Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC009237.6-201ENST00000446969 424 ntBASIC3.83□□□□□ -1.8
CLCN1P35523 AC006483.1-201ENST00000487308 313 ntBASIC3.83□□□□□ -1.8
CLCN1P35523 AC091826.1-201ENST00000514065 313 ntBASIC3.83□□□□□ -1.8
CLCN1P35523 RNA5SP281-201ENST00000516504 135 ntBASIC3.83□□□□□ -1.8
CLCN1P35523 SNORD45.4-201ENST00000516629 73 ntBASIC3.83□□□□□ -1.8
CLCN1P35523 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.83□□□□□ -1.8
CLCN1P35523 AC021443.1-201ENST00000604478 211 ntBASIC3.83□□□□□ -1.8
CLCN1P35523 AL161756.2-201ENST00000604597 246 ntBASIC3.83□□□□□ -1.8
CLCN1P35523 AP001318.4-201ENST00000616637 121 ntBASIC3.83□□□□□ -1.8
CLCN1P35523 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLCN1P35523 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLCN1P35523 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLCN1P35523 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLCN1P35523 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLCN1P35523 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLCN1P35523 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.82□□□□□ -1.8
CLCN1P35523 SNORD9-201ENST00000362566 104 ntBASIC3.82□□□□□ -1.8
CLCN1P35523 RNU6-1113P-201ENST00000384348 107 ntBASIC3.82□□□□□ -1.8
CLCN1P35523 U8.17-201ENST00000391292 132 ntBASIC3.82□□□□□ -1.8
CLCN1P35523 RPL23AP67-201ENST00000465341 474 ntBASIC3.82□□□□□ -1.8
CLCN1P35523 SNORD36C-201ENST00000516733 66 ntBASIC3.82□□□□□ -1.8
CLCN1P35523 MIR3616-201ENST00000584070 92 ntBASIC3.82□□□□□ -1.8
CLCN1P35523 AL121772.2-201ENST00000614331 297 ntBASIC3.82□□□□□ -1.8
CLCN1P35523 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLCN1P35523 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLCN1P35523 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.81□□□□□ -1.8
CLCN1P35523 MFSD8-233ENST00000641482 4860 ntBASIC3.81□□□□□ -1.8
CLCN1P35523 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.81□□□□□ -1.8
CLCN1P35523 Y_RNA.265-201ENST00000364677 108 ntBASIC3.81□□□□□ -1.8
CLCN1P35523 RNU1-133P-201ENST00000364867 167 ntBASIC3.81□□□□□ -1.8
CLCN1P35523 Y_RNA.323-201ENST00000365157 109 ntBASIC3.81□□□□□ -1.8
CLCN1P35523 Y_RNA.362-201ENST00000365518 110 ntBASIC3.81□□□□□ -1.8
CLCN1P35523 U8.9-201ENST00000365667 134 ntBASIC3.81□□□□□ -1.8
CLCN1P35523 AL133547.1-201ENST00000448546 220 ntBASIC3.81□□□□□ -1.8
CLCN1P35523 UQCRHP3-201ENST00000451503 251 ntBASIC3.81□□□□□ -1.8
CLCN1P35523 PRSS3P4-201ENST00000453323 162 ntBASIC3.81□□□□□ -1.8
CLCN1P35523 RN7SL601P-201ENST00000471221 293 ntBASIC3.81□□□□□ -1.8
CLCN1P35523 SNORA70.18-201ENST00000516696 98 ntBASIC3.81□□□□□ -1.8
CLCN1P35523 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.81□□□□□ -1.8
CLCN1P35523 IGKV3-31-201ENST00000523109 329 ntBASIC3.81□□□□□ -1.8
CLCN1P35523 AC024614.2-201ENST00000577584 372 ntBASIC3.81□□□□□ -1.8
CLCN1P35523 RNU6-94P-201ENST00000607728 107 ntBASIC3.81□□□□□ -1.8
CLCN1P35523 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLCN1P35523 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CLCN1P35523 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLCN1P35523 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.8□□□□□ -1.8
CLCN1P35523 RNU6-349P-201ENST00000362402 107 ntBASIC3.8□□□□□ -1.8
CLCN1P35523 RNU6-640P-201ENST00000363693 105 ntBASIC3.8□□□□□ -1.8
CLCN1P35523 RNY1P6-201ENST00000384193 109 ntBASIC3.8□□□□□ -1.8
CLCN1P35523 RNA5SP482-201ENST00000391269 118 ntBASIC3.8□□□□□ -1.8
CLCN1P35523 MIR1289-1-201ENST00000408836 144 ntBASIC3.8□□□□□ -1.8
CLCN1P35523 ATP5A1P2-201ENST00000412323 255 ntBASIC3.8□□□□□ -1.8
CLCN1P35523 RPL32P35-201ENST00000415214 394 ntBASIC3.8□□□□□ -1.8
CLCN1P35523 AL035423.1-201ENST00000420331 213 ntBASIC3.8□□□□□ -1.8
CLCN1P35523 AC245047.3-201ENST00000429428 127 ntBASIC3.8□□□□□ -1.8
CLCN1P35523 RN7SL297P-201ENST00000483161 293 ntBASIC3.8□□□□□ -1.8
CLCN1P35523 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.8□□□□□ -1.8
CLCN1P35523 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.8□□□□□ -1.8
CLCN1P35523 AC015726.2-201ENST00000620112 122 ntBASIC3.8□□□□□ -1.8
CLCN1P35523 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.8□□□□□ -1.8
CLCN1P35523 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLCN1P35523 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CLCN1P35523 RNA5SP124-201ENST00000362739 110 ntBASIC3.79□□□□□ -1.8
CLCN1P35523 RNA5SP493-201ENST00000364115 91 ntBASIC3.79□□□□□ -1.8
CLCN1P35523 Y_RNA.336-201ENST00000365307 109 ntBASIC3.79□□□□□ -1.8
CLCN1P35523 SNORA51.10-201ENST00000384418 136 ntBASIC3.79□□□□□ -1.8
CLCN1P35523 SNORA80E-201ENST00000384744 137 ntBASIC3.79□□□□□ -1.8
CLCN1P35523 SNRPGP14-201ENST00000435400 219 ntBASIC3.79□□□□□ -1.8
CLCN1P35523 AC099677.2-201ENST00000436385 175 ntBASIC3.79□□□□□ -1.8
CLCN1P35523 SNORA18.7-201ENST00000516910 131 ntBASIC3.79□□□□□ -1.8
CLCN1P35523 SUMO2P16-201ENST00000519475 264 ntBASIC3.79□□□□□ -1.8
CLCN1P35523 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.79□□□□□ -1.8
CLCN1P35523 MIR6733-201ENST00000635723 61 ntBASIC3.79□□□□□ -1.8
CLCN1P35523 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLCN1P35523 AL355596.1-201ENST00000565399 3996 ntBASIC3.79□□□□□ -1.8
CLCN1P35523 AC017071.1-201ENST00000564407 2204 ntBASIC3.79□□□□□ -1.8
CLCN1P35523 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.79□□□□□ -1.8
CLCN1P35523 Y_RNA.298-201ENST00000364960 107 ntBASIC3.78□□□□□ -1.8
CLCN1P35523 MIR1302-4-201ENST00000408701 150 ntBASIC3.78□□□□□ -1.8
CLCN1P35523 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.78□□□□□ -1.8
CLCN1P35523 AL109933.2-201ENST00000452651 260 ntBASIC3.78□□□□□ -1.8
CLCN1P35523 RNU7-164P-201ENST00000459221 62 ntBASIC3.78□□□□□ -1.8
CLCN1P35523 AL049873.1-201ENST00000480540 376 ntBASIC3.78□□□□□ -1.8
CLCN1P35523 AC012314.7-201ENST00000619693 93 ntBASIC3.78□□□□□ -1.8
CLCN1P35523 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.78□□□□□ -1.8
CLCN1P35523 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.78□□□□□ -1.81
CLCN1P35523 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLCN1P35523 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.77□□□□□ -1.81
CLCN1P35523 RNU6-23P-201ENST00000363283 107 ntBASIC3.77□□□□□ -1.81
CLCN1P35523 Y_RNA.440-201ENST00000384120 114 ntBASIC3.77□□□□□ -1.81
CLCN1P35523 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.77□□□□□ -1.81
CLCN1P35523 RNU6-830P-201ENST00000516353 107 ntBASIC3.77□□□□□ -1.81
CLCN1P35523 RNU1-95P-201ENST00000516357 160 ntBASIC3.77□□□□□ -1.81
CLCN1P35523 SNORA40.13-201ENST00000516379 120 ntBASIC3.77□□□□□ -1.81
CLCN1P35523 RNU1-128P-201ENST00000516704 160 ntBASIC3.77□□□□□ -1.81
CLCN1P35523 AP003484.1-201ENST00000530974 250 ntBASIC3.77□□□□□ -1.81
CLCN1P35523 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CLCN1P35523 U4.6-201ENST00000621618 127 ntBASIC3.77□□□□□ -1.81
CLCN1P35523 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLCN1P35523 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms