Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 RNU6-1148P-201ENST00000410992 104 ntBASIC0.5□□□□□ -2.33
USF1P22415 AL162725.1-201ENST00000435405 301 ntBASIC0.5□□□□□ -2.33
USF1P22415 AC098869.1-201ENST00000481627 292 ntBASIC0.5□□□□□ -2.33
USF1P22415 SNORA40.9-201ENST00000515895 93 ntBASIC0.5□□□□□ -2.33
USF1P22415 SNORA74.3-201ENST00000517108 154 ntBASIC0.5□□□□□ -2.33
USF1P22415 AC109810.1-201ENST00000534066 224 ntBASIC0.5□□□□□ -2.33
USF1P22415 MIR4762-201ENST00000585261 75 ntBASIC0.5□□□□□ -2.33
USF1P22415 AL512605.2-201ENST00000592972 256 ntBASIC0.5□□□□□ -2.33
USF1P22415 RNU6-874P-201ENST00000362390 105 ntBASIC0.49□□□□□ -2.33
USF1P22415 RNY1P16-201ENST00000363063 111 ntBASIC0.49□□□□□ -2.33
USF1P22415 Y_RNA.573-201ENST00000384763 105 ntBASIC0.49□□□□□ -2.33
USF1P22415 MIR520C-201ENST00000385005 87 ntBASIC0.49□□□□□ -2.33
USF1P22415 MIR92A1-201ENST00000385233 78 ntBASIC0.49□□□□□ -2.33
USF1P22415 RNA5SP511-201ENST00000410487 115 ntBASIC0.49□□□□□ -2.33
USF1P22415 AC074085.1-201ENST00000413598 418 ntBASIC0.49□□□□□ -2.33
USF1P22415 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.49□□□□□ -2.33
USF1P22415 RPL23AP50-201ENST00000434149 455 ntBASIC0.49□□□□□ -2.33
USF1P22415 AC092628.1-201ENST00000436250 252 ntBASIC0.49□□□□□ -2.33
USF1P22415 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.49□□□□□ -2.33
USF1P22415 RNU6-496P-201ENST00000516145 99 ntBASIC0.49□□□□□ -2.33
USF1P22415 AC023442.1-201ENST00000531247 422 ntBASIC0.49□□□□□ -2.33
USF1P22415 AC023827.1-201ENST00000569247 97 ntBASIC0.49□□□□□ -2.33
USF1P22415 AL591926.4-201ENST00000616895 298 ntBASIC0.49□□□□□ -2.33
USF1P22415 Y_RNA.89-201ENST00000363031 102 ntBASIC0.48□□□□□ -2.33
USF1P22415 RNU6-1335P-201ENST00000365426 107 ntBASIC0.48□□□□□ -2.33
USF1P22415 Y_RNA.361-201ENST00000365515 120 ntBASIC0.48□□□□□ -2.33
USF1P22415 MIR15B-201ENST00000385045 98 ntBASIC0.48□□□□□ -2.33
USF1P22415 MIR625-201ENST00000385047 85 ntBASIC0.48□□□□□ -2.33
USF1P22415 MIR136-201ENST00000385207 82 ntBASIC0.48□□□□□ -2.33
USF1P22415 SNORD89-201ENST00000390981 114 ntBASIC0.48□□□□□ -2.33
USF1P22415 MIR1185-1-201ENST00000408598 86 ntBASIC0.48□□□□□ -2.33
USF1P22415 RNA5SP193-201ENST00000410353 107 ntBASIC0.48□□□□□ -2.33
USF1P22415 Y_RNA.621-201ENST00000411065 96 ntBASIC0.48□□□□□ -2.33
USF1P22415 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.48□□□□□ -2.33
USF1P22415 U8.22-201ENST00000459141 133 ntBASIC0.48□□□□□ -2.33
USF1P22415 MTND5P5-201ENST00000503764 376 ntBASIC0.48□□□□□ -2.33
USF1P22415 AC026782.1-201ENST00000512952 449 ntBASIC0.48□□□□□ -2.33
USF1P22415 RNU6-1110P-201ENST00000516462 101 ntBASIC0.48□□□□□ -2.33
USF1P22415 RNU6-1016P-201ENST00000516689 94 ntBASIC0.48□□□□□ -2.33
USF1P22415 MTND4LP26-201ENST00000518144 282 ntBASIC0.48□□□□□ -2.33
USF1P22415 MIR924-201ENST00000638017 53 ntBASIC0.48□□□□□ -2.33
USF1P22415 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.48□□□□□ -2.33
USF1P22415 Y_RNA.2-201ENST00000362330 96 ntBASIC0.47□□□□□ -2.33
USF1P22415 SNORA25.3-201ENST00000363205 127 ntBASIC0.47□□□□□ -2.33
USF1P22415 RNU6-593P-201ENST00000364716 112 ntBASIC0.47□□□□□ -2.33
USF1P22415 Y_RNA.358-201ENST00000365491 99 ntBASIC0.47□□□□□ -2.33
USF1P22415 SNORD14.1-201ENST00000365609 90 ntBASIC0.47□□□□□ -2.33
USF1P22415 AC117470.1-201ENST00000381974 330 ntBASIC0.47□□□□□ -2.33
USF1P22415 RNU6-318P-201ENST00000384283 103 ntBASIC0.47□□□□□ -2.33
USF1P22415 SNORD99-201ENST00000408612 74 ntBASIC0.47□□□□□ -2.33
USF1P22415 MTND2P22-201ENST00000444325 1033 ntBASIC0.47□□□□□ -2.33
USF1P22415 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.47□□□□□ -2.33
USF1P22415 RNU4-54P-201ENST00000516428 129 ntBASIC0.47□□□□□ -2.33
USF1P22415 RNA5SP121-201ENST00000516537 101 ntBASIC0.47□□□□□ -2.33
USF1P22415 RNU6-229P-201ENST00000516614 102 ntBASIC0.47□□□□□ -2.33
USF1P22415 AL136317.1-201ENST00000612653 226 ntBASIC0.47□□□□□ -2.33
USF1P22415 AC015540.1-201ENST00000615828 501 ntBASIC0.47□□□□□ -2.33
USF1P22415 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.47□□□□□ -2.33
USF1P22415 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
USF1P22415 RNA5SP48-201ENST00000363969 126 ntBASIC0.46□□□□□ -2.34
USF1P22415 Y_RNA.450-201ENST00000384198 113 ntBASIC0.46□□□□□ -2.34
USF1P22415 MIR516B2-201ENST00000385190 85 ntBASIC0.46□□□□□ -2.34
USF1P22415 Y_RNA.594-201ENST00000410373 140 ntBASIC0.46□□□□□ -2.34
USF1P22415 AC098934.3-201ENST00000430450 190 ntBASIC0.46□□□□□ -2.34
USF1P22415 AC067940.1-201ENST00000458411 300 ntBASIC0.46□□□□□ -2.34
USF1P22415 AC092989.1-201ENST00000481235 277 ntBASIC0.46□□□□□ -2.34
USF1P22415 RNU7-41P-201ENST00000515917 61 ntBASIC0.46□□□□□ -2.34
USF1P22415 Y_RNA.682-201ENST00000516457 100 ntBASIC0.46□□□□□ -2.34
USF1P22415 RNU6-1337P-201ENST00000516525 95 ntBASIC0.46□□□□□ -2.34
USF1P22415 RNU7-43P-201ENST00000516554 64 ntBASIC0.46□□□□□ -2.34
USF1P22415 RNU11-2P-201ENST00000516898 142 ntBASIC0.46□□□□□ -2.34
USF1P22415 MIR4764-201ENST00000580680 88 ntBASIC0.46□□□□□ -2.34
USF1P22415 AC048344.4-201ENST00000619744 527 ntBASIC0.46□□□□□ -2.34
USF1P22415 7SK.10-201ENST00000621414 298 ntBASIC0.46□□□□□ -2.34
USF1P22415 AC068700.1-201ENST00000565862 3754 ntBASIC0.46□□□□□ -2.34
USF1P22415 SNORD115-30-201ENST00000364117 82 ntBASIC0.45□□□□□ -2.34
USF1P22415 Y_RNA.295-201ENST00000364918 102 ntBASIC0.45□□□□□ -2.34
USF1P22415 RNU6-1297P-201ENST00000384415 104 ntBASIC0.45□□□□□ -2.34
USF1P22415 RNU6-1050P-201ENST00000410388 107 ntBASIC0.45□□□□□ -2.34
USF1P22415 SNORD12B-201ENST00000410433 91 ntBASIC0.45□□□□□ -2.34
USF1P22415 AL353997.1-201ENST00000432936 108 ntBASIC0.45□□□□□ -2.34
USF1P22415 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.45□□□□□ -2.34
USF1P22415 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.45□□□□□ -2.34
USF1P22415 RNU4-49P-201ENST00000516080 140 ntBASIC0.45□□□□□ -2.34
USF1P22415 RN7SKP164-201ENST00000516138 266 ntBASIC0.45□□□□□ -2.34
USF1P22415 MIR2355-201ENST00000517199 87 ntBASIC0.45□□□□□ -2.34
USF1P22415 AC022616.4-201ENST00000522985 181 ntBASIC0.45□□□□□ -2.34
USF1P22415 AC018659.1-201ENST00000551083 169 ntBASIC0.45□□□□□ -2.34
USF1P22415 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
USF1P22415 RNU6-1301P-201ENST00000362724 104 ntBASIC0.44□□□□□ -2.34
USF1P22415 RNA5SP499-201ENST00000363982 119 ntBASIC0.44□□□□□ -2.34
USF1P22415 RNU4-24P-201ENST00000364565 139 ntBASIC0.44□□□□□ -2.34
USF1P22415 RNU4-75P-201ENST00000364621 146 ntBASIC0.44□□□□□ -2.34
USF1P22415 Y_RNA.473-201ENST00000384333 102 ntBASIC0.44□□□□□ -2.34
USF1P22415 Y_RNA.554-201ENST00000384672 102 ntBASIC0.44□□□□□ -2.34
USF1P22415 RNU6-1067P-201ENST00000384752 107 ntBASIC0.44□□□□□ -2.34
USF1P22415 SNORD111-201ENST00000408139 94 ntBASIC0.44□□□□□ -2.34
USF1P22415 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
USF1P22415 AC092423.1-201ENST00000430165 186 ntBASIC0.44□□□□□ -2.34
USF1P22415 RPS29P25-201ENST00000481709 171 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 152.6 ms