Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MTND4P17-201ENST00000470444 350 ntBASIC0.61□□□□□ -2.31
SSR1P43307 AC069439.1-201ENST00000494739 167 ntBASIC0.61□□□□□ -2.31
SSR1P43307 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.61□□□□□ -2.31
SSR1P43307 RN7SKP164-201ENST00000516138 266 ntBASIC0.61□□□□□ -2.31
SSR1P43307 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
SSR1P43307 SEPT14P17-201ENST00000617978 177 ntBASIC0.61□□□□□ -2.31
SSR1P43307 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
SSR1P43307 Y_RNA.88-201ENST00000363029 99 ntBASIC0.6□□□□□ -2.31
SSR1P43307 Y_RNA.253-201ENST00000364562 112 ntBASIC0.6□□□□□ -2.31
SSR1P43307 RNU6-110P-201ENST00000384508 104 ntBASIC0.6□□□□□ -2.31
SSR1P43307 RNU4-14P-201ENST00000410858 122 ntBASIC0.6□□□□□ -2.31
SSR1P43307 SNRPGP10-201ENST00000432323 225 ntBASIC0.6□□□□□ -2.31
SSR1P43307 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.6□□□□□ -2.31
SSR1P43307 Y_RNA.708-201ENST00000516950 96 ntBASIC0.6□□□□□ -2.31
SSR1P43307 RNU2-12P-201ENST00000517216 168 ntBASIC0.6□□□□□ -2.31
SSR1P43307 AP003484.1-201ENST00000530974 250 ntBASIC0.6□□□□□ -2.31
SSR1P43307 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.6□□□□□ -2.31
SSR1P43307 MIR4764-201ENST00000580680 88 ntBASIC0.6□□□□□ -2.31
SSR1P43307 AC011476.5-201ENST00000615594 130 ntBASIC0.6□□□□□ -2.31
SSR1P43307 AC092794.2-201ENST00000620933 563 ntBASIC0.6□□□□□ -2.31
SSR1P43307 AC027279.3-201ENST00000625055 122 ntBASIC0.6□□□□□ -2.31
SSR1P43307 MIR452-201ENST00000385020 85 ntBASIC0.59□□□□□ -2.31
SSR1P43307 AL031003.1-201ENST00000404229 172 ntBASIC0.59□□□□□ -2.31
SSR1P43307 RNU6-720P-201ENST00000516363 108 ntBASIC0.59□□□□□ -2.31
SSR1P43307 SNORA74.3-201ENST00000517108 154 ntBASIC0.59□□□□□ -2.31
SSR1P43307 AL358944.1-201ENST00000528537 144 ntBASIC0.59□□□□□ -2.31
SSR1P43307 MIR3684-201ENST00000579779 74 ntBASIC0.59□□□□□ -2.31
SSR1P43307 AC012433.1-201ENST00000588916 398 ntBASIC0.59□□□□□ -2.31
SSR1P43307 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.59□□□□□ -2.31
SSR1P43307 MIR8070-201ENST00000616510 88 ntBASIC0.59□□□□□ -2.31
SSR1P43307 Y_RNA.191-201ENST00000363972 113 ntBASIC0.58□□□□□ -2.32
SSR1P43307 Y_RNA.339-201ENST00000365325 102 ntBASIC0.58□□□□□ -2.32
SSR1P43307 MIR570-201ENST00000384917 97 ntBASIC0.58□□□□□ -2.32
SSR1P43307 MTCO2P27-201ENST00000420740 428 ntBASIC0.58□□□□□ -2.32
SSR1P43307 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.58□□□□□ -2.32
SSR1P43307 FABP5P4-201ENST00000437203 171 ntBASIC0.58□□□□□ -2.32
SSR1P43307 UBE2V1P7-201ENST00000446395 340 ntBASIC0.58□□□□□ -2.32
SSR1P43307 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.58□□□□□ -2.32
SSR1P43307 SNORA70.12-201ENST00000516084 153 ntBASIC0.58□□□□□ -2.32
SSR1P43307 SNORD45.4-201ENST00000516629 73 ntBASIC0.58□□□□□ -2.32
SSR1P43307 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.58□□□□□ -2.32
SSR1P43307 AC084782.3-201ENST00000612282 578 ntBASIC0.58□□□□□ -2.32
SSR1P43307 MIR6504-201ENST00000613520 61 ntBASIC0.58□□□□□ -2.32
SSR1P43307 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
SSR1P43307 AC090517.2-201ENST00000614966 680 ntBASIC0.58□□□□□ -2.32
SSR1P43307 Y_RNA.4-201ENST00000362333 112 ntBASIC0.57□□□□□ -2.32
SSR1P43307 RNU6-1084P-201ENST00000362498 107 ntBASIC0.57□□□□□ -2.32
SSR1P43307 SNORD18A-201ENST00000363753 72 ntBASIC0.57□□□□□ -2.32
SSR1P43307 SNORD50B-201ENST00000364995 70 ntBASIC0.57□□□□□ -2.32
SSR1P43307 SNORD14.1-201ENST00000365609 90 ntBASIC0.57□□□□□ -2.32
SSR1P43307 MIR522-201ENST00000385071 87 ntBASIC0.57□□□□□ -2.32
SSR1P43307 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
SSR1P43307 SNORD28B-201ENST00000390993 75 ntBASIC0.57□□□□□ -2.32
SSR1P43307 SNORA75.4-201ENST00000391278 119 ntBASIC0.57□□□□□ -2.32
SSR1P43307 RNA5SP118-201ENST00000410385 109 ntBASIC0.57□□□□□ -2.32
SSR1P43307 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.57□□□□□ -2.32
SSR1P43307 MIR2053-201ENST00000459295 91 ntBASIC0.57□□□□□ -2.32
SSR1P43307 RNU7-169P-201ENST00000459456 61 ntBASIC0.57□□□□□ -2.32
SSR1P43307 AC113410.1-201ENST00000505029 247 ntBASIC0.57□□□□□ -2.32
SSR1P43307 RNU6-1012P-201ENST00000516606 109 ntBASIC0.57□□□□□ -2.32
SSR1P43307 AC036111.3-201ENST00000526389 112 ntBASIC0.57□□□□□ -2.32
SSR1P43307 EIF1P4-201ENST00000572664 335 ntBASIC0.57□□□□□ -2.32
SSR1P43307 AC011195.1-201ENST00000578177 177 ntBASIC0.57□□□□□ -2.32
SSR1P43307 MIR4714-201ENST00000580728 77 ntBASIC0.57□□□□□ -2.32
SSR1P43307 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
SSR1P43307 AC087588.2-201ENST00000617667 426 ntBASIC0.57□□□□□ -2.32
SSR1P43307 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.57□□□□□ -2.32
SSR1P43307 Y_RNA.148-201ENST00000363557 117 ntBASIC0.56□□□□□ -2.32
SSR1P43307 RNU6-324P-201ENST00000363957 106 ntBASIC0.56□□□□□ -2.32
SSR1P43307 U8.5-201ENST00000364528 136 ntBASIC0.56□□□□□ -2.32
SSR1P43307 Y_RNA.361-201ENST00000365515 120 ntBASIC0.56□□□□□ -2.32
SSR1P43307 Y_RNA.573-201ENST00000384763 105 ntBASIC0.56□□□□□ -2.32
SSR1P43307 MIR136-201ENST00000385207 82 ntBASIC0.56□□□□□ -2.32
SSR1P43307 MIR1302-7-201ENST00000408841 72 ntBASIC0.56□□□□□ -2.32
SSR1P43307 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
SSR1P43307 MTND4LP26-201ENST00000518144 282 ntBASIC0.56□□□□□ -2.32
SSR1P43307 MIR4452-201ENST00000583004 71 ntBASIC0.56□□□□□ -2.32
SSR1P43307 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.56□□□□□ -2.32
SSR1P43307 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.56□□□□□ -2.32
SSR1P43307 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.56□□□□□ -2.32
SSR1P43307 SNORA25.9-201ENST00000365087 128 ntBASIC0.55□□□□□ -2.32
SSR1P43307 RNU6-945P-201ENST00000383947 107 ntBASIC0.55□□□□□ -2.32
SSR1P43307 RNU6-767P-201ENST00000384132 107 ntBASIC0.55□□□□□ -2.32
SSR1P43307 RNU6-1105P-201ENST00000384774 107 ntBASIC0.55□□□□□ -2.32
SSR1P43307 MTND3P8-201ENST00000412909 339 ntBASIC0.55□□□□□ -2.32
SSR1P43307 AC107399.1-201ENST00000451226 265 ntBASIC0.55□□□□□ -2.32
SSR1P43307 SNORD123-201ENST00000459473 70 ntBASIC0.55□□□□□ -2.32
SSR1P43307 RPL17P19-201ENST00000489069 552 ntBASIC0.55□□□□□ -2.32
SSR1P43307 MIR4762-201ENST00000585261 75 ntBASIC0.55□□□□□ -2.32
SSR1P43307 PISRT1.1-201ENST00000616930 107 ntBASIC0.55□□□□□ -2.32
SSR1P43307 AL442644.1-201ENST00000454390 3105 ntBASIC0.55□□□□□ -2.32
SSR1P43307 RNU6-708P-201ENST00000384217 107 ntBASIC0.54□□□□□ -2.32
SSR1P43307 RNU6-1215P-201ENST00000384441 102 ntBASIC0.54□□□□□ -2.32
SSR1P43307 RNU6-994P-201ENST00000410507 111 ntBASIC0.54□□□□□ -2.32
SSR1P43307 RNA5SP222-201ENST00000411039 105 ntBASIC0.54□□□□□ -2.32
SSR1P43307 RNU6-1199P-201ENST00000411249 104 ntBASIC0.54□□□□□ -2.32
SSR1P43307 AC244098.3-201ENST00000424803 96 ntBASIC0.54□□□□□ -2.32
SSR1P43307 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.54□□□□□ -2.32
SSR1P43307 AC011352.1-201ENST00000512300 793 ntBASIC0.54□□□□□ -2.32
SSR1P43307 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms