Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
MT-ND4P03905 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.51□□□□□ -2.33
MT-ND4P03905 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
MT-ND4P03905 Y_RNA.172-201ENST00000363765 102 ntBASIC0.5□□□□□ -2.33
MT-ND4P03905 RNU6-99P-201ENST00000364721 107 ntBASIC0.5□□□□□ -2.33
MT-ND4P03905 MIR520C-201ENST00000385005 87 ntBASIC0.5□□□□□ -2.33
MT-ND4P03905 AL031003.1-201ENST00000404229 172 ntBASIC0.5□□□□□ -2.33
MT-ND4P03905 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.5□□□□□ -2.33
MT-ND4P03905 RPL23AP50-201ENST00000434149 455 ntBASIC0.5□□□□□ -2.33
MT-ND4P03905 COX6CP6-201ENST00000490840 228 ntBASIC0.5□□□□□ -2.33
MT-ND4P03905 AC113410.1-201ENST00000505029 247 ntBASIC0.5□□□□□ -2.33
MT-ND4P03905 AC004812.1-201ENST00000540773 146 ntBASIC0.5□□□□□ -2.33
MT-ND4P03905 CYP3A137P-201ENST00000562436 69 ntBASIC0.5□□□□□ -2.33
MT-ND4P03905 AC133485.1-201ENST00000567176 124 ntBASIC0.5□□□□□ -2.33
MT-ND4P03905 AC138907.6-201ENST00000568401 126 ntBASIC0.5□□□□□ -2.33
MT-ND4P03905 AC136443.5-201ENST00000603741 370 ntBASIC0.5□□□□□ -2.33
MT-ND4P03905 PISRT1.1-201ENST00000616930 107 ntBASIC0.5□□□□□ -2.33
MT-ND4P03905 Y_RNA.101-201ENST00000363154 102 ntBASIC0.49□□□□□ -2.33
MT-ND4P03905 Y_RNA.253-201ENST00000364562 112 ntBASIC0.49□□□□□ -2.33
MT-ND4P03905 AC117470.1-201ENST00000381974 330 ntBASIC0.49□□□□□ -2.33
MT-ND4P03905 RNU6-926P-201ENST00000384075 107 ntBASIC0.49□□□□□ -2.33
MT-ND4P03905 RNU6-1215P-201ENST00000384441 102 ntBASIC0.49□□□□□ -2.33
MT-ND4P03905 MIR522-201ENST00000385071 87 ntBASIC0.49□□□□□ -2.33
MT-ND4P03905 MIR136-201ENST00000385207 82 ntBASIC0.49□□□□□ -2.33
MT-ND4P03905 SNORD89-201ENST00000390981 114 ntBASIC0.49□□□□□ -2.33
MT-ND4P03905 SNORA75.4-201ENST00000391278 119 ntBASIC0.49□□□□□ -2.33
MT-ND4P03905 AL390729.2-201ENST00000416137 156 ntBASIC0.49□□□□□ -2.33
MT-ND4P03905 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.49□□□□□ -2.33
MT-ND4P03905 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
MT-ND4P03905 MIR2053-201ENST00000459295 91 ntBASIC0.49□□□□□ -2.33
MT-ND4P03905 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.49□□□□□ -2.33
MT-ND4P03905 RN7SKP164-201ENST00000516138 266 ntBASIC0.49□□□□□ -2.33
MT-ND4P03905 SNORA18.7-201ENST00000516910 131 ntBASIC0.49□□□□□ -2.33
MT-ND4P03905 RNU6-1213P-201ENST00000517075 94 ntBASIC0.49□□□□□ -2.33
MT-ND4P03905 MIR2355-201ENST00000517199 87 ntBASIC0.49□□□□□ -2.33
MT-ND4P03905 MTND4LP26-201ENST00000518144 282 ntBASIC0.49□□□□□ -2.33
MT-ND4P03905 AF235103.2-201ENST00000525753 346 ntBASIC0.49□□□□□ -2.33
MT-ND4P03905 MIR4764-201ENST00000580680 88 ntBASIC0.49□□□□□ -2.33
MT-ND4P03905 AC005899.2-201ENST00000584353 90 ntBASIC0.49□□□□□ -2.33
MT-ND4P03905 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.49□□□□□ -2.33
MT-ND4P03905 AC002553.4-201ENST00000616896 331 ntBASIC0.49□□□□□ -2.33
MT-ND4P03905 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
MT-ND4P03905 SNORD14.1-201ENST00000365609 90 ntBASIC0.48□□□□□ -2.33
MT-ND4P03905 MIR520E-201ENST00000384867 87 ntBASIC0.48□□□□□ -2.33
MT-ND4P03905 MIR1277-201ENST00000408536 78 ntBASIC0.48□□□□□ -2.33
MT-ND4P03905 SNORD99-201ENST00000408612 74 ntBASIC0.48□□□□□ -2.33
MT-ND4P03905 MIR1276-201ENST00000408707 83 ntBASIC0.48□□□□□ -2.33
MT-ND4P03905 MLLT10P1-201ENST00000418346 262 ntBASIC0.48□□□□□ -2.33
MT-ND4P03905 U7.7-201ENST00000459276 60 ntBASIC0.48□□□□□ -2.33
MT-ND4P03905 AC069439.1-201ENST00000494739 167 ntBASIC0.48□□□□□ -2.33
MT-ND4P03905 AC116353.2-201ENST00000505332 712 ntBASIC0.48□□□□□ -2.33
MT-ND4P03905 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.48□□□□□ -2.33
MT-ND4P03905 RNU6-120P-201ENST00000516077 103 ntBASIC0.48□□□□□ -2.33
MT-ND4P03905 RNA5SP121-201ENST00000516537 101 ntBASIC0.48□□□□□ -2.33
MT-ND4P03905 SNORD45.4-201ENST00000516629 73 ntBASIC0.48□□□□□ -2.33
MT-ND4P03905 AC240442.1-201ENST00000616055 283 ntBASIC0.48□□□□□ -2.33
MT-ND4P03905 AC087588.2-201ENST00000617667 426 ntBASIC0.48□□□□□ -2.33
MT-ND4P03905 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
MT-ND4P03905 RNU6-110P-201ENST00000384508 104 ntBASIC0.47□□□□□ -2.33
MT-ND4P03905 SNORD116-4-201ENST00000384733 96 ntBASIC0.47□□□□□ -2.33
MT-ND4P03905 MTND4P28-201ENST00000426217 387 ntBASIC0.47□□□□□ -2.33
MT-ND4P03905 RPL30P15-201ENST00000457129 321 ntBASIC0.47□□□□□ -2.33
MT-ND4P03905 AC098869.1-201ENST00000481627 292 ntBASIC0.47□□□□□ -2.33
MT-ND4P03905 AC105313.1-201ENST00000509121 353 ntBASIC0.47□□□□□ -2.33
MT-ND4P03905 AC011352.1-201ENST00000512300 793 ntBASIC0.47□□□□□ -2.33
MT-ND4P03905 AC006380.1-201ENST00000603598 186 ntBASIC0.47□□□□□ -2.33
MT-ND4P03905 RNU6-94P-201ENST00000607728 107 ntBASIC0.47□□□□□ -2.33
MT-ND4P03905 7SK.10-201ENST00000621414 298 ntBASIC0.47□□□□□ -2.33
MT-ND4P03905 RNA5SP432-201ENST00000362480 116 ntBASIC0.46□□□□□ -2.34
MT-ND4P03905 RNU6-1084P-201ENST00000362498 107 ntBASIC0.46□□□□□ -2.34
MT-ND4P03905 SNORD114-22-201ENST00000365423 72 ntBASIC0.46□□□□□ -2.34
MT-ND4P03905 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
MT-ND4P03905 SNORA69.1-201ENST00000390904 137 ntBASIC0.46□□□□□ -2.34
MT-ND4P03905 Y_RNA.592-201ENST00000410274 109 ntBASIC0.46□□□□□ -2.34
MT-ND4P03905 RNU2-54P-201ENST00000410299 190 ntBASIC0.46□□□□□ -2.34
MT-ND4P03905 RNU2-61P-201ENST00000411069 191 ntBASIC0.46□□□□□ -2.34
MT-ND4P03905 RNU6-1199P-201ENST00000411249 104 ntBASIC0.46□□□□□ -2.34
MT-ND4P03905 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.46□□□□□ -2.34
MT-ND4P03905 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.46□□□□□ -2.34
MT-ND4P03905 RNU4-54P-201ENST00000516428 129 ntBASIC0.46□□□□□ -2.34
MT-ND4P03905 RNU6-966P-201ENST00000516479 104 ntBASIC0.46□□□□□ -2.34
MT-ND4P03905 RNU6-307P-201ENST00000516743 106 ntBASIC0.46□□□□□ -2.34
MT-ND4P03905 AC036111.3-201ENST00000526389 112 ntBASIC0.46□□□□□ -2.34
MT-ND4P03905 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.46□□□□□ -2.34
MT-ND4P03905 AL669831.3-213ENST00000636676 183 ntBASIC0.46□□□□□ -2.34
MT-ND4P03905 SNORD50B-201ENST00000364995 70 ntBASIC0.45□□□□□ -2.34
MT-ND4P03905 RNU4-14P-201ENST00000410858 122 ntBASIC0.45□□□□□ -2.34
MT-ND4P03905 MRPS18CP6-201ENST00000423587 223 ntBASIC0.45□□□□□ -2.34
MT-ND4P03905 SNORD123-201ENST00000459473 70 ntBASIC0.45□□□□□ -2.34
MT-ND4P03905 RNU7-43P-201ENST00000516554 64 ntBASIC0.45□□□□□ -2.34
MT-ND4P03905 RNU6-1012P-201ENST00000516606 109 ntBASIC0.45□□□□□ -2.34
MT-ND4P03905 AC022616.4-201ENST00000522985 181 ntBASIC0.45□□□□□ -2.34
MT-ND4P03905 AC025627.3-201ENST00000582078 182 ntBASIC0.45□□□□□ -2.34
MT-ND4P03905 AC060780.3-201ENST00000589464 80 ntBASIC0.45□□□□□ -2.34
MT-ND4P03905 AC068700.1-201ENST00000565862 3754 ntBASIC0.44□□□□□ -2.34
MT-ND4P03905 RNU6-324P-201ENST00000363957 106 ntBASIC0.44□□□□□ -2.34
MT-ND4P03905 RNA5SP48-201ENST00000363969 126 ntBASIC0.44□□□□□ -2.34
MT-ND4P03905 snoU2-30.1-201ENST00000365012 70 ntBASIC0.44□□□□□ -2.34
MT-ND4P03905 MIR15B-201ENST00000385045 98 ntBASIC0.44□□□□□ -2.34
MT-ND4P03905 MIR1302-7-201ENST00000408841 72 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms