Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 Y_RNA.117-201ENST00000363294 101 ntBASIC2.02□□□□□ -2.09
PMS2P54278 SNORA67.3-201ENST00000384366 140 ntBASIC2.02□□□□□ -2.09
PMS2P54278 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.02□□□□□ -2.09
PMS2P54278 Y_RNA.590-201ENST00000410140 107 ntBASIC2.02□□□□□ -2.09
PMS2P54278 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
PMS2P54278 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.02□□□□□ -2.09
PMS2P54278 RNA5SP20-201ENST00000515976 84 ntBASIC2.02□□□□□ -2.09
PMS2P54278 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.02□□□□□ -2.09
PMS2P54278 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.01□□□□□ -2.09
PMS2P54278 RNA5SP276-201ENST00000362580 94 ntBASIC2.01□□□□□ -2.09
PMS2P54278 Y_RNA.124-201ENST00000363339 93 ntBASIC2.01□□□□□ -2.09
PMS2P54278 Y_RNA.200-201ENST00000364018 102 ntBASIC2.01□□□□□ -2.09
PMS2P54278 RNU1-96P-201ENST00000364163 162 ntBASIC2.01□□□□□ -2.09
PMS2P54278 Y_RNA.292-201ENST00000364904 97 ntBASIC2.01□□□□□ -2.09
PMS2P54278 RNU6-117P-201ENST00000365415 107 ntBASIC2.01□□□□□ -2.09
PMS2P54278 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.01□□□□□ -2.09
PMS2P54278 AC010154.1-201ENST00000425857 269 ntBASIC2.01□□□□□ -2.09
PMS2P54278 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.01□□□□□ -2.09
PMS2P54278 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.01□□□□□ -2.09
PMS2P54278 AC011406.1-201ENST00000512440 370 ntBASIC2.01□□□□□ -2.09
PMS2P54278 RNU6-1146P-201ENST00000516282 102 ntBASIC2.01□□□□□ -2.09
PMS2P54278 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.01□□□□□ -2.09
PMS2P54278 Y_RNA.783-201ENST00000613546 102 ntBASIC2.01□□□□□ -2.09
PMS2P54278 ZNF355P-201ENST00000427301 3216 ntBASIC2□□□□□ -2.09
PMS2P54278 Y_RNA.341-201ENST00000365341 102 ntBASIC2□□□□□ -2.09
PMS2P54278 RNU6-211P-201ENST00000384047 107 ntBASIC2□□□□□ -2.09
PMS2P54278 SNORA72.4-201ENST00000384174 132 ntBASIC2□□□□□ -2.09
PMS2P54278 MIR676-201ENST00000390702 67 ntBASIC2□□□□□ -2.09
PMS2P54278 AL023284.1-201ENST00000403956 276 ntBASIC2□□□□□ -2.09
PMS2P54278 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2□□□□□ -2.09
PMS2P54278 MIR1298-201ENST00000408783 112 ntBASIC2□□□□□ -2.09
PMS2P54278 HMGN2P19-201ENST00000425149 265 ntBASIC2□□□□□ -2.09
PMS2P54278 RNU6-138P-201ENST00000515952 107 ntBASIC2□□□□□ -2.09
PMS2P54278 SNORD116-28-201ENST00000516123 91 ntBASIC2□□□□□ -2.09
PMS2P54278 RNU6-1337P-201ENST00000516525 95 ntBASIC2□□□□□ -2.09
PMS2P54278 RNU6-295P-201ENST00000516901 104 ntBASIC2□□□□□ -2.09
PMS2P54278 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2□□□□□ -2.09
PMS2P54278 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2□□□□□ -2.09
PMS2P54278 AL008718.3-201ENST00000610217 321 ntBASIC2□□□□□ -2.09
PMS2P54278 5S_rRNA.11-201ENST00000618635 84 ntBASIC2□□□□□ -2.09
PMS2P54278 U6.73-201ENST00000619194 103 ntBASIC2□□□□□ -2.09
PMS2P54278 5S_rRNA.13-201ENST00000622298 123 ntBASIC2□□□□□ -2.09
PMS2P54278 GS1-279B7.1-204ENST00000641809 378 ntBASIC2□□□□□ -2.09
PMS2P54278 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
PMS2P54278 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
PMS2P54278 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
PMS2P54278 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PMS2P54278 Y_RNA.287-201ENST00000364853 94 ntBASIC1.99□□□□□ -2.09
PMS2P54278 Y_RNA.304-201ENST00000365011 112 ntBASIC1.99□□□□□ -2.09
PMS2P54278 U8.13-201ENST00000390842 128 ntBASIC1.99□□□□□ -2.09
PMS2P54278 RNU6-763P-201ENST00000390865 106 ntBASIC1.99□□□□□ -2.09
PMS2P54278 SNORA48.1-201ENST00000390879 135 ntBASIC1.99□□□□□ -2.09
PMS2P54278 SNORA26.5-201ENST00000391215 123 ntBASIC1.99□□□□□ -2.09
PMS2P54278 RNA5SP212-201ENST00000391223 107 ntBASIC1.99□□□□□ -2.09
PMS2P54278 SNORA26.9-201ENST00000391322 122 ntBASIC1.99□□□□□ -2.09
PMS2P54278 AL117342.1-201ENST00000404861 406 ntBASIC1.99□□□□□ -2.09
PMS2P54278 RNU6-855P-201ENST00000410395 104 ntBASIC1.99□□□□□ -2.09
PMS2P54278 RNA5SP501-201ENST00000410990 112 ntBASIC1.99□□□□□ -2.09
PMS2P54278 Y_RNA.626-201ENST00000411288 95 ntBASIC1.99□□□□□ -2.09
PMS2P54278 RPS20P10-201ENST00000451209 253 ntBASIC1.99□□□□□ -2.09
PMS2P54278 ATP5J2P3-201ENST00000451550 258 ntBASIC1.99□□□□□ -2.09
PMS2P54278 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.99□□□□□ -2.09
PMS2P54278 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.99□□□□□ -2.09
PMS2P54278 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.99□□□□□ -2.09
PMS2P54278 AL137100.2-201ENST00000555786 315 ntBASIC1.99□□□□□ -2.09
PMS2P54278 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.99□□□□□ -2.09
PMS2P54278 MIR338-201ENST00000636369 67 ntBASIC1.99□□□□□ -2.09
PMS2P54278 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
PMS2P54278 AC245060.5-201ENST00000610778 3293 ntBASIC1.98□□□□□ -2.09
PMS2P54278 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PMS2P54278 snoU2-30.2-201ENST00000362805 70 ntBASIC1.98□□□□□ -2.09
PMS2P54278 Y_RNA.83-201ENST00000363005 113 ntBASIC1.98□□□□□ -2.09
PMS2P54278 RNU1-22P-201ENST00000363334 158 ntBASIC1.98□□□□□ -2.09
PMS2P54278 Y_RNA.172-201ENST00000363765 102 ntBASIC1.98□□□□□ -2.09
PMS2P54278 Y_RNA.199-201ENST00000364014 102 ntBASIC1.98□□□□□ -2.09
PMS2P54278 Y_RNA.274-201ENST00000364714 101 ntBASIC1.98□□□□□ -2.09
PMS2P54278 HMGN2P34-201ENST00000437647 269 ntBASIC1.98□□□□□ -2.09
PMS2P54278 U8.19-201ENST00000459095 133 ntBASIC1.98□□□□□ -2.09
PMS2P54278 Y_RNA.679-201ENST00000516416 91 ntBASIC1.98□□□□□ -2.09
PMS2P54278 MIR4299-201ENST00000577899 72 ntBASIC1.98□□□□□ -2.09
PMS2P54278 SNRPGP19-201ENST00000603826 189 ntBASIC1.98□□□□□ -2.09
PMS2P54278 AL773524.1-201ENST00000614065 229 ntBASIC1.98□□□□□ -2.09
PMS2P54278 AC013791.1-201ENST00000616619 62 ntBASIC1.98□□□□□ -2.09
PMS2P54278 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
PMS2P54278 RNU6-899P-201ENST00000363947 107 ntBASIC1.97□□□□□ -2.09
PMS2P54278 RNU6-407P-201ENST00000365280 104 ntBASIC1.97□□□□□ -2.09
PMS2P54278 RNU6-1323P-201ENST00000384025 107 ntBASIC1.97□□□□□ -2.09
PMS2P54278 SNORA8-201ENST00000384574 139 ntBASIC1.97□□□□□ -2.09
PMS2P54278 RPL31P63-201ENST00000422565 375 ntBASIC1.97□□□□□ -2.09
PMS2P54278 AL445646.1-201ENST00000431784 216 ntBASIC1.97□□□□□ -2.09
PMS2P54278 Z98949.2-201ENST00000440996 144 ntBASIC1.97□□□□□ -2.09
PMS2P54278 RPL23AP6-201ENST00000446637 472 ntBASIC1.97□□□□□ -2.09
PMS2P54278 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.97□□□□□ -2.09
PMS2P54278 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.97□□□□□ -2.09
PMS2P54278 AC097462.1-201ENST00000514125 324 ntBASIC1.97□□□□□ -2.09
PMS2P54278 Y_RNA.676-201ENST00000516393 96 ntBASIC1.97□□□□□ -2.09
PMS2P54278 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.97□□□□□ -2.09
PMS2P54278 CBX3P4-201ENST00000538909 354 ntBASIC1.97□□□□□ -2.09
PMS2P54278 MIR5692C2-201ENST00000577959 77 ntBASIC1.97□□□□□ -2.09
PMS2P54278 MIR5688-201ENST00000580619 83 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 327.3 ms