Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 RNU6-625P-201ENST00000459412 107 ntBASIC0.09□□□□□ -2.4
VAPBO95292 MIR4514-201ENST00000581410 57 ntBASIC0.09□□□□□ -2.4
VAPBO95292 AC012433.1-201ENST00000588916 398 ntBASIC0.09□□□□□ -2.4
VAPBO95292 AC023932.2-201ENST00000603176 175 ntBASIC0.09□□□□□ -2.4
VAPBO95292 AC023510.2-201ENST00000622162 746 ntBASIC0.09□□□□□ -2.4
VAPBO95292 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.09□□□□□ -2.4
VAPBO95292 MIR6863-201ENST00000636112 90 ntBASIC0.09□□□□□ -2.4
VAPBO95292 MIR3674-201ENST00000636576 68 ntBASIC0.09□□□□□ -2.4
VAPBO95292 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.09□□□□□ -2.4
VAPBO95292 MIR330-201ENST00000362196 94 ntBASIC0.08□□□□□ -2.4
VAPBO95292 RNA5SP62-201ENST00000363457 110 ntBASIC0.08□□□□□ -2.4
VAPBO95292 Y_RNA.212-201ENST00000364177 102 ntBASIC0.08□□□□□ -2.4
VAPBO95292 Y_RNA.243-201ENST00000364481 109 ntBASIC0.08□□□□□ -2.4
VAPBO95292 RNU6-396P-201ENST00000365369 105 ntBASIC0.08□□□□□ -2.4
VAPBO95292 Y_RNA.361-201ENST00000365515 120 ntBASIC0.08□□□□□ -2.4
VAPBO95292 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.08□□□□□ -2.4
VAPBO95292 UBE2V1P7-201ENST00000446395 340 ntBASIC0.08□□□□□ -2.4
VAPBO95292 SNRPGP12-201ENST00000449481 213 ntBASIC0.08□□□□□ -2.4
VAPBO95292 snoU13.21-201ENST00000459368 105 ntBASIC0.08□□□□□ -2.4
VAPBO95292 SNORA25.10-201ENST00000515926 124 ntBASIC0.08□□□□□ -2.4
VAPBO95292 SNORA25.12-201ENST00000516202 82 ntBASIC0.08□□□□□ -2.4
VAPBO95292 RNU6-977P-201ENST00000516411 103 ntBASIC0.08□□□□□ -2.4
VAPBO95292 AC022523.2-201ENST00000561045 150 ntBASIC0.08□□□□□ -2.4
VAPBO95292 MIR3612-201ENST00000579753 87 ntBASIC0.08□□□□□ -2.4
VAPBO95292 Y_RNA.253-201ENST00000364562 112 ntBASIC0.07□□□□□ -2.4
VAPBO95292 RNU6-596P-201ENST00000365395 98 ntBASIC0.07□□□□□ -2.4
VAPBO95292 Y_RNA.359-201ENST00000365498 102 ntBASIC0.07□□□□□ -2.4
VAPBO95292 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
VAPBO95292 Y_RNA.476-201ENST00000384347 108 ntBASIC0.07□□□□□ -2.4
VAPBO95292 SNORD28B-201ENST00000390993 75 ntBASIC0.07□□□□□ -2.4
VAPBO95292 SNORD83.1-201ENST00000411362 77 ntBASIC0.07□□□□□ -2.4
VAPBO95292 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.07□□□□□ -2.4
VAPBO95292 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.07□□□□□ -2.4
VAPBO95292 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.07□□□□□ -2.4
VAPBO95292 Y_RNA.670-201ENST00000516255 105 ntBASIC0.07□□□□□ -2.4
VAPBO95292 RNA5SP480-201ENST00000516840 109 ntBASIC0.07□□□□□ -2.4
VAPBO95292 Y_RNA.714-201ENST00000517065 90 ntBASIC0.07□□□□□ -2.4
VAPBO95292 AC022616.4-201ENST00000522985 181 ntBASIC0.07□□□□□ -2.4
VAPBO95292 DISC2.1-201ENST00000612827 205 ntBASIC0.07□□□□□ -2.4
VAPBO95292 RNU6-879P-201ENST00000364328 108 ntBASIC0.06□□□□□ -2.4
VAPBO95292 RNU4-67P-201ENST00000364569 141 ntBASIC0.06□□□□□ -2.4
VAPBO95292 RNU6-1042P-201ENST00000384204 107 ntBASIC0.06□□□□□ -2.4
VAPBO95292 RNU6-1337P-201ENST00000516525 95 ntBASIC0.06□□□□□ -2.4
VAPBO95292 AL355375.2-201ENST00000574825 175 ntBASIC0.06□□□□□ -2.4
VAPBO95292 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.06□□□□□ -2.4
VAPBO95292 MIR548AR-201ENST00000582191 57 ntBASIC0.06□□□□□ -2.4
VAPBO95292 AC119751.7-201ENST00000600494 245 ntBASIC0.06□□□□□ -2.4
VAPBO95292 RNU6-1310P-201ENST00000384153 107 ntBASIC0.05□□□□□ -2.4
VAPBO95292 Y_RNA.553-201ENST00000384670 102 ntBASIC0.05□□□□□ -2.4
VAPBO95292 MIR518A1-201ENST00000385068 85 ntBASIC0.05□□□□□ -2.4
VAPBO95292 RNU6-131P-201ENST00000391144 107 ntBASIC0.05□□□□□ -2.4
VAPBO95292 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.05□□□□□ -2.4
VAPBO95292 U8.19-201ENST00000459095 133 ntBASIC0.05□□□□□ -2.4
VAPBO95292 U8.22-201ENST00000459141 133 ntBASIC0.05□□□□□ -2.4
VAPBO95292 RNU6-329P-201ENST00000459618 107 ntBASIC0.05□□□□□ -2.4
VAPBO95292 Y_RNA.693-201ENST00000516641 110 ntBASIC0.05□□□□□ -2.4
VAPBO95292 AP003327.1-201ENST00000529684 127 ntBASIC0.05□□□□□ -2.4
VAPBO95292 AL512360.1-201ENST00000555346 234 ntBASIC0.05□□□□□ -2.4
VAPBO95292 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.05□□□□□ -2.4
VAPBO95292 AC121247.2-201ENST00000604776 136 ntBASIC0.05□□□□□ -2.4
VAPBO95292 RBM11P1-201ENST00000604951 799 ntBASIC0.05□□□□□ -2.4
VAPBO95292 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.04□□□□□ -2.4
VAPBO95292 RNU6-1059P-201ENST00000363752 98 ntBASIC0.04□□□□□ -2.4
VAPBO95292 RNA5SP517-201ENST00000364724 117 ntBASIC0.04□□□□□ -2.4
VAPBO95292 SNORD50B-201ENST00000364995 70 ntBASIC0.04□□□□□ -2.4
VAPBO95292 SNORD116-11-201ENST00000383882 92 ntBASIC0.04□□□□□ -2.4
VAPBO95292 RNU6-679P-201ENST00000391003 106 ntBASIC0.04□□□□□ -2.4
VAPBO95292 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.04□□□□□ -2.4
VAPBO95292 RNU7-87P-201ENST00000459343 62 ntBASIC0.04□□□□□ -2.4
VAPBO95292 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.04□□□□□ -2.4
VAPBO95292 AC010486.3-201ENST00000511602 785 ntBASIC0.04□□□□□ -2.4
VAPBO95292 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.04□□□□□ -2.4
VAPBO95292 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.04□□□□□ -2.4
VAPBO95292 MIR548AO-201ENST00000579992 96 ntBASIC0.04□□□□□ -2.4
VAPBO95292 MIR8087-201ENST00000612745 78 ntBASIC0.04□□□□□ -2.4
VAPBO95292 uc_338.16-201ENST00000621804 95 ntBASIC0.04□□□□□ -2.4
VAPBO95292 Y_RNA.48-201ENST00000362710 103 ntBASIC0.03□□□□□ -2.4
VAPBO95292 Y_RNA.148-201ENST00000363557 117 ntBASIC0.03□□□□□ -2.4
VAPBO95292 SNORD45.3-201ENST00000363836 72 ntBASIC0.03□□□□□ -2.4
VAPBO95292 Y_RNA.256-201ENST00000364594 104 ntBASIC0.03□□□□□ -2.4
VAPBO95292 RNU6-580P-201ENST00000365159 107 ntBASIC0.03□□□□□ -2.4
VAPBO95292 Y_RNA.364-201ENST00000365532 101 ntBASIC0.03□□□□□ -2.4
VAPBO95292 MTCO3P40-201ENST00000392516 676 ntBASIC0.03□□□□□ -2.4
VAPBO95292 MIR190B-201ENST00000401119 79 ntBASIC0.03□□□□□ -2.4
VAPBO95292 SNORA40.8-201ENST00000411034 126 ntBASIC0.03□□□□□ -2.4
VAPBO95292 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.03□□□□□ -2.4
VAPBO95292 AC015818.7-201ENST00000428754 109 ntBASIC0.03□□□□□ -2.4
VAPBO95292 SNRPGP10-201ENST00000432323 225 ntBASIC0.03□□□□□ -2.4
VAPBO95292 AC087499.7-201ENST00000441958 109 ntBASIC0.03□□□□□ -2.4
VAPBO95292 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.03□□□□□ -2.4
VAPBO95292 AL162413.1-201ENST00000603198 110 ntBASIC0.03□□□□□ -2.4
VAPBO95292 MIR6718-201ENST00000616153 80 ntBASIC0.03□□□□□ -2.4
VAPBO95292 AC078938.1-201ENST00000620993 318 ntBASIC0.03□□□□□ -2.4
VAPBO95292 RNY1P16-201ENST00000363063 111 ntBASIC0.02□□□□□ -2.41
VAPBO95292 SNORD115-30-201ENST00000364117 82 ntBASIC0.02□□□□□ -2.41
VAPBO95292 RNU6-842P-201ENST00000384269 107 ntBASIC0.02□□□□□ -2.41
VAPBO95292 SNORD38C-201ENST00000384381 69 ntBASIC0.02□□□□□ -2.41
VAPBO95292 MIR570-201ENST00000384917 97 ntBASIC0.02□□□□□ -2.41
VAPBO95292 DEFB108C-201ENST00000400154 252 ntBASIC0.02□□□□□ -2.41
VAPBO95292 AL358176.2-201ENST00000425769 204 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms