Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 MTND3P8-201ENST00000412909 339 ntBASIC0.64□□□□□ -2.31
VSX2P58304 RPS3AP1-201ENST00000413190 320 ntBASIC0.64□□□□□ -2.31
VSX2P58304 AL035398.1-201ENST00000430869 322 ntBASIC0.64□□□□□ -2.31
VSX2P58304 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
VSX2P58304 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.64□□□□□ -2.31
VSX2P58304 ELOCP24-201ENST00000456370 334 ntBASIC0.64□□□□□ -2.31
VSX2P58304 AC245047.8-201ENST00000456455 284 ntBASIC0.64□□□□□ -2.31
VSX2P58304 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.64□□□□□ -2.31
VSX2P58304 AC011352.1-201ENST00000512300 793 ntBASIC0.64□□□□□ -2.31
VSX2P58304 RNU6-1337P-201ENST00000516525 95 ntBASIC0.64□□□□□ -2.31
VSX2P58304 Y_RNA.708-201ENST00000516950 96 ntBASIC0.64□□□□□ -2.31
VSX2P58304 AC023442.1-201ENST00000531247 422 ntBASIC0.64□□□□□ -2.31
VSX2P58304 AC004812.1-201ENST00000540773 146 ntBASIC0.64□□□□□ -2.31
VSX2P58304 AL591926.4-201ENST00000616895 298 ntBASIC0.64□□□□□ -2.31
VSX2P58304 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.64□□□□□ -2.31
VSX2P58304 AL442644.1-201ENST00000454390 3105 ntBASIC0.64□□□□□ -2.31
VSX2P58304 Y_RNA.88-201ENST00000363029 99 ntBASIC0.63□□□□□ -2.31
VSX2P58304 Y_RNA.101-201ENST00000363154 102 ntBASIC0.63□□□□□ -2.31
VSX2P58304 SNORA25.3-201ENST00000363205 127 ntBASIC0.63□□□□□ -2.31
VSX2P58304 RNU6-99P-201ENST00000364721 107 ntBASIC0.63□□□□□ -2.31
VSX2P58304 Y_RNA.336-201ENST00000365307 109 ntBASIC0.63□□□□□ -2.31
VSX2P58304 Y_RNA.361-201ENST00000365515 120 ntBASIC0.63□□□□□ -2.31
VSX2P58304 RNU6-1215P-201ENST00000384441 102 ntBASIC0.63□□□□□ -2.31
VSX2P58304 MIR200A-201ENST00000384875 90 ntBASIC0.63□□□□□ -2.31
VSX2P58304 MIR520G-201ENST00000385064 90 ntBASIC0.63□□□□□ -2.31
VSX2P58304 RNU4-14P-201ENST00000410858 122 ntBASIC0.63□□□□□ -2.31
VSX2P58304 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.63□□□□□ -2.31
VSX2P58304 AC093019.1-201ENST00000443135 252 ntBASIC0.63□□□□□ -2.31
VSX2P58304 RPL30P15-201ENST00000457129 321 ntBASIC0.63□□□□□ -2.31
VSX2P58304 RNU7-90P-201ENST00000459216 62 ntBASIC0.63□□□□□ -2.31
VSX2P58304 RNA5SP255-201ENST00000516370 107 ntBASIC0.63□□□□□ -2.31
VSX2P58304 RNU6-966P-201ENST00000516479 104 ntBASIC0.63□□□□□ -2.31
VSX2P58304 AP003716.2-201ENST00000528260 108 ntBASIC0.63□□□□□ -2.31
VSX2P58304 AL358944.1-201ENST00000528537 144 ntBASIC0.63□□□□□ -2.31
VSX2P58304 AC068790.6-201ENST00000602558 258 ntBASIC0.63□□□□□ -2.31
VSX2P58304 AC120024.3-201ENST00000603167 156 ntBASIC0.63□□□□□ -2.31
VSX2P58304 AC002553.4-201ENST00000616896 331 ntBASIC0.63□□□□□ -2.31
VSX2P58304 U4.5-201ENST00000617137 123 ntBASIC0.63□□□□□ -2.31
VSX2P58304 AC092794.2-201ENST00000620933 563 ntBASIC0.63□□□□□ -2.31
VSX2P58304 Y_RNA.36-201ENST00000362602 112 ntBASIC0.62□□□□□ -2.31
VSX2P58304 RNA5SP264-201ENST00000363115 107 ntBASIC0.62□□□□□ -2.31
VSX2P58304 SNORD115-30-201ENST00000364117 82 ntBASIC0.62□□□□□ -2.31
VSX2P58304 Y_RNA.393-201ENST00000383936 102 ntBASIC0.62□□□□□ -2.31
VSX2P58304 RNU6-601P-201ENST00000384540 107 ntBASIC0.62□□□□□ -2.31
VSX2P58304 MIR7-2-201ENST00000384970 110 ntBASIC0.62□□□□□ -2.31
VSX2P58304 MIR516B2-201ENST00000385190 85 ntBASIC0.62□□□□□ -2.31
VSX2P58304 RNU6-510P-201ENST00000391239 108 ntBASIC0.62□□□□□ -2.31
VSX2P58304 Y_RNA.621-201ENST00000411065 96 ntBASIC0.62□□□□□ -2.31
VSX2P58304 RPS26P5-201ENST00000418544 335 ntBASIC0.62□□□□□ -2.31
VSX2P58304 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.62□□□□□ -2.31
VSX2P58304 AL162725.1-201ENST00000435405 301 ntBASIC0.62□□□□□ -2.31
VSX2P58304 UBE2V1P7-201ENST00000446395 340 ntBASIC0.62□□□□□ -2.31
VSX2P58304 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.62□□□□□ -2.31
VSX2P58304 RNU7-41P-201ENST00000515917 61 ntBASIC0.62□□□□□ -2.31
VSX2P58304 SNORD111.1-201ENST00000516421 86 ntBASIC0.62□□□□□ -2.31
VSX2P58304 RNU2-12P-201ENST00000517216 168 ntBASIC0.62□□□□□ -2.31
VSX2P58304 AC136628.3-201ENST00000521868 290 ntBASIC0.62□□□□□ -2.31
VSX2P58304 AF235103.2-201ENST00000525753 346 ntBASIC0.62□□□□□ -2.31
VSX2P58304 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.62□□□□□ -2.31
VSX2P58304 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.62□□□□□ -2.31
VSX2P58304 AC023827.1-201ENST00000569247 97 ntBASIC0.62□□□□□ -2.31
VSX2P58304 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.62□□□□□ -2.31
VSX2P58304 AC007014.2-201ENST00000615581 479 ntBASIC0.62□□□□□ -2.31
VSX2P58304 AC087588.2-201ENST00000617667 426 ntBASIC0.62□□□□□ -2.31
VSX2P58304 Y_RNA.330-201ENST00000365230 109 ntBASIC0.61□□□□□ -2.31
VSX2P58304 RNU6-926P-201ENST00000384075 107 ntBASIC0.61□□□□□ -2.31
VSX2P58304 MIR1185-1-201ENST00000408598 86 ntBASIC0.61□□□□□ -2.31
VSX2P58304 AL390729.2-201ENST00000416137 156 ntBASIC0.61□□□□□ -2.31
VSX2P58304 RPS20P10-201ENST00000451209 253 ntBASIC0.61□□□□□ -2.31
VSX2P58304 CYCTP-201ENST00000504253 315 ntBASIC0.61□□□□□ -2.31
VSX2P58304 AC011712.1-201ENST00000588959 234 ntBASIC0.61□□□□□ -2.31
VSX2P58304 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.61□□□□□ -2.31
VSX2P58304 MIR6513-201ENST00000621188 64 ntBASIC0.61□□□□□ -2.31
VSX2P58304 AC027279.3-201ENST00000625055 122 ntBASIC0.61□□□□□ -2.31
VSX2P58304 Y_RNA.482-201ENST00000384377 111 ntBASIC0.6□□□□□ -2.31
VSX2P58304 SNORA75.4-201ENST00000391278 119 ntBASIC0.6□□□□□ -2.31
VSX2P58304 RNU6-1199P-201ENST00000411249 104 ntBASIC0.6□□□□□ -2.31
VSX2P58304 RPL17P19-201ENST00000489069 552 ntBASIC0.6□□□□□ -2.31
VSX2P58304 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.6□□□□□ -2.31
VSX2P58304 AC084782.3-201ENST00000612282 578 ntBASIC0.6□□□□□ -2.31
VSX2P58304 CASC19-280ENST00000642102 1351 ntBASIC0.59□□□□□ -2.31
VSX2P58304 SNORD114-7-201ENST00000362520 77 ntBASIC0.59□□□□□ -2.31
VSX2P58304 RNU6-593P-201ENST00000364716 112 ntBASIC0.59□□□□□ -2.31
VSX2P58304 MLLT10P1-201ENST00000418346 262 ntBASIC0.59□□□□□ -2.31
VSX2P58304 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.59□□□□□ -2.31
VSX2P58304 AC107399.1-201ENST00000451226 265 ntBASIC0.59□□□□□ -2.31
VSX2P58304 MIR2053-201ENST00000459295 91 ntBASIC0.59□□□□□ -2.31
VSX2P58304 RNU6-1012P-201ENST00000516606 109 ntBASIC0.59□□□□□ -2.31
VSX2P58304 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.31
VSX2P58304 RN7SL793P-201ENST00000583259 296 ntBASIC0.59□□□□□ -2.31
VSX2P58304 AC131055.1-201ENST00000584626 316 ntBASIC0.59□□□□□ -2.31
VSX2P58304 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
VSX2P58304 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
VSX2P58304 RNY3P11-201ENST00000364153 102 ntBASIC0.58□□□□□ -2.32
VSX2P58304 RNU6-1310P-201ENST00000384153 107 ntBASIC0.58□□□□□ -2.32
VSX2P58304 MIR216A-201ENST00000385063 110 ntBASIC0.58□□□□□ -2.32
VSX2P58304 MIR522-201ENST00000385071 87 ntBASIC0.58□□□□□ -2.32
VSX2P58304 MIR1277-201ENST00000408536 78 ntBASIC0.58□□□□□ -2.32
VSX2P58304 RNU6-1304P-201ENST00000411374 106 ntBASIC0.58□□□□□ -2.32
VSX2P58304 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 161 ms