Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.78□□□□□ -1.96
RAPGEF3O95398 RNU6-1337P-201ENST00000516525 95 ntBASIC2.78□□□□□ -1.96
RAPGEF3O95398 MIR4438-201ENST00000585271 93 ntBASIC2.78□□□□□ -1.96
RAPGEF3O95398 AL031274.2-201ENST00000599419 203 ntBASIC2.78□□□□□ -1.96
RAPGEF3O95398 AL049779.4-201ENST00000604500 156 ntBASIC2.78□□□□□ -1.96
RAPGEF3O95398 U6.73-201ENST00000619194 103 ntBASIC2.78□□□□□ -1.96
RAPGEF3O95398 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.78□□□□□ -1.96
RAPGEF3O95398 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RAPGEF3O95398 Y_RNA.292-201ENST00000364904 97 ntBASIC2.77□□□□□ -1.97
RAPGEF3O95398 RNY4P28-201ENST00000365281 93 ntBASIC2.77□□□□□ -1.97
RAPGEF3O95398 SNORA72.4-201ENST00000384174 132 ntBASIC2.77□□□□□ -1.97
RAPGEF3O95398 MIR515-2-201ENST00000384883 83 ntBASIC2.77□□□□□ -1.97
RAPGEF3O95398 MIR515-1-201ENST00000384884 83 ntBASIC2.77□□□□□ -1.97
RAPGEF3O95398 RNU6-907P-201ENST00000390924 102 ntBASIC2.77□□□□□ -1.97
RAPGEF3O95398 RNU11-5P-201ENST00000391216 129 ntBASIC2.77□□□□□ -1.97
RAPGEF3O95398 MIR1298-201ENST00000408783 112 ntBASIC2.77□□□□□ -1.97
RAPGEF3O95398 AC004965.1-201ENST00000413033 213 ntBASIC2.77□□□□□ -1.97
RAPGEF3O95398 AL135790.2-201ENST00000437701 267 ntBASIC2.77□□□□□ -1.97
RAPGEF3O95398 RPS20P10-201ENST00000451209 253 ntBASIC2.77□□□□□ -1.97
RAPGEF3O95398 RNU6-1278P-201ENST00000516130 107 ntBASIC2.77□□□□□ -1.97
RAPGEF3O95398 AP005660.1-201ENST00000522972 293 ntBASIC2.77□□□□□ -1.97
RAPGEF3O95398 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.77□□□□□ -1.97
RAPGEF3O95398 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.77□□□□□ -1.97
RAPGEF3O95398 AC078899.2-201ENST00000595282 212 ntBASIC2.77□□□□□ -1.97
RAPGEF3O95398 AC245884.12-201ENST00000615364 59 ntBASIC2.77□□□□□ -1.97
RAPGEF3O95398 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RAPGEF3O95398 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
RAPGEF3O95398 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RAPGEF3O95398 RNU1-58P-201ENST00000362413 163 ntBASIC2.76□□□□□ -1.97
RAPGEF3O95398 RNU6-23P-201ENST00000363283 107 ntBASIC2.76□□□□□ -1.97
RAPGEF3O95398 RNU6-211P-201ENST00000384047 107 ntBASIC2.76□□□□□ -1.97
RAPGEF3O95398 RNU6-763P-201ENST00000390865 106 ntBASIC2.76□□□□□ -1.97
RAPGEF3O95398 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.76□□□□□ -1.97
RAPGEF3O95398 BTF3P11-201ENST00000426582 477 ntBASIC2.76□□□□□ -1.97
RAPGEF3O95398 Y_RNA.637-201ENST00000459424 114 ntBASIC2.76□□□□□ -1.97
RAPGEF3O95398 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.76□□□□□ -1.97
RAPGEF3O95398 AC097462.1-201ENST00000514125 324 ntBASIC2.76□□□□□ -1.97
RAPGEF3O95398 RNU6-1041P-201ENST00000516254 102 ntBASIC2.76□□□□□ -1.97
RAPGEF3O95398 MIR3169-201ENST00000578032 83 ntBASIC2.76□□□□□ -1.97
RAPGEF3O95398 SNORD14A-201ENST00000606526 91 ntBASIC2.76□□□□□ -1.97
RAPGEF3O95398 AL512598.1-201ENST00000610158 273 ntBASIC2.76□□□□□ -1.97
RAPGEF3O95398 MIR338-201ENST00000636369 67 ntBASIC2.76□□□□□ -1.97
RAPGEF3O95398 RNU1-22P-201ENST00000363334 158 ntBASIC2.75□□□□□ -1.97
RAPGEF3O95398 RNU6-899P-201ENST00000363947 107 ntBASIC2.75□□□□□ -1.97
RAPGEF3O95398 RNU1-96P-201ENST00000364163 162 ntBASIC2.75□□□□□ -1.97
RAPGEF3O95398 RNU6-117P-201ENST00000365415 107 ntBASIC2.75□□□□□ -1.97
RAPGEF3O95398 RNU6-651P-201ENST00000411040 105 ntBASIC2.75□□□□□ -1.97
RAPGEF3O95398 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.75□□□□□ -1.97
RAPGEF3O95398 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.75□□□□□ -1.97
RAPGEF3O95398 AC022202.1-201ENST00000613515 211 ntBASIC2.75□□□□□ -1.97
RAPGEF3O95398 MIR6073-201ENST00000352083 89 ntBASIC2.74□□□□□ -1.97
RAPGEF3O95398 Y_RNA.83-201ENST00000363005 113 ntBASIC2.74□□□□□ -1.97
RAPGEF3O95398 Y_RNA.199-201ENST00000364014 102 ntBASIC2.74□□□□□ -1.97
RAPGEF3O95398 Y_RNA.304-201ENST00000365011 112 ntBASIC2.74□□□□□ -1.97
RAPGEF3O95398 RNU6-417P-201ENST00000384712 107 ntBASIC2.74□□□□□ -1.97
RAPGEF3O95398 SNORA26.5-201ENST00000391215 123 ntBASIC2.74□□□□□ -1.97
RAPGEF3O95398 AL355497.1-201ENST00000406262 551 ntBASIC2.74□□□□□ -1.97
RAPGEF3O95398 CST2P1-201ENST00000425770 87 ntBASIC2.74□□□□□ -1.97
RAPGEF3O95398 AC010409.1-201ENST00000487382 476 ntBASIC2.74□□□□□ -1.97
RAPGEF3O95398 SNORD116-28-201ENST00000516123 91 ntBASIC2.74□□□□□ -1.97
RAPGEF3O95398 RNU7-172P-201ENST00000517125 64 ntBASIC2.74□□□□□ -1.97
RAPGEF3O95398 AC130289.1-201ENST00000577321 73 ntBASIC2.74□□□□□ -1.97
RAPGEF3O95398 AC007229.1-201ENST00000590455 412 ntBASIC2.74□□□□□ -1.97
RAPGEF3O95398 AC011921.3-201ENST00000605540 361 ntBASIC2.74□□□□□ -1.97
RAPGEF3O95398 AL008718.3-201ENST00000610217 321 ntBASIC2.74□□□□□ -1.97
RAPGEF3O95398 AC013791.1-201ENST00000616619 62 ntBASIC2.74□□□□□ -1.97
RAPGEF3O95398 RMST_2.1-201ENST00000617263 136 ntBASIC2.74□□□□□ -1.97
RAPGEF3O95398 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.74□□□□□ -1.97
RAPGEF3O95398 RNU6-1323P-201ENST00000384025 107 ntBASIC2.73□□□□□ -1.97
RAPGEF3O95398 Y_RNA.785-201ENST00000384290 109 ntBASIC2.73□□□□□ -1.97
RAPGEF3O95398 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.73□□□□□ -1.97
RAPGEF3O95398 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.73□□□□□ -1.97
RAPGEF3O95398 AC104435.1-201ENST00000483483 166 ntBASIC2.73□□□□□ -1.97
RAPGEF3O95398 RNU6-138P-201ENST00000515952 107 ntBASIC2.73□□□□□ -1.97
RAPGEF3O95398 RNU7-99P-201ENST00000516271 62 ntBASIC2.73□□□□□ -1.97
RAPGEF3O95398 RNU7-116P-201ENST00000516940 62 ntBASIC2.73□□□□□ -1.97
RAPGEF3O95398 AC005786.1-201ENST00000588553 154 ntBASIC2.73□□□□□ -1.97
RAPGEF3O95398 AC005972.2-201ENST00000604690 348 ntBASIC2.73□□□□□ -1.97
RAPGEF3O95398 AC004832.4-201ENST00000608952 331 ntBASIC2.73□□□□□ -1.97
RAPGEF3O95398 AL359075.3-201ENST00000613288 217 ntBASIC2.73□□□□□ -1.97
RAPGEF3O95398 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
RAPGEF3O95398 SNORD115-3-201ENST00000363100 82 ntBASIC2.72□□□□□ -1.97
RAPGEF3O95398 AL117342.1-201ENST00000404861 406 ntBASIC2.72□□□□□ -1.97
RAPGEF3O95398 Y_RNA.626-201ENST00000411288 95 ntBASIC2.72□□□□□ -1.97
RAPGEF3O95398 AC104332.1-201ENST00000440471 797 ntBASIC2.72□□□□□ -1.97
RAPGEF3O95398 AC107393.1-201ENST00000512403 346 ntBASIC2.72□□□□□ -1.97
RAPGEF3O95398 AC024995.1-201ENST00000523014 93 ntBASIC2.72□□□□□ -1.97
RAPGEF3O95398 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
RAPGEF3O95398 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
RAPGEF3O95398 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.71□□□□□ -1.98
RAPGEF3O95398 Y_RNA.262-201ENST00000364641 102 ntBASIC2.71□□□□□ -1.98
RAPGEF3O95398 RNA5SP160-201ENST00000364866 120 ntBASIC2.71□□□□□ -1.98
RAPGEF3O95398 SNORD116-13-201ENST00000384408 92 ntBASIC2.71□□□□□ -1.98
RAPGEF3O95398 EBAG9P1-201ENST00000418955 543 ntBASIC2.71□□□□□ -1.98
RAPGEF3O95398 AL162725.1-201ENST00000435405 301 ntBASIC2.71□□□□□ -1.98
RAPGEF3O95398 HSPE1P21-201ENST00000438283 308 ntBASIC2.71□□□□□ -1.98
RAPGEF3O95398 AL138752.1-201ENST00000452964 351 ntBASIC2.71□□□□□ -1.98
RAPGEF3O95398 U8.19-201ENST00000459095 133 ntBASIC2.71□□□□□ -1.98
RAPGEF3O95398 RNU7-141P-201ENST00000459304 62 ntBASIC2.71□□□□□ -1.98
RAPGEF3O95398 RNA5SP82-201ENST00000516707 92 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms