Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 PIGPP3-201ENST00000425307 415 ntBASIC1.13□□□□□ -2.23
BDNFP23560 AC099799.1-201ENST00000439809 192 ntBASIC1.13□□□□□ -2.23
BDNFP23560 CHEK2P4-201ENST00000450340 246 ntBASIC1.13□□□□□ -2.23
BDNFP23560 RNU7-21P-201ENST00000459430 62 ntBASIC1.13□□□□□ -2.23
BDNFP23560 AC114811.1-201ENST00000507207 168 ntBASIC1.13□□□□□ -2.23
BDNFP23560 RN7SKP179-201ENST00000516126 217 ntBASIC1.13□□□□□ -2.23
BDNFP23560 AC090142.3-201ENST00000519012 385 ntBASIC1.13□□□□□ -2.23
BDNFP23560 PRELID3BP2-201ENST00000605362 201 ntBASIC1.13□□□□□ -2.23
BDNFP23560 AL391903.3-201ENST00000612158 163 ntBASIC1.13□□□□□ -2.23
BDNFP23560 AC092794.1-201ENST00000612734 582 ntBASIC1.13□□□□□ -2.23
BDNFP23560 AC240442.1-201ENST00000616055 283 ntBASIC1.13□□□□□ -2.23
BDNFP23560 AC087588.2-201ENST00000617667 426 ntBASIC1.13□□□□□ -2.23
BDNFP23560 RNU6-1188P-201ENST00000363795 107 ntBASIC1.12□□□□□ -2.23
BDNFP23560 RNU6-1080P-201ENST00000383982 107 ntBASIC1.12□□□□□ -2.23
BDNFP23560 RNU6-926P-201ENST00000384075 107 ntBASIC1.12□□□□□ -2.23
BDNFP23560 MIR526A1-201ENST00000384897 85 ntBASIC1.12□□□□□ -2.23
BDNFP23560 MIR1287-201ENST00000408492 90 ntBASIC1.12□□□□□ -2.23
BDNFP23560 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
BDNFP23560 RPS20P10-201ENST00000451209 253 ntBASIC1.12□□□□□ -2.23
BDNFP23560 Y_RNA.653-201ENST00000459091 95 ntBASIC1.12□□□□□ -2.23
BDNFP23560 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.12□□□□□ -2.23
BDNFP23560 AC211469.2-201ENST00000605461 205 ntBASIC1.12□□□□□ -2.23
BDNFP23560 SNORD114-21-201ENST00000606412 72 ntBASIC1.12□□□□□ -2.23
BDNFP23560 MIR6504-201ENST00000613520 61 ntBASIC1.12□□□□□ -2.23
BDNFP23560 RNU6-1084P-201ENST00000362498 107 ntBASIC1.11□□□□□ -2.23
BDNFP23560 SNORD124-201ENST00000459577 104 ntBASIC1.11□□□□□ -2.23
BDNFP23560 Y_RNA.673-201ENST00000516306 88 ntBASIC1.11□□□□□ -2.23
BDNFP23560 RNU6-1116P-201ENST00000517269 99 ntBASIC1.11□□□□□ -2.23
BDNFP23560 MTND4LP26-201ENST00000518144 282 ntBASIC1.11□□□□□ -2.23
BDNFP23560 AL591926.4-201ENST00000616895 298 ntBASIC1.11□□□□□ -2.23
BDNFP23560 AC007742.2-201ENST00000618226 398 ntBASIC1.11□□□□□ -2.23
BDNFP23560 RNU6-961P-201ENST00000363893 105 ntBASIC1.1□□□□□ -2.23
BDNFP23560 Y_RNA.363-201ENST00000365529 113 ntBASIC1.1□□□□□ -2.23
BDNFP23560 RNU6-310P-201ENST00000384655 107 ntBASIC1.1□□□□□ -2.23
BDNFP23560 Y_RNA.646-201ENST00000410980 101 ntBASIC1.1□□□□□ -2.23
BDNFP23560 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.1□□□□□ -2.23
BDNFP23560 RNU6-470P-201ENST00000515954 104 ntBASIC1.1□□□□□ -2.23
BDNFP23560 RNU6-155P-201ENST00000516347 100 ntBASIC1.1□□□□□ -2.23
BDNFP23560 RNU6-1213P-201ENST00000517075 94 ntBASIC1.1□□□□□ -2.23
BDNFP23560 AC005972.2-201ENST00000604690 348 ntBASIC1.1□□□□□ -2.23
BDNFP23560 AL020996.3-201ENST00000606617 222 ntBASIC1.1□□□□□ -2.23
BDNFP23560 AL096861.1-201ENST00000610899 123 ntBASIC1.1□□□□□ -2.23
BDNFP23560 snoU2-30.1-201ENST00000365012 70 ntBASIC1.09□□□□□ -2.23
BDNFP23560 SNORD114-22-201ENST00000365423 72 ntBASIC1.09□□□□□ -2.23
BDNFP23560 MT-TL1-201ENST00000386347 75 ntBASIC1.09□□□□□ -2.23
BDNFP23560 MIR1298-201ENST00000408783 112 ntBASIC1.09□□□□□ -2.23
BDNFP23560 RNU2-61P-201ENST00000411069 191 ntBASIC1.09□□□□□ -2.23
BDNFP23560 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.09□□□□□ -2.23
BDNFP23560 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.09□□□□□ -2.23
BDNFP23560 AC136443.5-201ENST00000603741 370 ntBASIC1.09□□□□□ -2.23
BDNFP23560 AC113139.1-201ENST00000605049 239 ntBASIC1.09□□□□□ -2.23
BDNFP23560 AC022306.2-201ENST00000617563 647 ntBASIC1.09□□□□□ -2.23
BDNFP23560 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.09□□□□□ -2.24
BDNFP23560 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
BDNFP23560 SNORD14.1-201ENST00000365609 90 ntBASIC1.08□□□□□ -2.24
BDNFP23560 RPS3AP1-201ENST00000413190 320 ntBASIC1.08□□□□□ -2.24
BDNFP23560 AL390729.2-201ENST00000416137 156 ntBASIC1.08□□□□□ -2.24
BDNFP23560 AC024067.1-201ENST00000426199 223 ntBASIC1.08□□□□□ -2.24
BDNFP23560 MTND1P2-201ENST00000430604 821 ntBASIC1.08□□□□□ -2.24
BDNFP23560 RPEP5-201ENST00000441137 268 ntBASIC1.08□□□□□ -2.24
BDNFP23560 RPL39P28-201ENST00000465655 155 ntBASIC1.08□□□□□ -2.24
BDNFP23560 U2.1-201ENST00000618978 145 ntBASIC1.08□□□□□ -2.24
BDNFP23560 MIR6767-201ENST00000637302 66 ntBASIC1.08□□□□□ -2.24
BDNFP23560 RNU6-626P-201ENST00000363354 107 ntBASIC1.07□□□□□ -2.24
BDNFP23560 RNA5SP48-201ENST00000363969 126 ntBASIC1.07□□□□□ -2.24
BDNFP23560 Y_RNA.191-201ENST00000363972 113 ntBASIC1.07□□□□□ -2.24
BDNFP23560 Y_RNA.314-201ENST00000365114 102 ntBASIC1.07□□□□□ -2.24
BDNFP23560 AC117470.1-201ENST00000381974 330 ntBASIC1.07□□□□□ -2.24
BDNFP23560 RNU6-969P-201ENST00000383900 105 ntBASIC1.07□□□□□ -2.24
BDNFP23560 RNU6-20P-201ENST00000384106 107 ntBASIC1.07□□□□□ -2.24
BDNFP23560 SNORA72-201ENST00000384339 132 ntBASIC1.07□□□□□ -2.24
BDNFP23560 MIR520C-201ENST00000385005 87 ntBASIC1.07□□□□□ -2.24
BDNFP23560 RNU6-131P-201ENST00000391144 107 ntBASIC1.07□□□□□ -2.24
BDNFP23560 RNU7-43P-201ENST00000516554 64 ntBASIC1.07□□□□□ -2.24
BDNFP23560 SNORA74.3-201ENST00000517108 154 ntBASIC1.07□□□□□ -2.24
BDNFP23560 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.07□□□□□ -2.24
BDNFP23560 RNU6-490P-201ENST00000362985 107 ntBASIC1.06□□□□□ -2.24
BDNFP23560 RNA5SP264-201ENST00000363115 107 ntBASIC1.06□□□□□ -2.24
BDNFP23560 RNU4-38P-201ENST00000364472 129 ntBASIC1.06□□□□□ -2.24
BDNFP23560 RNU1-93P-201ENST00000364704 169 ntBASIC1.06□□□□□ -2.24
BDNFP23560 RNU6-890P-201ENST00000384121 107 ntBASIC1.06□□□□□ -2.24
BDNFP23560 MTND4P17-201ENST00000470444 350 ntBASIC1.06□□□□□ -2.24
BDNFP23560 RNU6-1012P-201ENST00000516606 109 ntBASIC1.06□□□□□ -2.24
BDNFP23560 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
BDNFP23560 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.06□□□□□ -2.24
BDNFP23560 AL008636.1-201ENST00000625038 1018 ntBASIC1.06□□□□□ -2.24
BDNFP23560 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
BDNFP23560 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
BDNFP23560 MIR103A2-201ENST00000362154 78 ntBASIC1.05□□□□□ -2.24
BDNFP23560 Y_RNA.27-201ENST00000362540 103 ntBASIC1.05□□□□□ -2.24
BDNFP23560 Y_RNA.248-201ENST00000364501 109 ntBASIC1.05□□□□□ -2.24
BDNFP23560 Y_RNA.253-201ENST00000364562 112 ntBASIC1.05□□□□□ -2.24
BDNFP23560 SNORD81.2-201ENST00000365153 76 ntBASIC1.05□□□□□ -2.24
BDNFP23560 Y_RNA.446-201ENST00000384178 104 ntBASIC1.05□□□□□ -2.24
BDNFP23560 RNU6-1297P-201ENST00000384415 104 ntBASIC1.05□□□□□ -2.24
BDNFP23560 MIR608-201ENST00000384820 100 ntBASIC1.05□□□□□ -2.24
BDNFP23560 RNU4-14P-201ENST00000410858 122 ntBASIC1.05□□□□□ -2.24
BDNFP23560 MLLT10P1-201ENST00000418346 262 ntBASIC1.05□□□□□ -2.24
BDNFP23560 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.05□□□□□ -2.24
BDNFP23560 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms