Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 SNORA31.4-201ENST00000516049 129 ntBASIC0.93□□□□□ -2.26
RFC4P35249 RNU6-1278P-201ENST00000516130 107 ntBASIC0.93□□□□□ -2.26
RFC4P35249 RNU6-307P-201ENST00000516743 106 ntBASIC0.93□□□□□ -2.26
RFC4P35249 AC023442.1-201ENST00000531247 422 ntBASIC0.93□□□□□ -2.26
RFC4P35249 AC055872.1-201ENST00000570978 278 ntBASIC0.93□□□□□ -2.26
RFC4P35249 MIR3684-201ENST00000579779 74 ntBASIC0.93□□□□□ -2.26
RFC4P35249 GHRLOS.1-201ENST00000610995 70 ntBASIC0.93□□□□□ -2.26
RFC4P35249 AC087588.2-201ENST00000617667 426 ntBASIC0.93□□□□□ -2.26
RFC4P35249 AC098679.4-201ENST00000624241 654 ntBASIC0.93□□□□□ -2.26
RFC4P35249 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
RFC4P35249 Y_RNA.248-201ENST00000364501 109 ntBASIC0.92□□□□□ -2.26
RFC4P35249 Y_RNA.279-201ENST00000364763 95 ntBASIC0.92□□□□□ -2.26
RFC4P35249 RNU6-117P-201ENST00000365415 107 ntBASIC0.92□□□□□ -2.26
RFC4P35249 MIR653-201ENST00000385279 96 ntBASIC0.92□□□□□ -2.26
RFC4P35249 RNU6-910P-201ENST00000390844 107 ntBASIC0.92□□□□□ -2.26
RFC4P35249 RNU6-1156P-201ENST00000410365 100 ntBASIC0.92□□□□□ -2.26
RFC4P35249 Y_RNA.619-201ENST00000410951 90 ntBASIC0.92□□□□□ -2.26
RFC4P35249 Y_RNA.646-201ENST00000410980 101 ntBASIC0.92□□□□□ -2.26
RFC4P35249 AC104332.1-201ENST00000440471 797 ntBASIC0.92□□□□□ -2.26
RFC4P35249 AL049830.1-201ENST00000468034 425 ntBASIC0.92□□□□□ -2.26
RFC4P35249 AC022493.2-201ENST00000506122 481 ntBASIC0.92□□□□□ -2.26
RFC4P35249 AP002004.2-201ENST00000531656 154 ntBASIC0.92□□□□□ -2.26
RFC4P35249 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.92□□□□□ -2.26
RFC4P35249 MIR4653-201ENST00000585107 83 ntBASIC0.92□□□□□ -2.26
RFC4P35249 AL117336.2-201ENST00000602435 335 ntBASIC0.92□□□□□ -2.26
RFC4P35249 AC004467.1-201ENST00000615678 330 ntBASIC0.92□□□□□ -2.26
RFC4P35249 TPTEP1-208ENST00000636884 213 ntBASIC0.92□□□□□ -2.26
RFC4P35249 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
RFC4P35249 MIRLET7C-201ENST00000362160 84 ntBASIC0.91□□□□□ -2.26
RFC4P35249 Y_RNA.115-201ENST00000363272 98 ntBASIC0.91□□□□□ -2.26
RFC4P35249 Y_RNA.243-201ENST00000364481 109 ntBASIC0.91□□□□□ -2.26
RFC4P35249 SNORD81.2-201ENST00000365153 76 ntBASIC0.91□□□□□ -2.26
RFC4P35249 RNU6-310P-201ENST00000384655 107 ntBASIC0.91□□□□□ -2.26
RFC4P35249 SNORA69.1-201ENST00000390904 137 ntBASIC0.91□□□□□ -2.26
RFC4P35249 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.91□□□□□ -2.26
RFC4P35249 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.91□□□□□ -2.26
RFC4P35249 RNA5SP193-201ENST00000410353 107 ntBASIC0.91□□□□□ -2.26
RFC4P35249 RNA5SP511-201ENST00000410487 115 ntBASIC0.91□□□□□ -2.26
RFC4P35249 RNU5A-5P-201ENST00000411054 116 ntBASIC0.91□□□□□ -2.26
RFC4P35249 RNU2-64P-201ENST00000411315 191 ntBASIC0.91□□□□□ -2.26
RFC4P35249 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.91□□□□□ -2.26
RFC4P35249 RPEP5-201ENST00000441137 268 ntBASIC0.91□□□□□ -2.26
RFC4P35249 Y_RNA.635-201ENST00000459041 101 ntBASIC0.91□□□□□ -2.26
RFC4P35249 RNU7-169P-201ENST00000459456 61 ntBASIC0.91□□□□□ -2.26
RFC4P35249 RNU7-28P-201ENST00000516759 62 ntBASIC0.91□□□□□ -2.26
RFC4P35249 RNU6-1096P-201ENST00000517089 102 ntBASIC0.91□□□□□ -2.26
RFC4P35249 AC004812.1-201ENST00000540773 146 ntBASIC0.91□□□□□ -2.26
RFC4P35249 AC090049.2-201ENST00000550377 109 ntBASIC0.91□□□□□ -2.26
RFC4P35249 AC005828.6-201ENST00000606610 232 ntBASIC0.91□□□□□ -2.26
RFC4P35249 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.91□□□□□ -2.26
RFC4P35249 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.91□□□□□ -2.26
RFC4P35249 U6atac.1-201ENST00000616025 117 ntBASIC0.91□□□□□ -2.26
RFC4P35249 MIR924-201ENST00000638017 53 ntBASIC0.91□□□□□ -2.26
RFC4P35249 RNU6-1310P-201ENST00000384153 107 ntBASIC0.9□□□□□ -2.27
RFC4P35249 RNA5SP482-201ENST00000391269 118 ntBASIC0.9□□□□□ -2.27
RFC4P35249 AL451046.2-201ENST00000403074 277 ntBASIC0.9□□□□□ -2.27
RFC4P35249 Y_RNA.592-201ENST00000410274 109 ntBASIC0.9□□□□□ -2.27
RFC4P35249 MTND4P28-201ENST00000426217 387 ntBASIC0.9□□□□□ -2.27
RFC4P35249 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.9□□□□□ -2.27
RFC4P35249 RPL30P15-201ENST00000457129 321 ntBASIC0.9□□□□□ -2.27
RFC4P35249 Y_RNA.691-201ENST00000516611 103 ntBASIC0.9□□□□□ -2.27
RFC4P35249 RNU6-264P-201ENST00000517134 104 ntBASIC0.9□□□□□ -2.27
RFC4P35249 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.9□□□□□ -2.27
RFC4P35249 AC092794.1-201ENST00000612734 582 ntBASIC0.9□□□□□ -2.27
RFC4P35249 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
RFC4P35249 HSBP1P2-201ENST00000299671 229 ntBASIC0.89□□□□□ -2.27
RFC4P35249 RNU6-1188P-201ENST00000363795 107 ntBASIC0.89□□□□□ -2.27
RFC4P35249 SNORA2.2-201ENST00000365473 135 ntBASIC0.89□□□□□ -2.27
RFC4P35249 Y_RNA.363-201ENST00000365529 113 ntBASIC0.89□□□□□ -2.27
RFC4P35249 MIR19B1-201ENST00000384829 87 ntBASIC0.89□□□□□ -2.27
RFC4P35249 MIR562-201ENST00000384894 95 ntBASIC0.89□□□□□ -2.27
RFC4P35249 Y_RNA.599-201ENST00000410489 109 ntBASIC0.89□□□□□ -2.27
RFC4P35249 MTND1P2-201ENST00000430604 821 ntBASIC0.89□□□□□ -2.27
RFC4P35249 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.89□□□□□ -2.27
RFC4P35249 MIR4711-201ENST00000578274 70 ntBASIC0.89□□□□□ -2.27
RFC4P35249 AL512605.2-201ENST00000592972 256 ntBASIC0.89□□□□□ -2.27
RFC4P35249 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
RFC4P35249 RNA5SP347-201ENST00000362445 119 ntBASIC0.88□□□□□ -2.27
RFC4P35249 RNU4-79P-201ENST00000362764 141 ntBASIC0.88□□□□□ -2.27
RFC4P35249 Y_RNA.101-201ENST00000363154 102 ntBASIC0.88□□□□□ -2.27
RFC4P35249 SNORD115-30-201ENST00000364117 82 ntBASIC0.88□□□□□ -2.27
RFC4P35249 SNORD114-24-201ENST00000365029 72 ntBASIC0.88□□□□□ -2.27
RFC4P35249 RNU6-890P-201ENST00000384121 107 ntBASIC0.88□□□□□ -2.27
RFC4P35249 Y_RNA.577-201ENST00000384794 101 ntBASIC0.88□□□□□ -2.27
RFC4P35249 MIR520G-201ENST00000385064 90 ntBASIC0.88□□□□□ -2.27
RFC4P35249 SNORA75.6-201ENST00000391318 127 ntBASIC0.88□□□□□ -2.27
RFC4P35249 Y_RNA.621-201ENST00000411065 96 ntBASIC0.88□□□□□ -2.27
RFC4P35249 RNU6-1054P-201ENST00000411293 104 ntBASIC0.88□□□□□ -2.27
RFC4P35249 AL354751.2-201ENST00000415471 210 ntBASIC0.88□□□□□ -2.27
RFC4P35249 MRPS18CP6-201ENST00000423587 223 ntBASIC0.88□□□□□ -2.27
RFC4P35249 PIGPP3-201ENST00000425307 415 ntBASIC0.88□□□□□ -2.27
RFC4P35249 AC245047.7-201ENST00000440265 293 ntBASIC0.88□□□□□ -2.27
RFC4P35249 MTCO3P10-201ENST00000455912 772 ntBASIC0.88□□□□□ -2.27
RFC4P35249 ELOCP24-201ENST00000456370 334 ntBASIC0.88□□□□□ -2.27
RFC4P35249 AC117454.1-201ENST00000491120 168 ntBASIC0.88□□□□□ -2.27
RFC4P35249 RNU6-322P-201ENST00000516010 103 ntBASIC0.88□□□□□ -2.27
RFC4P35249 ACA64.5-201ENST00000516207 127 ntBASIC0.88□□□□□ -2.27
RFC4P35249 RNU6-1337P-201ENST00000516525 95 ntBASIC0.88□□□□□ -2.27
RFC4P35249 RNA5SP330-201ENST00000517096 96 ntBASIC0.88□□□□□ -2.27
RFC4P35249 RNU2-12P-201ENST00000517216 168 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms