Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 PIGPP3-201ENST00000425307 415 ntBASIC0.8□□□□□ -2.28
CCDC130P13994 AC004941.2-201ENST00000427009 228 ntBASIC0.8□□□□□ -2.28
CCDC130P13994 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.8□□□□□ -2.28
CCDC130P13994 RNU6-120P-201ENST00000516077 103 ntBASIC0.8□□□□□ -2.28
CCDC130P13994 RNU6-358P-201ENST00000516564 75 ntBASIC0.8□□□□□ -2.28
CCDC130P13994 MIR2355-201ENST00000517199 87 ntBASIC0.8□□□□□ -2.28
CCDC130P13994 RNU2-12P-201ENST00000517216 168 ntBASIC0.8□□□□□ -2.28
CCDC130P13994 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
CCDC130P13994 AL391903.3-201ENST00000612158 163 ntBASIC0.8□□□□□ -2.28
CCDC130P13994 AC092794.2-201ENST00000620933 563 ntBASIC0.8□□□□□ -2.28
CCDC130P13994 RNU6-961P-201ENST00000363893 105 ntBASIC0.79□□□□□ -2.28
CCDC130P13994 SNORD115-30-201ENST00000364117 82 ntBASIC0.79□□□□□ -2.28
CCDC130P13994 RNU6-1310P-201ENST00000384153 107 ntBASIC0.79□□□□□ -2.28
CCDC130P13994 MIR200A-201ENST00000384875 90 ntBASIC0.79□□□□□ -2.28
CCDC130P13994 FCF1P9-201ENST00000412546 282 ntBASIC0.79□□□□□ -2.28
CCDC130P13994 RPL23AP50-201ENST00000434149 455 ntBASIC0.79□□□□□ -2.28
CCDC130P13994 RPEP5-201ENST00000441137 268 ntBASIC0.79□□□□□ -2.28
CCDC130P13994 RPL39P39-201ENST00000455840 151 ntBASIC0.79□□□□□ -2.28
CCDC130P13994 RPL17P19-201ENST00000489069 552 ntBASIC0.79□□□□□ -2.28
CCDC130P13994 RNU6-1213P-201ENST00000517075 94 ntBASIC0.79□□□□□ -2.28
CCDC130P13994 AC084782.3-201ENST00000612282 578 ntBASIC0.79□□□□□ -2.28
CCDC130P13994 AC087588.2-201ENST00000617667 426 ntBASIC0.79□□□□□ -2.28
CCDC130P13994 MIR6866-201ENST00000638146 69 ntBASIC0.79□□□□□ -2.28
CCDC130P13994 RNU6-99P-201ENST00000364721 107 ntBASIC0.78□□□□□ -2.28
CCDC130P13994 MIR608-201ENST00000384820 100 ntBASIC0.78□□□□□ -2.28
CCDC130P13994 MIR100-201ENST00000385259 80 ntBASIC0.78□□□□□ -2.28
CCDC130P13994 SNORA75.4-201ENST00000391278 119 ntBASIC0.78□□□□□ -2.28
CCDC130P13994 MIR942-201ENST00000401111 86 ntBASIC0.78□□□□□ -2.28
CCDC130P13994 MIR891A-201ENST00000401237 79 ntBASIC0.78□□□□□ -2.28
CCDC130P13994 RNU4-14P-201ENST00000410858 122 ntBASIC0.78□□□□□ -2.28
CCDC130P13994 AC006461.1-201ENST00000412637 326 ntBASIC0.78□□□□□ -2.28
CCDC130P13994 RPS3AP1-201ENST00000413190 320 ntBASIC0.78□□□□□ -2.28
CCDC130P13994 LINC01399-202ENST00000458450 244 ntBASIC0.78□□□□□ -2.28
CCDC130P13994 AC114811.1-201ENST00000507207 168 ntBASIC0.78□□□□□ -2.28
CCDC130P13994 RNU6-408P-201ENST00000515910 100 ntBASIC0.78□□□□□ -2.28
CCDC130P13994 SNORA25.10-201ENST00000515926 124 ntBASIC0.78□□□□□ -2.28
CCDC130P13994 AC136628.3-201ENST00000521868 290 ntBASIC0.78□□□□□ -2.28
CCDC130P13994 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.78□□□□□ -2.28
CCDC130P13994 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.78□□□□□ -2.28
CCDC130P13994 AC120024.3-201ENST00000603167 156 ntBASIC0.78□□□□□ -2.28
CCDC130P13994 AC004467.1-201ENST00000615678 330 ntBASIC0.78□□□□□ -2.28
CCDC130P13994 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.78□□□□□ -2.28
CCDC130P13994 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
CCDC130P13994 Y_RNA.172-201ENST00000363765 102 ntBASIC0.77□□□□□ -2.29
CCDC130P13994 Y_RNA.336-201ENST00000365307 109 ntBASIC0.77□□□□□ -2.29
CCDC130P13994 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
CCDC130P13994 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.77□□□□□ -2.29
CCDC130P13994 AL162725.1-201ENST00000435405 301 ntBASIC0.77□□□□□ -2.29
CCDC130P13994 ELOCP24-201ENST00000456370 334 ntBASIC0.77□□□□□ -2.29
CCDC130P13994 AC245047.8-201ENST00000456455 284 ntBASIC0.77□□□□□ -2.29
CCDC130P13994 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.77□□□□□ -2.29
CCDC130P13994 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.77□□□□□ -2.29
CCDC130P13994 RNU6-1337P-201ENST00000516525 95 ntBASIC0.77□□□□□ -2.29
CCDC130P13994 AL591926.4-201ENST00000616895 298 ntBASIC0.77□□□□□ -2.29
CCDC130P13994 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CCDC130P13994 RNU6-767P-201ENST00000384132 107 ntBASIC0.76□□□□□ -2.29
CCDC130P13994 RNU6-163P-201ENST00000384396 106 ntBASIC0.76□□□□□ -2.29
CCDC130P13994 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
CCDC130P13994 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.76□□□□□ -2.29
CCDC130P13994 MTND1P4-201ENST00000435196 415 ntBASIC0.76□□□□□ -2.29
CCDC130P13994 FGF7P6-202ENST00000451282 293 ntBASIC0.76□□□□□ -2.29
CCDC130P13994 MIR2053-201ENST00000459295 91 ntBASIC0.76□□□□□ -2.29
CCDC130P13994 AC117454.1-201ENST00000491120 168 ntBASIC0.76□□□□□ -2.29
CCDC130P13994 CYCTP-201ENST00000504253 315 ntBASIC0.76□□□□□ -2.29
CCDC130P13994 SNORD111.1-201ENST00000516421 86 ntBASIC0.76□□□□□ -2.29
CCDC130P13994 RNU7-30P-201ENST00000516835 62 ntBASIC0.76□□□□□ -2.29
CCDC130P13994 AP003716.2-201ENST00000528260 108 ntBASIC0.76□□□□□ -2.29
CCDC130P13994 AC023442.1-201ENST00000531247 422 ntBASIC0.76□□□□□ -2.29
CCDC130P13994 MIR5000-201ENST00000577717 103 ntBASIC0.76□□□□□ -2.29
CCDC130P13994 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.76□□□□□ -2.29
CCDC130P13994 MIR6835-201ENST00000621552 64 ntBASIC0.76□□□□□ -2.29
CCDC130P13994 AC027279.3-201ENST00000625055 122 ntBASIC0.76□□□□□ -2.29
CCDC130P13994 Y_RNA.101-201ENST00000363154 102 ntBASIC0.75□□□□□ -2.29
CCDC130P13994 SNORD68-201ENST00000363214 84 ntBASIC0.75□□□□□ -2.29
CCDC130P13994 Y_RNA.393-201ENST00000383936 102 ntBASIC0.75□□□□□ -2.29
CCDC130P13994 SNORD116-13-201ENST00000384408 92 ntBASIC0.75□□□□□ -2.29
CCDC130P13994 RNU6-1105P-201ENST00000384774 107 ntBASIC0.75□□□□□ -2.29
CCDC130P13994 MIR508-201ENST00000384857 115 ntBASIC0.75□□□□□ -2.29
CCDC130P13994 MIR605-201ENST00000385078 83 ntBASIC0.75□□□□□ -2.29
CCDC130P13994 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.75□□□□□ -2.29
CCDC130P13994 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.75□□□□□ -2.29
CCDC130P13994 AC093019.1-201ENST00000443135 252 ntBASIC0.75□□□□□ -2.29
CCDC130P13994 SNORA70.12-201ENST00000516084 153 ntBASIC0.75□□□□□ -2.29
CCDC130P13994 RNU6-966P-201ENST00000516479 104 ntBASIC0.75□□□□□ -2.29
CCDC130P13994 MIR4714-201ENST00000580728 77 ntBASIC0.75□□□□□ -2.29
CCDC130P13994 AC106800.4-201ENST00000614905 153 ntBASIC0.75□□□□□ -2.29
CCDC130P13994 AL669831.3-213ENST00000636676 183 ntBASIC0.75□□□□□ -2.29
CCDC130P13994 MIR625-201ENST00000385047 85 ntBASIC0.74□□□□□ -2.29
CCDC130P13994 MIR1298-201ENST00000408783 112 ntBASIC0.74□□□□□ -2.29
CCDC130P13994 MTND4P28-201ENST00000426217 387 ntBASIC0.74□□□□□ -2.29
CCDC130P13994 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.74□□□□□ -2.29
CCDC130P13994 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.74□□□□□ -2.29
CCDC130P13994 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.74□□□□□ -2.29
CCDC130P13994 Y_RNA.691-201ENST00000516611 103 ntBASIC0.74□□□□□ -2.29
CCDC130P13994 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.74□□□□□ -2.29
CCDC130P13994 MIR4762-201ENST00000585261 75 ntBASIC0.74□□□□□ -2.29
CCDC130P13994 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
CCDC130P13994 HSBP1P2-201ENST00000299671 229 ntBASIC0.73□□□□□ -2.29
CCDC130P13994 Y_RNA.166-201ENST00000363730 102 ntBASIC0.73□□□□□ -2.29
CCDC130P13994 RNA5SP325-201ENST00000363756 130 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms