST00000363485 | 129 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | Y_RNA.253-201 | ENST00000364562 | 112 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | Y_RNA.259-201 | ENST00000364619 | 101 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | Y_RNA.570-201 | ENST00000384750 | 101 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | MIR222-201 | ENST00000384992 | 110 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | MIR522-201 | ENST00000385071 | 87 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | SNORA75.2-201 | ENST00000391138 | 150 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | SNORA75.3-201 | ENST00000391231 | 150 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AC099799.1-201 | ENST00000439809 | 192 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | Y_RNA.632-201 | ENST00000459189 | 102 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | SNORD124-201 | ENST00000459577 | 104 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AC005840.1-201 | ENST00000498412 | 377 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | FGF7P4-201 | ENST00000509595 | 295 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | RNU6-322P-201 | ENST00000516010 | 103 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | SNORA70.12-201 | ENST00000516084 | 153 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | RNU6-113P-201 | ENST00000516653 | 101 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AP001825.1-201 | ENST00000534275 | 351 nt | TSL 2 BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AL355375.2-201 | ENST00000574825 | 175 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AC006380.1-201 | ENST00000603598 | 186 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | RBM11P1-201 | ENST00000604951 | 799 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | ST7-AS1_1.1-201 | ENST00000611142 | 116 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AL391903.3-201 | ENST00000612158 | 163 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| RAP1A | P62834 | SNORD81.1-201 | ENST00000363064 | 77 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| RAP1A | P62834 | Y_RNA.230-201 | ENST00000364348 | 109 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| RAP1A | P62834 | RNU6-163P-201 | ENST00000384396 | 106 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| RAP1A | P62834 | SNORD12-201 | ENST00000391002 | 90 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| RAP1A | P62834 | MIR1298-201 | ENST00000408783 | 112 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AF228730.4-201 | ENST00000421457 | 183 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AC063976.4-201 | ENST00000421971 | 163 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AC092813.2-201 | ENST00000434540 | 399 nt | TSL 3 BASIC | 0.72 | □□□□□ -2.29 | | |
| RAP1A | P62834 | RPS20P10-201 | ENST00000451209 | 253 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| RAP1A | P62834 | AC122707.1-201 | ENST00000502882 | 219 nt | TSL 2 BASIC | 0.72 | □□□□□ -2.29 | | |
| RAP1A | P62834 | SNORD111.1-201 | ENST00000516421 | 86 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| RAP1A | P62834 | PNRC2-204 | ENST00000579103 | 171 nt | TSL 2 BASIC | 0.72 | □□□□□ -2.29 | | |