Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 RNU6-351P-201ENST00000516097 100 ntBASIC0.77□□□□□ -2.29
CXCL12P48061 RNU6-1278P-201ENST00000516130 107 ntBASIC0.77□□□□□ -2.29
CXCL12P48061 RNU6-947P-201ENST00000516264 106 ntBASIC0.77□□□□□ -2.29
CXCL12P48061 RNU6-1116P-201ENST00000517269 99 ntBASIC0.77□□□□□ -2.29
CXCL12P48061 AC023442.1-201ENST00000531247 422 ntBASIC0.77□□□□□ -2.29
CXCL12P48061 AC055872.1-201ENST00000570978 278 ntBASIC0.77□□□□□ -2.29
CXCL12P48061 AL117336.2-201ENST00000602435 335 ntBASIC0.77□□□□□ -2.29
CXCL12P48061 TPTEP1-208ENST00000636884 213 ntBASIC0.77□□□□□ -2.29
CXCL12P48061 MIR924-201ENST00000638017 53 ntBASIC0.77□□□□□ -2.29
CXCL12P48061 Y_RNA.166-201ENST00000363730 102 ntBASIC0.76□□□□□ -2.29
CXCL12P48061 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
CXCL12P48061 SNORD81.2-201ENST00000365153 76 ntBASIC0.76□□□□□ -2.29
CXCL12P48061 RNU6-310P-201ENST00000384655 107 ntBASIC0.76□□□□□ -2.29
CXCL12P48061 MIR562-201ENST00000384894 95 ntBASIC0.76□□□□□ -2.29
CXCL12P48061 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.76□□□□□ -2.29
CXCL12P48061 RNU6-1156P-201ENST00000410365 100 ntBASIC0.76□□□□□ -2.29
CXCL12P48061 Z98949.2-201ENST00000440996 144 ntBASIC0.76□□□□□ -2.29
CXCL12P48061 Y_RNA.635-201ENST00000459041 101 ntBASIC0.76□□□□□ -2.29
CXCL12P48061 AL049830.1-201ENST00000468034 425 ntBASIC0.76□□□□□ -2.29
CXCL12P48061 AC022493.2-201ENST00000506122 481 ntBASIC0.76□□□□□ -2.29
CXCL12P48061 RNU7-28P-201ENST00000516759 62 ntBASIC0.76□□□□□ -2.29
CXCL12P48061 RNU6-1096P-201ENST00000517089 102 ntBASIC0.76□□□□□ -2.29
CXCL12P48061 AC090049.2-201ENST00000550377 109 ntBASIC0.76□□□□□ -2.29
CXCL12P48061 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.76□□□□□ -2.29
CXCL12P48061 AC092794.1-201ENST00000612734 582 ntBASIC0.76□□□□□ -2.29
CXCL12P48061 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.76□□□□□ -2.29
CXCL12P48061 AC004467.1-201ENST00000615678 330 ntBASIC0.76□□□□□ -2.29
CXCL12P48061 U6atac.1-201ENST00000616025 117 ntBASIC0.76□□□□□ -2.29
CXCL12P48061 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CXCL12P48061 RNU6-1188P-201ENST00000363795 107 ntBASIC0.75□□□□□ -2.29
CXCL12P48061 RNY3P11-201ENST00000364153 102 ntBASIC0.75□□□□□ -2.29
CXCL12P48061 SNORA2.2-201ENST00000365473 135 ntBASIC0.75□□□□□ -2.29
CXCL12P48061 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
CXCL12P48061 RNU6-910P-201ENST00000390844 107 ntBASIC0.75□□□□□ -2.29
CXCL12P48061 SNORA69.1-201ENST00000390904 137 ntBASIC0.75□□□□□ -2.29
CXCL12P48061 RNA5SP482-201ENST00000391269 118 ntBASIC0.75□□□□□ -2.29
CXCL12P48061 SNORA75.6-201ENST00000391318 127 ntBASIC0.75□□□□□ -2.29
CXCL12P48061 AL451046.2-201ENST00000403074 277 ntBASIC0.75□□□□□ -2.29
CXCL12P48061 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.75□□□□□ -2.29
CXCL12P48061 Y_RNA.592-201ENST00000410274 109 ntBASIC0.75□□□□□ -2.29
CXCL12P48061 RNA5SP511-201ENST00000410487 115 ntBASIC0.75□□□□□ -2.29
CXCL12P48061 Y_RNA.599-201ENST00000410489 109 ntBASIC0.75□□□□□ -2.29
CXCL12P48061 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.75□□□□□ -2.29
CXCL12P48061 MTND4P28-201ENST00000426217 387 ntBASIC0.75□□□□□ -2.29
CXCL12P48061 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.75□□□□□ -2.29
CXCL12P48061 MTND1P2-201ENST00000430604 821 ntBASIC0.75□□□□□ -2.29
CXCL12P48061 AC104332.1-201ENST00000440471 797 ntBASIC0.75□□□□□ -2.29
CXCL12P48061 RPL39P28-201ENST00000465655 155 ntBASIC0.75□□□□□ -2.29
CXCL12P48061 SNORA70.22-201ENST00000517160 124 ntBASIC0.75□□□□□ -2.29
CXCL12P48061 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.75□□□□□ -2.29
CXCL12P48061 Y_RNA.115-201ENST00000363272 98 ntBASIC0.74□□□□□ -2.29
CXCL12P48061 SNORD115-30-201ENST00000364117 82 ntBASIC0.74□□□□□ -2.29
CXCL12P48061 RNU6-890P-201ENST00000384121 107 ntBASIC0.74□□□□□ -2.29
CXCL12P48061 RNU6-1310P-201ENST00000384153 107 ntBASIC0.74□□□□□ -2.29
CXCL12P48061 Y_RNA.577-201ENST00000384794 101 ntBASIC0.74□□□□□ -2.29
CXCL12P48061 MIR520G-201ENST00000385064 90 ntBASIC0.74□□□□□ -2.29
CXCL12P48061 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.74□□□□□ -2.29
CXCL12P48061 RNU6-1054P-201ENST00000411293 104 ntBASIC0.74□□□□□ -2.29
CXCL12P48061 RPEP5-201ENST00000441137 268 ntBASIC0.74□□□□□ -2.29
CXCL12P48061 HSPE1P13-201ENST00000451143 297 ntBASIC0.74□□□□□ -2.29
CXCL12P48061 RPL30P15-201ENST00000457129 321 ntBASIC0.74□□□□□ -2.29
CXCL12P48061 RNU7-169P-201ENST00000459456 61 ntBASIC0.74□□□□□ -2.29
CXCL12P48061 SNORD116-28-201ENST00000516123 91 ntBASIC0.74□□□□□ -2.29
CXCL12P48061 RNU6-264P-201ENST00000517134 104 ntBASIC0.74□□□□□ -2.29
CXCL12P48061 MIR2355-201ENST00000517199 87 ntBASIC0.74□□□□□ -2.29
CXCL12P48061 RNU2-12P-201ENST00000517216 168 ntBASIC0.74□□□□□ -2.29
CXCL12P48061 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.74□□□□□ -2.29
CXCL12P48061 AC022306.2-201ENST00000617563 647 ntBASIC0.74□□□□□ -2.29
CXCL12P48061 AL391516.1-201ENST00000554380 2449 ntBASIC0.74□□□□□ -2.29
CXCL12P48061 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.73□□□□□ -2.29
CXCL12P48061 RNA5SP347-201ENST00000362445 119 ntBASIC0.73□□□□□ -2.29
CXCL12P48061 RNU4-79P-201ENST00000362764 141 ntBASIC0.73□□□□□ -2.29
CXCL12P48061 Y_RNA.101-201ENST00000363154 102 ntBASIC0.73□□□□□ -2.29
CXCL12P48061 RNU1-124P-201ENST00000363861 145 ntBASIC0.73□□□□□ -2.29
CXCL12P48061 Y_RNA.361-201ENST00000365515 120 ntBASIC0.73□□□□□ -2.29
CXCL12P48061 Y_RNA.363-201ENST00000365529 113 ntBASIC0.73□□□□□ -2.29
CXCL12P48061 AL354751.2-201ENST00000415471 210 ntBASIC0.73□□□□□ -2.29
CXCL12P48061 MRPS18CP6-201ENST00000423587 223 ntBASIC0.73□□□□□ -2.29
CXCL12P48061 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.73□□□□□ -2.29
CXCL12P48061 AC245047.7-201ENST00000440265 293 ntBASIC0.73□□□□□ -2.29
CXCL12P48061 SUMO1P2-201ENST00000452524 304 ntBASIC0.73□□□□□ -2.29
CXCL12P48061 MTCO3P10-201ENST00000455912 772 ntBASIC0.73□□□□□ -2.29
CXCL12P48061 ELOCP24-201ENST00000456370 334 ntBASIC0.73□□□□□ -2.29
CXCL12P48061 RNU6-322P-201ENST00000516010 103 ntBASIC0.73□□□□□ -2.29
CXCL12P48061 RNU6-1337P-201ENST00000516525 95 ntBASIC0.73□□□□□ -2.29
CXCL12P48061 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.73□□□□□ -2.29
CXCL12P48061 MIR5690-201ENST00000583739 73 ntBASIC0.73□□□□□ -2.29
CXCL12P48061 SNORD114-7-201ENST00000362520 77 ntBASIC0.72□□□□□ -2.29
CXCL12P48061 Y_RNA.474-201ENST00000384341 102 ntBASIC0.72□□□□□ -2.29
CXCL12P48061 Y_RNA.505-201ENST00000384489 102 ntBASIC0.72□□□□□ -2.29
CXCL12P48061 MIR526A1-201ENST00000384897 85 ntBASIC0.72□□□□□ -2.29
CXCL12P48061 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.72□□□□□ -2.29
CXCL12P48061 RNU6-470P-201ENST00000515954 104 ntBASIC0.72□□□□□ -2.29
CXCL12P48061 SNORA31.4-201ENST00000516049 129 ntBASIC0.72□□□□□ -2.29
CXCL12P48061 AL358944.1-201ENST00000528537 144 ntBASIC0.72□□□□□ -2.29
CXCL12P48061 SNORD68-201ENST00000363214 84 ntBASIC0.71□□□□□ -2.3
CXCL12P48061 Y_RNA.172-201ENST00000363765 102 ntBASIC0.71□□□□□ -2.3
CXCL12P48061 SNORD116-13-201ENST00000384408 92 ntBASIC0.71□□□□□ -2.3
CXCL12P48061 AL031003.1-201ENST00000404229 172 ntBASIC0.71□□□□□ -2.3
CXCL12P48061 Y_RNA.621-201ENST00000411065 96 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms