Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC090897.1-201ENST00000580909 226 ntBASIC-0.29□□□□□ -2.46
TPM1P09493 MIR4264-201ENST00000583520 66 ntBASIC-0.29□□□□□ -2.46
TPM1P09493 AC073648.5-201ENST00000603502 305 ntBASIC-0.29□□□□□ -2.46
TPM1P09493 AC027449.1-201ENST00000608890 407 ntBASIC-0.29□□□□□ -2.46
TPM1P09493 AC091931.1-201ENST00000623488 728 ntBASIC-0.29□□□□□ -2.46
TPM1P09493 SNORA9.1-201ENST00000362412 131 ntBASIC-0.3□□□□□ -2.46
TPM1P09493 RNU6-595P-201ENST00000363944 107 ntBASIC-0.3□□□□□ -2.46
TPM1P09493 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.3□□□□□ -2.46
TPM1P09493 Y_RNA.296-201ENST00000364930 108 ntBASIC-0.3□□□□□ -2.46
TPM1P09493 SNORA51.10-201ENST00000384418 136 ntBASIC-0.3□□□□□ -2.46
TPM1P09493 MIR570-201ENST00000384917 97 ntBASIC-0.3□□□□□ -2.46
TPM1P09493 MIR938-201ENST00000401216 83 ntBASIC-0.3□□□□□ -2.46
TPM1P09493 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.3□□□□□ -2.46
TPM1P09493 AL445567.1-201ENST00000439121 144 ntBASIC-0.3□□□□□ -2.46
TPM1P09493 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.3□□□□□ -2.46
TPM1P09493 RNU6-89P-201ENST00000606519 100 ntBASIC-0.3□□□□□ -2.46
TPM1P09493 AL603755.1-201ENST00000619504 163 ntBASIC-0.3□□□□□ -2.46
TPM1P09493 ZNF299P-201ENST00000406845 1804 ntBASIC-0.3□□□□□ -2.46
TPM1P09493 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.31□□□□□ -2.46
TPM1P09493 SNORD114-26-201ENST00000363543 72 ntBASIC-0.31□□□□□ -2.46
TPM1P09493 MTCO2P33-201ENST00000402100 465 ntBASIC-0.31□□□□□ -2.46
TPM1P09493 RNU6-648P-201ENST00000410190 107 ntBASIC-0.31□□□□□ -2.46
TPM1P09493 U8.19-201ENST00000459095 133 ntBASIC-0.31□□□□□ -2.46
TPM1P09493 U8.22-201ENST00000459141 133 ntBASIC-0.31□□□□□ -2.46
TPM1P09493 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.31□□□□□ -2.46
TPM1P09493 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.31□□□□□ -2.46
TPM1P09493 AC141557.1-201ENST00000540982 400 ntBASIC-0.31□□□□□ -2.46
TPM1P09493 RPL23AP91-201ENST00000569211 455 ntBASIC-0.31□□□□□ -2.46
TPM1P09493 MIR6515-201ENST00000619843 57 ntBASIC-0.31□□□□□ -2.46
TPM1P09493 SNORD38C-201ENST00000384381 69 ntBASIC-0.32□□□□□ -2.46
TPM1P09493 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.32□□□□□ -2.46
TPM1P09493 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.32□□□□□ -2.46
TPM1P09493 RNA5SP496-201ENST00000391240 109 ntBASIC-0.32□□□□□ -2.46
TPM1P09493 RNU4-55P-201ENST00000410731 137 ntBASIC-0.32□□□□□ -2.46
TPM1P09493 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.32□□□□□ -2.46
TPM1P09493 RNU6-625P-201ENST00000459412 107 ntBASIC-0.32□□□□□ -2.46
TPM1P09493 AC240442.1-201ENST00000616055 283 ntBASIC-0.32□□□□□ -2.46
TPM1P09493 RN7SKP142-201ENST00000411236 328 ntBASIC-0.33□□□□□ -2.46
TPM1P09493 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.33□□□□□ -2.46
TPM1P09493 RNU6-835P-201ENST00000516974 104 ntBASIC-0.33□□□□□ -2.46
TPM1P09493 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.33□□□□□ -2.46
TPM1P09493 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.33□□□□□ -2.46
TPM1P09493 MIR3678-201ENST00000578455 94 ntBASIC-0.33□□□□□ -2.46
TPM1P09493 MIR4273-201ENST00000582824 84 ntBASIC-0.33□□□□□ -2.46
TPM1P09493 AC010525.2-201ENST00000590920 195 ntBASIC-0.33□□□□□ -2.46
TPM1P09493 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.33□□□□□ -2.46
TPM1P09493 RNU6-596P-201ENST00000365395 98 ntBASIC-0.34□□□□□ -2.46
TPM1P09493 RNU6-125P-201ENST00000384505 107 ntBASIC-0.34□□□□□ -2.46
TPM1P09493 MIR610-201ENST00000385139 96 ntBASIC-0.34□□□□□ -2.46
TPM1P09493 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.34□□□□□ -2.46
TPM1P09493 SNRPGP10-201ENST00000432323 225 ntBASIC-0.34□□□□□ -2.46
TPM1P09493 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.34□□□□□ -2.46
TPM1P09493 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.34□□□□□ -2.46
TPM1P09493 RNU6-830P-201ENST00000516353 107 ntBASIC-0.34□□□□□ -2.46
TPM1P09493 ZNF519P2-201ENST00000557032 169 ntBASIC-0.34□□□□□ -2.46
TPM1P09493 uc_338.4-201ENST00000616635 176 ntBASIC-0.34□□□□□ -2.46
TPM1P09493 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.34□□□□□ -2.46
TPM1P09493 Z69908.1-201ENST00000622603 247 ntBASIC-0.34□□□□□ -2.46
TPM1P09493 MTND1P7-201ENST00000632801 297 ntBASIC-0.34□□□□□ -2.46
TPM1P09493 SNORD14E-201ENST00000364009 85 ntBASIC-0.35□□□□□ -2.47
TPM1P09493 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.35□□□□□ -2.47
TPM1P09493 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.35□□□□□ -2.47
TPM1P09493 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.35□□□□□ -2.47
TPM1P09493 AC092989.1-201ENST00000481235 277 ntBASIC-0.35□□□□□ -2.47
TPM1P09493 MIR598-201ENST00000384868 97 ntBASIC-0.36□□□□□ -2.47
TPM1P09493 BTF3P11-201ENST00000426582 477 ntBASIC-0.36□□□□□ -2.47
TPM1P09493 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.36□□□□□ -2.47
TPM1P09493 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.36□□□□□ -2.47
TPM1P09493 MIR5190-201ENST00000581537 80 ntBASIC-0.36□□□□□ -2.47
TPM1P09493 MIR3124-201ENST00000582636 67 ntBASIC-0.36□□□□□ -2.47
TPM1P09493 AC008608.1-201ENST00000603910 127 ntBASIC-0.36□□□□□ -2.47
TPM1P09493 AL050303.3-201ENST00000613704 284 ntBASIC-0.36□□□□□ -2.47
TPM1P09493 AC023510.2-201ENST00000622162 746 ntBASIC-0.36□□□□□ -2.47
TPM1P09493 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.37□□□□□ -2.47
TPM1P09493 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.37□□□□□ -2.47
TPM1P09493 SNORD115-30-201ENST00000364117 82 ntBASIC-0.37□□□□□ -2.47
TPM1P09493 SNORA32.1-201ENST00000364514 115 ntBASIC-0.37□□□□□ -2.47
TPM1P09493 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.37□□□□□ -2.47
TPM1P09493 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.37□□□□□ -2.47
TPM1P09493 MIR644A-201ENST00000385262 94 ntBASIC-0.37□□□□□ -2.47
TPM1P09493 U8.17-201ENST00000391292 132 ntBASIC-0.37□□□□□ -2.47
TPM1P09493 MTCO2P27-201ENST00000420740 428 ntBASIC-0.37□□□□□ -2.47
TPM1P09493 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.37□□□□□ -2.47
TPM1P09493 HMGN1P10-201ENST00000474557 553 ntBASIC-0.37□□□□□ -2.47
TPM1P09493 RNA5SP268-201ENST00000516828 124 ntBASIC-0.37□□□□□ -2.47
TPM1P09493 AC087752.4-201ENST00000605911 462 ntBASIC-0.37□□□□□ -2.47
TPM1P09493 MIR4791-201ENST00000607666 84 ntBASIC-0.37□□□□□ -2.47
TPM1P09493 AC090517.2-201ENST00000614966 680 ntBASIC-0.37□□□□□ -2.47
TPM1P09493 Pinc.1-201ENST00000616452 154 ntBASIC-0.37□□□□□ -2.47
TPM1P09493 SNORA36.1-201ENST00000363424 132 ntBASIC-0.38□□□□□ -2.47
TPM1P09493 RNA5SP117-201ENST00000365294 118 ntBASIC-0.38□□□□□ -2.47
TPM1P09493 RNU6-364P-201ENST00000384387 107 ntBASIC-0.38□□□□□ -2.47
TPM1P09493 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.38□□□□□ -2.47
TPM1P09493 RNU6-747P-201ENST00000390928 104 ntBASIC-0.38□□□□□ -2.47
TPM1P09493 RNU6-700P-201ENST00000391043 107 ntBASIC-0.38□□□□□ -2.47
TPM1P09493 RNU6-241P-201ENST00000391148 104 ntBASIC-0.38□□□□□ -2.47
TPM1P09493 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.38□□□□□ -2.47
TPM1P09493 RNU6-447P-201ENST00000410293 104 ntBASIC-0.38□□□□□ -2.47
TPM1P09493 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.38□□□□□ -2.47
TPM1P09493 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms