Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 MCFD2P1-201ENST00000417812 300 ntBASIC-0.79□□□□□ -2.54
CKS2P33552 AC133104.1-201ENST00000429100 218 ntBASIC-0.79□□□□□ -2.54
CKS2P33552 MIR3682-201ENST00000581338 84 ntBASIC-0.79□□□□□ -2.54
CKS2P33552 AC121247.2-201ENST00000604776 136 ntBASIC-0.79□□□□□ -2.54
CKS2P33552 AL442067.1-201ENST00000613261 223 ntBASIC-0.79□□□□□ -2.54
CKS2P33552 MIR7844-201ENST00000616161 122 ntBASIC-0.79□□□□□ -2.54
CKS2P33552 Pinc.1-201ENST00000616452 154 ntBASIC-0.79□□□□□ -2.54
CKS2P33552 AC072046.2-201ENST00000618366 268 ntBASIC-0.79□□□□□ -2.54
CKS2P33552 uc_338.36-201ENST00000622331 158 ntBASIC-0.79□□□□□ -2.54
CKS2P33552 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.79□□□□□ -2.54
CKS2P33552 AC007671.2-201ENST00000637344 619 ntBASIC-0.79□□□□□ -2.54
CKS2P33552 MIR4788-201ENST00000639104 80 ntBASIC-0.79□□□□□ -2.54
CKS2P33552 SNORD114-7-201ENST00000362520 77 ntBASIC-0.8□□□□□ -2.54
CKS2P33552 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.8□□□□□ -2.54
CKS2P33552 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.8□□□□□ -2.54
CKS2P33552 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.8□□□□□ -2.54
CKS2P33552 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.8□□□□□ -2.54
CKS2P33552 RNU7-181P-201ENST00000517234 74 ntBASIC-0.8□□□□□ -2.54
CKS2P33552 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.8□□□□□ -2.54
CKS2P33552 AL157392.4-201ENST00000609756 345 ntBASIC-0.8□□□□□ -2.54
CKS2P33552 AP000240.1-201ENST00000609910 452 ntBASIC-0.8□□□□□ -2.54
CKS2P33552 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.8□□□□□ -2.54
CKS2P33552 MIR8066-201ENST00000617280 78 ntBASIC-0.8□□□□□ -2.54
CKS2P33552 AC022306.2-201ENST00000617563 647 ntBASIC-0.8□□□□□ -2.54
CKS2P33552 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.8□□□□□ -2.54
CKS2P33552 MIR6514-201ENST00000622549 70 ntBASIC-0.8□□□□□ -2.54
CKS2P33552 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.81□□□□□ -2.54
CKS2P33552 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.81□□□□□ -2.54
CKS2P33552 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.81□□□□□ -2.54
CKS2P33552 RNU6-282P-201ENST00000365357 103 ntBASIC-0.81□□□□□ -2.54
CKS2P33552 RNU6-517P-201ENST00000384362 110 ntBASIC-0.81□□□□□ -2.54
CKS2P33552 RNU6-933P-201ENST00000384424 107 ntBASIC-0.81□□□□□ -2.54
CKS2P33552 RNU6-456P-201ENST00000384493 107 ntBASIC-0.81□□□□□ -2.54
CKS2P33552 MTCO2P16-201ENST00000436962 677 ntBASIC-0.81□□□□□ -2.54
CKS2P33552 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.81□□□□□ -2.54
CKS2P33552 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.81□□□□□ -2.54
CKS2P33552 AC026782.1-201ENST00000512952 449 ntBASIC-0.81□□□□□ -2.54
CKS2P33552 IGLVI-20-201ENST00000519296 130 ntBASIC-0.81□□□□□ -2.54
CKS2P33552 AP002963.1-201ENST00000530590 184 ntBASIC-0.81□□□□□ -2.54
CKS2P33552 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.81□□□□□ -2.54
CKS2P33552 AL133215.3-201ENST00000609801 448 ntBASIC-0.81□□□□□ -2.54
CKS2P33552 TUSC7.1-201ENST00000610969 165 ntBASIC-0.81□□□□□ -2.54
CKS2P33552 MIR8064-201ENST00000612863 90 ntBASIC-0.81□□□□□ -2.54
CKS2P33552 MIR548AZ-201ENST00000616567 95 ntBASIC-0.81□□□□□ -2.54
CKS2P33552 SNORD114-31-201ENST00000363219 75 ntBASIC-0.82□□□□□ -2.54
CKS2P33552 SNORD28-201ENST00000384706 75 ntBASIC-0.82□□□□□ -2.54
CKS2P33552 SNORA32.3-201ENST00000384772 121 ntBASIC-0.82□□□□□ -2.54
CKS2P33552 MIR518F-201ENST00000384973 87 ntBASIC-0.82□□□□□ -2.54
CKS2P33552 RNU2-9P-201ENST00000410194 145 ntBASIC-0.82□□□□□ -2.54
CKS2P33552 RNU6-855P-201ENST00000410395 104 ntBASIC-0.82□□□□□ -2.54
CKS2P33552 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.82□□□□□ -2.54
CKS2P33552 SNRPGP14-201ENST00000435400 219 ntBASIC-0.82□□□□□ -2.54
CKS2P33552 Y_RNA.676-201ENST00000516393 96 ntBASIC-0.82□□□□□ -2.54
CKS2P33552 RNU6-135P-201ENST00000516769 101 ntBASIC-0.82□□□□□ -2.54
CKS2P33552 MIR3925-201ENST00000584674 77 ntBASIC-0.82□□□□□ -2.54
CKS2P33552 AC103705.1-201ENST00000619013 241 ntBASIC-0.82□□□□□ -2.54
CKS2P33552 SNORD14E-201ENST00000364009 85 ntBASIC-0.83□□□□□ -2.54
CKS2P33552 RNA5SP127-201ENST00000411051 133 ntBASIC-0.83□□□□□ -2.54
CKS2P33552 RNU6-847P-201ENST00000411115 108 ntBASIC-0.83□□□□□ -2.54
CKS2P33552 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.83□□□□□ -2.54
CKS2P33552 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.83□□□□□ -2.54
CKS2P33552 AL356010.1-201ENST00000456364 102 ntBASIC-0.83□□□□□ -2.54
CKS2P33552 RNU6-189P-201ENST00000516120 101 ntBASIC-0.83□□□□□ -2.54
CKS2P33552 SNORA31.14-201ENST00000516728 116 ntBASIC-0.83□□□□□ -2.54
CKS2P33552 MTND4P7-201ENST00000523876 130 ntBASIC-0.83□□□□□ -2.54
CKS2P33552 CR383656.4-201ENST00000546909 122 ntBASIC-0.83□□□□□ -2.54
CKS2P33552 MIR5692C1-201ENST00000585309 91 ntBASIC-0.83□□□□□ -2.54
CKS2P33552 AL357078.3-201ENST00000607528 618 ntBASIC-0.83□□□□□ -2.54
CKS2P33552 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.83□□□□□ -2.54
CKS2P33552 AC009161.2-201ENST00000624626 138 ntBASIC-0.83□□□□□ -2.54
CKS2P33552 AL162726.3-218ENST00000636401 95 ntBASIC-0.83□□□□□ -2.54
CKS2P33552 MIR410-201ENST00000362222 80 ntBASIC-0.84□□□□□ -2.54
CKS2P33552 RNU6-454P-201ENST00000364292 107 ntBASIC-0.84□□□□□ -2.54
CKS2P33552 RNU6-906P-201ENST00000384700 70 ntBASIC-0.84□□□□□ -2.54
CKS2P33552 RNY3P9-201ENST00000384727 106 ntBASIC-0.84□□□□□ -2.54
CKS2P33552 MIR588-201ENST00000384900 83 ntBASIC-0.84□□□□□ -2.54
CKS2P33552 TRBVB-201ENST00000477100 408 ntBASIC-0.84□□□□□ -2.54
CKS2P33552 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-0.84□□□□□ -2.54
CKS2P33552 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.84□□□□□ -2.54
CKS2P33552 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.84□□□□□ -2.54
CKS2P33552 AP003168.1-201ENST00000530091 307 ntBASIC-0.84□□□□□ -2.54
CKS2P33552 MIR4424-201ENST00000585257 86 ntBASIC-0.84□□□□□ -2.54
CKS2P33552 MIR148A-201ENST00000362215 68 ntBASIC-0.85□□□□□ -2.55
CKS2P33552 RNU6-324P-201ENST00000363957 106 ntBASIC-0.85□□□□□ -2.55
CKS2P33552 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.85□□□□□ -2.55
CKS2P33552 RNU6-281P-201ENST00000384212 103 ntBASIC-0.85□□□□□ -2.55
CKS2P33552 MIR215-201ENST00000384858 110 ntBASIC-0.85□□□□□ -2.55
CKS2P33552 MIR329-2-201ENST00000385029 84 ntBASIC-0.85□□□□□ -2.55
CKS2P33552 MTCYBP8-201ENST00000422855 651 ntBASIC-0.85□□□□□ -2.55
CKS2P33552 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.85□□□□□ -2.55
CKS2P33552 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.85□□□□□ -2.55
CKS2P33552 MTCO3P38-201ENST00000468910 766 ntBASIC-0.85□□□□□ -2.55
CKS2P33552 AC022616.4-201ENST00000522985 181 ntBASIC-0.85□□□□□ -2.55
CKS2P33552 AC134698.4-201ENST00000523451 826 ntBASIC-0.85□□□□□ -2.55
CKS2P33552 AC006600.1-201ENST00000572529 153 ntBASIC-0.85□□□□□ -2.55
CKS2P33552 MIR548AB-201ENST00000584917 84 ntBASIC-0.85□□□□□ -2.55
CKS2P33552 MIR4639-201ENST00000584938 69 ntBASIC-0.85□□□□□ -2.55
CKS2P33552 AL022161.1-201ENST00000604390 213 ntBASIC-0.85□□□□□ -2.55
CKS2P33552 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.86□□□□□ -2.55
CKS2P33552 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.86□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms