Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RNU6-702P-201ENST00000364982 107 ntBASIC-1.73□□□□□ -2.69
HMGA1P17096 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.73□□□□□ -2.69
HMGA1P17096 MIR147A-201ENST00000385079 72 ntBASIC-1.73□□□□□ -2.69
HMGA1P17096 AC092447.3-201ENST00000426027 686 ntBASIC-1.73□□□□□ -2.69
HMGA1P17096 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-1.73□□□□□ -2.69
HMGA1P17096 FCF1P4-201ENST00000448326 183 ntBASIC-1.73□□□□□ -2.69
HMGA1P17096 HGF-207ENST00000453018 721 ntTSL 3 BASIC-1.73□□□□□ -2.69
HMGA1P17096 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.73□□□□□ -2.69
HMGA1P17096 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.73□□□□□ -2.69
HMGA1P17096 AC012414.2-201ENST00000559474 187 ntBASIC-1.73□□□□□ -2.69
HMGA1P17096 MIR3179-1-201ENST00000578940 84 ntBASIC-1.73□□□□□ -2.69
HMGA1P17096 MIR3179-2-201ENST00000579107 84 ntBASIC-1.73□□□□□ -2.69
HMGA1P17096 MIR3179-3-201ENST00000579566 84 ntBASIC-1.73□□□□□ -2.69
HMGA1P17096 MIR4280-201ENST00000582178 76 ntBASIC-1.73□□□□□ -2.69
HMGA1P17096 AL133255.1-201ENST00000606374 441 ntBASIC-1.73□□□□□ -2.69
HMGA1P17096 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-1.73□□□□□ -2.69
HMGA1P17096 MIR3179-4-201ENST00000617599 84 ntBASIC-1.73□□□□□ -2.69
HMGA1P17096 AC006435.5-201ENST00000624486 112 ntBASIC-1.73□□□□□ -2.69
HMGA1P17096 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.74□□□□□ -2.69
HMGA1P17096 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.74□□□□□ -2.69
HMGA1P17096 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.74□□□□□ -2.69
HMGA1P17096 RNY3P13-201ENST00000365542 102 ntBASIC-1.74□□□□□ -2.69
HMGA1P17096 RNU6-901P-201ENST00000384593 106 ntBASIC-1.74□□□□□ -2.69
HMGA1P17096 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.74□□□□□ -2.69
HMGA1P17096 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.74□□□□□ -2.69
HMGA1P17096 RNU4-83P-201ENST00000410863 133 ntBASIC-1.74□□□□□ -2.69
HMGA1P17096 MTCO3P19-201ENST00000415864 321 ntBASIC-1.74□□□□□ -2.69
HMGA1P17096 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.74□□□□□ -2.69
HMGA1P17096 BX276092.1-201ENST00000427368 251 ntBASIC-1.74□□□□□ -2.69
HMGA1P17096 USP9YP16-201ENST00000430287 407 ntBASIC-1.74□□□□□ -2.69
HMGA1P17096 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-1.74□□□□□ -2.69
HMGA1P17096 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-1.74□□□□□ -2.69
HMGA1P17096 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.74□□□□□ -2.69
HMGA1P17096 ADI1P3-201ENST00000549509 470 ntBASIC-1.74□□□□□ -2.69
HMGA1P17096 AC104072.1-201ENST00000568817 668 ntBASIC-1.74□□□□□ -2.69
HMGA1P17096 MIR5692A1-201ENST00000580523 69 ntBASIC-1.74□□□□□ -2.69
HMGA1P17096 AF250324.2-201ENST00000608299 610 ntBASIC-1.74□□□□□ -2.69
HMGA1P17096 AC091948.2-201ENST00000636510 279 ntBASIC-1.74□□□□□ -2.69
HMGA1P17096 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.75□□□□□ -2.69
HMGA1P17096 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.75□□□□□ -2.69
HMGA1P17096 MIR487A-201ENST00000385009 80 ntBASIC-1.75□□□□□ -2.69
HMGA1P17096 U8.17-201ENST00000391292 132 ntBASIC-1.75□□□□□ -2.69
HMGA1P17096 EEF1A1P40-201ENST00000412883 573 ntBASIC-1.75□□□□□ -2.69
HMGA1P17096 AC108059.2-201ENST00000434626 151 ntBASIC-1.75□□□□□ -2.69
HMGA1P17096 AL031274.1-201ENST00000450334 232 ntBASIC-1.75□□□□□ -2.69
HMGA1P17096 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-1.75□□□□□ -2.69
HMGA1P17096 RNU7-182P-201ENST00000459009 62 ntBASIC-1.75□□□□□ -2.69
HMGA1P17096 EIF1AXP2-201ENST00000555940 413 ntBASIC-1.75□□□□□ -2.69
HMGA1P17096 AC073539.2-201ENST00000597113 165 ntBASIC-1.75□□□□□ -2.69
HMGA1P17096 AP001836.1-201ENST00000604675 523 ntBASIC-1.75□□□□□ -2.69
HMGA1P17096 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.75□□□□□ -2.69
HMGA1P17096 RNU5B-1-201ENST00000363286 116 ntBASIC-1.76□□□□□ -2.69
HMGA1P17096 RNU6-960P-201ENST00000364056 120 ntBASIC-1.76□□□□□ -2.69
HMGA1P17096 SNORD87-201ENST00000364849 89 ntBASIC-1.76□□□□□ -2.69
HMGA1P17096 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.76□□□□□ -2.69
HMGA1P17096 Y_RNA.408-201ENST00000383987 102 ntBASIC-1.76□□□□□ -2.69
HMGA1P17096 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.76□□□□□ -2.69
HMGA1P17096 SNORD56B-201ENST00000384713 71 ntBASIC-1.76□□□□□ -2.69
HMGA1P17096 U8.15-201ENST00000390947 134 ntBASIC-1.76□□□□□ -2.69
HMGA1P17096 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.76□□□□□ -2.69
HMGA1P17096 RNU6-732P-201ENST00000516033 103 ntBASIC-1.76□□□□□ -2.69
HMGA1P17096 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.76□□□□□ -2.69
HMGA1P17096 AC100814.1-201ENST00000606963 623 ntBASIC-1.76□□□□□ -2.69
HMGA1P17096 AC073869.9-201ENST00000641610 120 ntBASIC-1.76□□□□□ -2.69
HMGA1P17096 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.77□□□□□ -2.69
HMGA1P17096 RNU6-855P-201ENST00000410395 104 ntBASIC-1.77□□□□□ -2.69
HMGA1P17096 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-1.77□□□□□ -2.69
HMGA1P17096 SNORD65B-201ENST00000459126 73 ntBASIC-1.77□□□□□ -2.69
HMGA1P17096 AC117522.1-201ENST00000509821 380 ntBASIC-1.77□□□□□ -2.69
HMGA1P17096 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-1.77□□□□□ -2.69
HMGA1P17096 AC012409.4-201ENST00000612923 249 ntBASIC-1.77□□□□□ -2.69
HMGA1P17096 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.78□□□□□ -2.69
HMGA1P17096 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.78□□□□□ -2.69
HMGA1P17096 Y_RNA.311-201ENST00000365068 96 ntBASIC-1.78□□□□□ -2.69
HMGA1P17096 RNU6-609P-201ENST00000365459 107 ntBASIC-1.78□□□□□ -2.69
HMGA1P17096 RNU6-540P-201ENST00000384622 101 ntBASIC-1.78□□□□□ -2.69
HMGA1P17096 MIR8485-201ENST00000401372 91 ntBASIC-1.78□□□□□ -2.69
HMGA1P17096 SNRPGP10-201ENST00000432323 225 ntBASIC-1.78□□□□□ -2.69
HMGA1P17096 RNA5SP272-201ENST00000516095 111 ntBASIC-1.78□□□□□ -2.69
HMGA1P17096 AC087683.1-201ENST00000591187 441 ntBASIC-1.78□□□□□ -2.69
HMGA1P17096 AL158050.2-201ENST00000605336 568 ntBASIC-1.78□□□□□ -2.69
HMGA1P17096 AC068880.4-201ENST00000623082 495 ntBASIC-1.78□□□□□ -2.69
HMGA1P17096 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.79□□□□□ -2.7
HMGA1P17096 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.79□□□□□ -2.7
HMGA1P17096 RNU6-371P-201ENST00000364283 108 ntBASIC-1.79□□□□□ -2.7
HMGA1P17096 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.79□□□□□ -2.7
HMGA1P17096 U6.112-201ENST00000384129 70 ntBASIC-1.79□□□□□ -2.7
HMGA1P17096 MIR588-201ENST00000384900 83 ntBASIC-1.79□□□□□ -2.7
HMGA1P17096 MIR320B2-201ENST00000408479 138 ntBASIC-1.79□□□□□ -2.7
HMGA1P17096 SNORD93-201ENST00000408813 74 ntBASIC-1.79□□□□□ -2.7
HMGA1P17096 RNU2-62P-201ENST00000410868 191 ntBASIC-1.79□□□□□ -2.7
HMGA1P17096 AL031667.1-201ENST00000440222 725 ntBASIC-1.79□□□□□ -2.7
HMGA1P17096 AL359672.1-201ENST00000442302 409 ntBASIC-1.79□□□□□ -2.7
HMGA1P17096 RPL30P15-201ENST00000457129 321 ntBASIC-1.79□□□□□ -2.7
HMGA1P17096 AC108729.2-201ENST00000476543 840 ntBASIC-1.79□□□□□ -2.7
HMGA1P17096 AF186996.7-201ENST00000492781 209 ntBASIC-1.79□□□□□ -2.7
HMGA1P17096 AC011352.1-201ENST00000512300 793 ntBASIC-1.79□□□□□ -2.7
HMGA1P17096 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.79□□□□□ -2.7
HMGA1P17096 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.79□□□□□ -2.7
HMGA1P17096 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.79□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms