Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 EIF1P2-201ENST00000428233 350 ntBASIC-0.05□□□□□ -2.42
SGCEO43556 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.05□□□□□ -2.42
SGCEO43556 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.05□□□□□ -2.42
SGCEO43556 AC116353.2-201ENST00000505332 712 ntBASIC-0.05□□□□□ -2.42
SGCEO43556 AC010486.3-201ENST00000511602 785 ntBASIC-0.05□□□□□ -2.42
SGCEO43556 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.05□□□□□ -2.42
SGCEO43556 AL158211.1-201ENST00000566763 763 ntBASIC-0.05□□□□□ -2.42
SGCEO43556 MIR548AO-201ENST00000579992 96 ntBASIC-0.05□□□□□ -2.42
SGCEO43556 MIR548AR-201ENST00000582191 57 ntBASIC-0.05□□□□□ -2.42
SGCEO43556 RNU6-454P-201ENST00000364292 107 ntBASIC-0.06□□□□□ -2.42
SGCEO43556 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.06□□□□□ -2.42
SGCEO43556 SNORA75-201ENST00000384158 137 ntBASIC-0.06□□□□□ -2.42
SGCEO43556 MIR489-201ENST00000384923 84 ntBASIC-0.06□□□□□ -2.42
SGCEO43556 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.06□□□□□ -2.42
SGCEO43556 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.06□□□□□ -2.42
SGCEO43556 AL139396.1-201ENST00000421137 167 ntBASIC-0.06□□□□□ -2.42
SGCEO43556 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.06□□□□□ -2.42
SGCEO43556 RNU4-77P-201ENST00000516692 156 ntBASIC-0.06□□□□□ -2.42
SGCEO43556 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.06□□□□□ -2.42
SGCEO43556 AC125232.2-201ENST00000592457 143 ntBASIC-0.06□□□□□ -2.42
SGCEO43556 AC073114.1-201ENST00000612027 490 ntBASIC-0.06□□□□□ -2.42
SGCEO43556 RNU6-1085P-201ENST00000363576 107 ntBASIC-0.07□□□□□ -2.42
SGCEO43556 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.07□□□□□ -2.42
SGCEO43556 RNU6-131P-201ENST00000391144 107 ntBASIC-0.07□□□□□ -2.42
SGCEO43556 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.07□□□□□ -2.42
SGCEO43556 AC092447.3-201ENST00000426027 686 ntBASIC-0.07□□□□□ -2.42
SGCEO43556 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.07□□□□□ -2.42
SGCEO43556 RNU6-956P-201ENST00000458868 103 ntBASIC-0.07□□□□□ -2.42
SGCEO43556 RNU6-625P-201ENST00000459412 107 ntBASIC-0.07□□□□□ -2.42
SGCEO43556 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.07□□□□□ -2.42
SGCEO43556 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.07□□□□□ -2.42
SGCEO43556 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.07□□□□□ -2.42
SGCEO43556 MIR4804-201ENST00000581683 73 ntBASIC-0.07□□□□□ -2.42
SGCEO43556 AL357075.2-201ENST00000614906 189 ntBASIC-0.07□□□□□ -2.42
SGCEO43556 AC068137.3-201ENST00000639191 341 ntBASIC-0.07□□□□□ -2.42
SGCEO43556 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.08□□□□□ -2.42
SGCEO43556 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.08□□□□□ -2.42
SGCEO43556 Y_RNA.409-201ENST00000383990 98 ntBASIC-0.08□□□□□ -2.42
SGCEO43556 RNU6-815P-201ENST00000384080 113 ntBASIC-0.08□□□□□ -2.42
SGCEO43556 Y_RNA.530-201ENST00000384587 101 ntBASIC-0.08□□□□□ -2.42
SGCEO43556 RNU2-54P-201ENST00000410299 190 ntBASIC-0.08□□□□□ -2.42
SGCEO43556 AC093534.1-201ENST00000504977 132 ntBASIC-0.08□□□□□ -2.42
SGCEO43556 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.08□□□□□ -2.42
SGCEO43556 RNU6-256P-201ENST00000516747 97 ntBASIC-0.08□□□□□ -2.42
SGCEO43556 AP000753.3-201ENST00000604083 169 ntBASIC-0.08□□□□□ -2.42
SGCEO43556 AC023510.2-201ENST00000622162 746 ntBASIC-0.08□□□□□ -2.42
SGCEO43556 MIR330-201ENST00000362196 94 ntBASIC-0.09□□□□□ -2.42
SGCEO43556 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.09□□□□□ -2.42
SGCEO43556 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.09□□□□□ -2.42
SGCEO43556 SNORD118-201ENST00000363593 134 ntBASIC-0.09□□□□□ -2.42
SGCEO43556 SNORD114-9-201ENST00000364370 72 ntBASIC-0.09□□□□□ -2.42
SGCEO43556 SNORD38C-201ENST00000384381 69 ntBASIC-0.09□□□□□ -2.42
SGCEO43556 MIR613-201ENST00000385248 95 ntBASIC-0.09□□□□□ -2.42
SGCEO43556 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
SGCEO43556 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.09□□□□□ -2.42
SGCEO43556 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.09□□□□□ -2.42
SGCEO43556 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.09□□□□□ -2.42
SGCEO43556 RNA5SP227-201ENST00000516184 113 ntBASIC-0.09□□□□□ -2.42
SGCEO43556 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.09□□□□□ -2.42
SGCEO43556 MIR1273G-201ENST00000577677 100 ntBASIC-0.09□□□□□ -2.42
SGCEO43556 RNA5SP214-201ENST00000363378 118 ntBASIC-0.1□□□□□ -2.43
SGCEO43556 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.1□□□□□ -2.43
SGCEO43556 SNORD50B-201ENST00000364995 70 ntBASIC-0.1□□□□□ -2.43
SGCEO43556 RNU6-302P-201ENST00000365249 107 ntBASIC-0.1□□□□□ -2.43
SGCEO43556 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.1□□□□□ -2.43
SGCEO43556 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.1□□□□□ -2.43
SGCEO43556 SNORD28B-201ENST00000390993 75 ntBASIC-0.1□□□□□ -2.43
SGCEO43556 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.1□□□□□ -2.43
SGCEO43556 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.1□□□□□ -2.43
SGCEO43556 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.1□□□□□ -2.43
SGCEO43556 RNU6-329P-201ENST00000459618 107 ntBASIC-0.1□□□□□ -2.43
SGCEO43556 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.1□□□□□ -2.43
SGCEO43556 RNU6-415P-201ENST00000516252 97 ntBASIC-0.1□□□□□ -2.43
SGCEO43556 RNA5SP94-201ENST00000516917 108 ntBASIC-0.1□□□□□ -2.43
SGCEO43556 AC112693.2-201ENST00000556538 232 ntBASIC-0.1□□□□□ -2.43
SGCEO43556 MIR4771-2-201ENST00000577758 74 ntBASIC-0.1□□□□□ -2.43
SGCEO43556 MIR4771-1-201ENST00000582617 74 ntBASIC-0.1□□□□□ -2.43
SGCEO43556 MIR4290-201ENST00000583807 95 ntBASIC-0.1□□□□□ -2.43
SGCEO43556 DLEU2_1.1-201ENST00000612089 120 ntBASIC-0.1□□□□□ -2.43
SGCEO43556 DLEU2_1.2-201ENST00000614667 120 ntBASIC-0.1□□□□□ -2.43
SGCEO43556 AC240442.1-201ENST00000616055 283 ntBASIC-0.1□□□□□ -2.43
SGCEO43556 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.1□□□□□ -2.43
SGCEO43556 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.1□□□□□ -2.43
SGCEO43556 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.11□□□□□ -2.43
SGCEO43556 RNU6-879P-201ENST00000364328 108 ntBASIC-0.11□□□□□ -2.43
SGCEO43556 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.11□□□□□ -2.43
SGCEO43556 SEPT14P3-201ENST00000439401 183 ntBASIC-0.11□□□□□ -2.43
SGCEO43556 MTND4LP16-201ENST00000440828 295 ntBASIC-0.11□□□□□ -2.43
SGCEO43556 AL732372.2-207ENST00000445840 183 ntBASIC-0.11□□□□□ -2.43
SGCEO43556 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.11□□□□□ -2.43
SGCEO43556 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.11□□□□□ -2.43
SGCEO43556 SEPT14P2-201ENST00000453405 183 ntBASIC-0.11□□□□□ -2.43
SGCEO43556 RNU7-56P-201ENST00000458744 62 ntBASIC-0.11□□□□□ -2.43
SGCEO43556 SEPT14P4-201ENST00000513445 186 ntBASIC-0.11□□□□□ -2.43
SGCEO43556 FO082796.1-201ENST00000523795 183 ntBASIC-0.11□□□□□ -2.43
SGCEO43556 MIR4676-201ENST00000583078 72 ntBASIC-0.11□□□□□ -2.43
SGCEO43556 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.12□□□□□ -2.43
SGCEO43556 SNORA51.10-201ENST00000384418 136 ntBASIC-0.12□□□□□ -2.43
SGCEO43556 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.12□□□□□ -2.43
SGCEO43556 RNA5SP63-201ENST00000391225 112 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms