Protein–RNA interactions for Protein: O43583

DENR, Density-regulated protein, humanhuman

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENRO43583 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.19□□□□□ -2.38
DENRO43583 AC007742.2-201ENST00000618226 398 ntBASIC0.19□□□□□ -2.38
DENRO43583 MIR103A1-201ENST00000362165 78 ntBASIC0.18□□□□□ -2.38
DENRO43583 RNU6-874P-201ENST00000362390 105 ntBASIC0.18□□□□□ -2.38
DENRO43583 SNORD114-23-201ENST00000363536 72 ntBASIC0.18□□□□□ -2.38
DENRO43583 Y_RNA.148-201ENST00000363557 117 ntBASIC0.18□□□□□ -2.38
DENRO43583 Y_RNA.253-201ENST00000364562 112 ntBASIC0.18□□□□□ -2.38
DENRO43583 Y_RNA.490-201ENST00000384413 102 ntBASIC0.18□□□□□ -2.38
DENRO43583 MIR570-201ENST00000384917 97 ntBASIC0.18□□□□□ -2.38
DENRO43583 MIR216A-201ENST00000385063 110 ntBASIC0.18□□□□□ -2.38
DENRO43583 MIR522-201ENST00000385071 87 ntBASIC0.18□□□□□ -2.38
DENRO43583 SNORD28B-201ENST00000390993 75 ntBASIC0.18□□□□□ -2.38
DENRO43583 RNU6-177P-201ENST00000411257 104 ntBASIC0.18□□□□□ -2.38
DENRO43583 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.18□□□□□ -2.38
DENRO43583 AC015818.7-201ENST00000428754 109 ntBASIC0.18□□□□□ -2.38
DENRO43583 AC087499.7-201ENST00000441958 109 ntBASIC0.18□□□□□ -2.38
DENRO43583 AL392103.1-201ENST00000447000 198 ntBASIC0.18□□□□□ -2.38
DENRO43583 AC074133.1-201ENST00000515696 183 ntBASIC0.18□□□□□ -2.38
DENRO43583 SNORA40.9-201ENST00000515895 93 ntBASIC0.18□□□□□ -2.38
DENRO43583 SNORA25.10-201ENST00000515926 124 ntBASIC0.18□□□□□ -2.38
DENRO43583 RNU1-54P-201ENST00000517181 120 ntBASIC0.18□□□□□ -2.38
DENRO43583 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.18□□□□□ -2.38
DENRO43583 MIR4762-201ENST00000585261 75 ntBASIC0.18□□□□□ -2.38
DENRO43583 AL355073.2-201ENST00000612106 557 ntBASIC0.18□□□□□ -2.38
DENRO43583 Z99129.1-201ENST00000612510 255 ntBASIC0.18□□□□□ -2.38
DENRO43583 AC090617.10-201ENST00000624308 134 ntBASIC0.18□□□□□ -2.38
DENRO43583 MIR3974-201ENST00000637126 96 ntBASIC0.18□□□□□ -2.38
DENRO43583 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
DENRO43583 RNU6-596P-201ENST00000365395 98 ntBASIC0.17□□□□□ -2.38
DENRO43583 Y_RNA.364-201ENST00000365532 101 ntBASIC0.17□□□□□ -2.38
DENRO43583 MIR573-201ENST00000384964 99 ntBASIC0.17□□□□□ -2.38
DENRO43583 MIR520H-201ENST00000385126 88 ntBASIC0.17□□□□□ -2.38
DENRO43583 AL353997.1-201ENST00000432936 108 ntBASIC0.17□□□□□ -2.38
DENRO43583 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.17□□□□□ -2.38
DENRO43583 snoU13.21-201ENST00000459368 105 ntBASIC0.17□□□□□ -2.38
DENRO43583 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.17□□□□□ -2.38
DENRO43583 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.17□□□□□ -2.38
DENRO43583 RNU6-1088P-201ENST00000516850 104 ntBASIC0.17□□□□□ -2.38
DENRO43583 RNU11-2P-201ENST00000516898 142 ntBASIC0.17□□□□□ -2.38
DENRO43583 NBR2-204ENST00000587322 63 ntBASIC0.17□□□□□ -2.38
DENRO43583 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.17□□□□□ -2.38
DENRO43583 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.17□□□□□ -2.38
DENRO43583 RNY3P3-201ENST00000363816 102 ntBASIC0.16□□□□□ -2.38
DENRO43583 RNU6-1090P-201ENST00000364065 94 ntBASIC0.16□□□□□ -2.38
DENRO43583 Y_RNA.243-201ENST00000364481 109 ntBASIC0.16□□□□□ -2.38
DENRO43583 SNORD50B-201ENST00000364995 70 ntBASIC0.16□□□□□ -2.38
DENRO43583 Y_RNA.358-201ENST00000365491 99 ntBASIC0.16□□□□□ -2.38
DENRO43583 RNU6-318P-201ENST00000384283 103 ntBASIC0.16□□□□□ -2.38
DENRO43583 MIR520F-201ENST00000384824 87 ntBASIC0.16□□□□□ -2.38
DENRO43583 MIR15B-201ENST00000385045 98 ntBASIC0.16□□□□□ -2.38
DENRO43583 SNORD83.1-201ENST00000411362 77 ntBASIC0.16□□□□□ -2.38
DENRO43583 MIR548AR-201ENST00000582191 57 ntBASIC0.16□□□□□ -2.38
DENRO43583 PVT1_3.1-201ENST00000620853 95 ntBASIC0.16□□□□□ -2.38
DENRO43583 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.16□□□□□ -2.38
DENRO43583 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.15□□□□□ -2.39
DENRO43583 MIR410-201ENST00000362222 80 ntBASIC0.15□□□□□ -2.39
DENRO43583 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
DENRO43583 RNU6-369P-201ENST00000362515 102 ntBASIC0.15□□□□□ -2.39
DENRO43583 Y_RNA.172-201ENST00000363765 102 ntBASIC0.15□□□□□ -2.39
DENRO43583 snoU2-30.1-201ENST00000365012 70 ntBASIC0.15□□□□□ -2.39
DENRO43583 RNU6-700P-201ENST00000391043 107 ntBASIC0.15□□□□□ -2.39
DENRO43583 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.15□□□□□ -2.39
DENRO43583 SNRPGP10-201ENST00000432323 225 ntBASIC0.15□□□□□ -2.39
DENRO43583 MTND1P4-201ENST00000435196 415 ntBASIC0.15□□□□□ -2.39
DENRO43583 MTCO3P10-201ENST00000455912 772 ntBASIC0.15□□□□□ -2.39
DENRO43583 RNU6-329P-201ENST00000459618 107 ntBASIC0.15□□□□□ -2.39
DENRO43583 AC093534.1-201ENST00000504977 132 ntBASIC0.15□□□□□ -2.39
DENRO43583 AC105313.1-201ENST00000509121 353 ntBASIC0.15□□□□□ -2.39
DENRO43583 AC104695.3-201ENST00000604052 296 ntBASIC0.15□□□□□ -2.39
DENRO43583 AC005014.2-201ENST00000607795 599 ntBASIC0.15□□□□□ -2.39
DENRO43583 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.15□□□□□ -2.39
DENRO43583 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.15□□□□□ -2.39
DENRO43583 AC024614.3-201ENST00000637860 256 ntBASIC0.15□□□□□ -2.39
DENRO43583 AC090625.1-201ENST00000357130 210 ntBASIC0.14□□□□□ -2.39
DENRO43583 MIR18A-201ENST00000362310 71 ntBASIC0.14□□□□□ -2.39
DENRO43583 SNORD115-30-201ENST00000364117 82 ntBASIC0.14□□□□□ -2.39
DENRO43583 RNU6-342P-201ENST00000384521 104 ntBASIC0.14□□□□□ -2.39
DENRO43583 RNU6-679P-201ENST00000391003 106 ntBASIC0.14□□□□□ -2.39
DENRO43583 RNU6-131P-201ENST00000391144 107 ntBASIC0.14□□□□□ -2.39
DENRO43583 RNU6-977P-201ENST00000516411 103 ntBASIC0.14□□□□□ -2.39
DENRO43583 MIR5701-3-201ENST00000578890 82 ntBASIC0.14□□□□□ -2.39
DENRO43583 MIR5701-1-201ENST00000585138 82 ntBASIC0.14□□□□□ -2.39
DENRO43583 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
DENRO43583 MIR5701-2-201ENST00000615634 82 ntBASIC0.14□□□□□ -2.39
DENRO43583 AC015726.2-201ENST00000620112 122 ntBASIC0.14□□□□□ -2.39
DENRO43583 AP000770.2-201ENST00000623694 100 ntBASIC0.14□□□□□ -2.39
DENRO43583 Y_RNA.2-201ENST00000362330 96 ntBASIC0.13□□□□□ -2.39
DENRO43583 Y_RNA.368-201ENST00000365547 113 ntBASIC0.13□□□□□ -2.39
DENRO43583 MIR489-201ENST00000384923 84 ntBASIC0.13□□□□□ -2.39
DENRO43583 RNU6-613P-201ENST00000410412 108 ntBASIC0.13□□□□□ -2.39
DENRO43583 MTCO2P27-201ENST00000420740 428 ntBASIC0.13□□□□□ -2.39
DENRO43583 SUMO1P2-201ENST00000452524 304 ntBASIC0.13□□□□□ -2.39
DENRO43583 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.13□□□□□ -2.39
DENRO43583 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.13□□□□□ -2.39
DENRO43583 AC010486.3-201ENST00000511602 785 ntBASIC0.13□□□□□ -2.39
DENRO43583 RNU6-408P-201ENST00000515910 100 ntBASIC0.13□□□□□ -2.39
DENRO43583 RNU6-864P-201ENST00000516256 108 ntBASIC0.13□□□□□ -2.39
DENRO43583 MIR2115-201ENST00000516657 100 ntBASIC0.13□□□□□ -2.39
DENRO43583 MIR3612-201ENST00000579753 87 ntBASIC0.13□□□□□ -2.39
DENRO43583 RN7SL793P-201ENST00000583259 296 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms