Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.14□□□□□ -2.59
HIST1H1DP16402 Y_RNA.608-201ENST00000410647 95 ntBASIC-1.14□□□□□ -2.59
HIST1H1DP16402 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.14□□□□□ -2.59
HIST1H1DP16402 MTND3P1-201ENST00000441336 220 ntBASIC-1.14□□□□□ -2.59
HIST1H1DP16402 RPL23AP75-201ENST00000491601 451 ntBASIC-1.14□□□□□ -2.59
HIST1H1DP16402 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.14□□□□□ -2.59
HIST1H1DP16402 AC074198.2-201ENST00000508153 258 ntBASIC-1.14□□□□□ -2.59
HIST1H1DP16402 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.14□□□□□ -2.59
HIST1H1DP16402 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.14□□□□□ -2.59
HIST1H1DP16402 MIR4791-201ENST00000607666 84 ntBASIC-1.14□□□□□ -2.59
HIST1H1DP16402 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-1.14□□□□□ -2.59
HIST1H1DP16402 RNU6-136P-201ENST00000384663 107 ntBASIC-1.15□□□□□ -2.59
HIST1H1DP16402 MIR196A1-201ENST00000388006 70 ntBASIC-1.15□□□□□ -2.59
HIST1H1DP16402 RNU7-138P-201ENST00000459479 64 ntBASIC-1.15□□□□□ -2.59
HIST1H1DP16402 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.15□□□□□ -2.59
HIST1H1DP16402 RNU6-830P-201ENST00000516353 107 ntBASIC-1.15□□□□□ -2.59
HIST1H1DP16402 AC105029.1-201ENST00000520250 669 ntBASIC-1.15□□□□□ -2.59
HIST1H1DP16402 MIR3681-201ENST00000580089 72 ntBASIC-1.15□□□□□ -2.59
HIST1H1DP16402 AC069431.2-201ENST00000604149 1099 ntBASIC-1.15□□□□□ -2.59
HIST1H1DP16402 MIR7111-201ENST00000619751 72 ntBASIC-1.15□□□□□ -2.59
HIST1H1DP16402 AL163152.1-201ENST00000642001 374 ntBASIC-1.15□□□□□ -2.59
HIST1H1DP16402 U8.6-201ENST00000364939 135 ntBASIC-1.16□□□□□ -2.6
HIST1H1DP16402 RNU6-169P-201ENST00000365336 107 ntBASIC-1.16□□□□□ -2.6
HIST1H1DP16402 RNU6-784P-201ENST00000384330 106 ntBASIC-1.16□□□□□ -2.6
HIST1H1DP16402 MIR518F-201ENST00000384973 87 ntBASIC-1.16□□□□□ -2.6
HIST1H1DP16402 MTCO2P27-201ENST00000420740 428 ntBASIC-1.16□□□□□ -2.6
HIST1H1DP16402 RNU7-167P-201ENST00000459160 62 ntBASIC-1.16□□□□□ -2.6
HIST1H1DP16402 RNU6-329P-201ENST00000459618 107 ntBASIC-1.16□□□□□ -2.6
HIST1H1DP16402 GMFBP1-201ENST00000467831 427 ntBASIC-1.16□□□□□ -2.6
HIST1H1DP16402 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.16□□□□□ -2.6
HIST1H1DP16402 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.16□□□□□ -2.6
HIST1H1DP16402 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.16□□□□□ -2.6
HIST1H1DP16402 SNORD27.1-201ENST00000516319 72 ntBASIC-1.16□□□□□ -2.6
HIST1H1DP16402 AC090572.1-201ENST00000519251 160 ntBASIC-1.16□□□□□ -2.6
HIST1H1DP16402 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.16□□□□□ -2.6
HIST1H1DP16402 AC080013.3-201ENST00000606839 578 ntBASIC-1.16□□□□□ -2.6
HIST1H1DP16402 AL162376.1-201ENST00000624117 175 ntBASIC-1.16□□□□□ -2.6
HIST1H1DP16402 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.16□□□□□ -2.6
HIST1H1DP16402 Y_RNA.251-201ENST00000364551 99 ntBASIC-1.17□□□□□ -2.6
HIST1H1DP16402 RNU6-740P-201ENST00000364734 105 ntBASIC-1.17□□□□□ -2.6
HIST1H1DP16402 SNORA20.2-201ENST00000383922 131 ntBASIC-1.17□□□□□ -2.6
HIST1H1DP16402 SNORA75.4-201ENST00000391278 119 ntBASIC-1.17□□□□□ -2.6
HIST1H1DP16402 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.17□□□□□ -2.6
HIST1H1DP16402 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.17□□□□□ -2.6
HIST1H1DP16402 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.17□□□□□ -2.6
HIST1H1DP16402 SNRPGP10-201ENST00000432323 225 ntBASIC-1.17□□□□□ -2.6
HIST1H1DP16402 AC093303.1-201ENST00000514549 295 ntBASIC-1.17□□□□□ -2.6
HIST1H1DP16402 RNU6-758P-201ENST00000516292 89 ntBASIC-1.17□□□□□ -2.6
HIST1H1DP16402 RNU6-410P-201ENST00000517006 107 ntBASIC-1.17□□□□□ -2.6
HIST1H1DP16402 RNA5SP66-201ENST00000517178 101 ntBASIC-1.17□□□□□ -2.6
HIST1H1DP16402 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.17□□□□□ -2.6
HIST1H1DP16402 AC108676.2-201ENST00000605225 163 ntBASIC-1.17□□□□□ -2.6
HIST1H1DP16402 RNU6-1192P-201ENST00000612197 107 ntBASIC-1.17□□□□□ -2.6
HIST1H1DP16402 RNU6-489P-201ENST00000618289 107 ntBASIC-1.17□□□□□ -2.6
HIST1H1DP16402 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.17□□□□□ -2.6
HIST1H1DP16402 SEPT14P19-203ENST00000633205 211 ntBASIC-1.17□□□□□ -2.6
HIST1H1DP16402 SNORD115-32-201ENST00000364079 82 ntBASIC-1.18□□□□□ -2.6
HIST1H1DP16402 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.18□□□□□ -2.6
HIST1H1DP16402 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.18□□□□□ -2.6
HIST1H1DP16402 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.18□□□□□ -2.6
HIST1H1DP16402 SNORD38C-201ENST00000384381 69 ntBASIC-1.18□□□□□ -2.6
HIST1H1DP16402 SNORD73A-201ENST00000386062 65 ntBASIC-1.18□□□□□ -2.6
HIST1H1DP16402 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.18□□□□□ -2.6
HIST1H1DP16402 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.18□□□□□ -2.6
HIST1H1DP16402 MTATP6P20-201ENST00000414147 562 ntBASIC-1.18□□□□□ -2.6
HIST1H1DP16402 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.18□□□□□ -2.6
HIST1H1DP16402 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-1.18□□□□□ -2.6
HIST1H1DP16402 AC016550.1-201ENST00000505348 785 ntBASIC-1.18□□□□□ -2.6
HIST1H1DP16402 AL157687.1-201ENST00000554853 619 ntBASIC-1.18□□□□□ -2.6
HIST1H1DP16402 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.18□□□□□ -2.6
HIST1H1DP16402 AC105081.1-201ENST00000617727 106 ntBASIC-1.18□□□□□ -2.6
HIST1H1DP16402 AL589826.1-201ENST00000340697 249 ntBASIC-1.19□□□□□ -2.6
HIST1H1DP16402 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.19□□□□□ -2.6
HIST1H1DP16402 RNU6-931P-201ENST00000363850 107 ntBASIC-1.19□□□□□ -2.6
HIST1H1DP16402 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.19□□□□□ -2.6
HIST1H1DP16402 SNORD50B-201ENST00000364995 70 ntBASIC-1.19□□□□□ -2.6
HIST1H1DP16402 RNY1P7-201ENST00000384743 110 ntBASIC-1.19□□□□□ -2.6
HIST1H1DP16402 MT-TF-201ENST00000387314 71 ntBASIC-1.19□□□□□ -2.6
HIST1H1DP16402 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.19□□□□□ -2.6
HIST1H1DP16402 RNU4-63P-201ENST00000411313 118 ntBASIC-1.19□□□□□ -2.6
HIST1H1DP16402 AL138752.1-201ENST00000452964 351 ntBASIC-1.19□□□□□ -2.6
HIST1H1DP16402 SCARNA18-201ENST00000459004 134 ntBASIC-1.19□□□□□ -2.6
HIST1H1DP16402 AC105417.1-201ENST00000514691 285 ntBASIC-1.19□□□□□ -2.6
HIST1H1DP16402 RNU2-13P-201ENST00000515909 113 ntBASIC-1.19□□□□□ -2.6
HIST1H1DP16402 SCOCP1-201ENST00000554676 349 ntBASIC-1.19□□□□□ -2.6
HIST1H1DP16402 AP001330.5-201ENST00000607176 411 ntBASIC-1.19□□□□□ -2.6
HIST1H1DP16402 AC084368.1-201ENST00000620935 65 ntBASIC-1.19□□□□□ -2.6
HIST1H1DP16402 AC023510.2-201ENST00000622162 746 ntBASIC-1.19□□□□□ -2.6
HIST1H1DP16402 RNU6-280P-201ENST00000364145 104 ntBASIC-1.2□□□□□ -2.6
HIST1H1DP16402 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.2□□□□□ -2.6
HIST1H1DP16402 SNORA22B-201ENST00000383876 138 ntBASIC-1.2□□□□□ -2.6
HIST1H1DP16402 SNORA1-201ENST00000384107 130 ntBASIC-1.2□□□□□ -2.6
HIST1H1DP16402 MIR588-201ENST00000384900 83 ntBASIC-1.2□□□□□ -2.6
HIST1H1DP16402 U8.17-201ENST00000391292 132 ntBASIC-1.2□□□□□ -2.6
HIST1H1DP16402 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.2□□□□□ -2.6
HIST1H1DP16402 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-1.2□□□□□ -2.6
HIST1H1DP16402 AL354751.2-201ENST00000415471 210 ntBASIC-1.2□□□□□ -2.6
HIST1H1DP16402 AL008987.1-201ENST00000415528 237 ntBASIC-1.2□□□□□ -2.6
HIST1H1DP16402 Z95118.1-201ENST00000421372 247 ntBASIC-1.2□□□□□ -2.6
HIST1H1DP16402 Y_RNA.672-201ENST00000516289 104 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms