Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 Y_RNA.621-201ENST00000411065 96 ntBASIC0.5□□□□□ -2.33
CLOCKO15516 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.5□□□□□ -2.33
CLOCKO15516 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.5□□□□□ -2.33
CLOCKO15516 AC098934.3-201ENST00000430450 190 ntBASIC0.5□□□□□ -2.33
CLOCKO15516 SNORA40.9-201ENST00000515895 93 ntBASIC0.5□□□□□ -2.33
CLOCKO15516 RNU7-41P-201ENST00000515917 61 ntBASIC0.5□□□□□ -2.33
CLOCKO15516 7SK.10-201ENST00000621414 298 ntBASIC0.5□□□□□ -2.33
CLOCKO15516 AC100810.6-201ENST00000638068 285 ntBASIC0.5□□□□□ -2.33
CLOCKO15516 AL442644.1-201ENST00000454390 3105 ntBASIC0.49□□□□□ -2.33
CLOCKO15516 RNU6-874P-201ENST00000362390 105 ntBASIC0.49□□□□□ -2.33
CLOCKO15516 RNY4P14-201ENST00000363656 96 ntBASIC0.49□□□□□ -2.33
CLOCKO15516 Y_RNA.205-201ENST00000364128 113 ntBASIC0.49□□□□□ -2.33
CLOCKO15516 Y_RNA.301-201ENST00000364990 103 ntBASIC0.49□□□□□ -2.33
CLOCKO15516 SNORD14.1-201ENST00000365609 90 ntBASIC0.49□□□□□ -2.33
CLOCKO15516 AC117470.1-201ENST00000381974 330 ntBASIC0.49□□□□□ -2.33
CLOCKO15516 MIR516B2-201ENST00000385190 85 ntBASIC0.49□□□□□ -2.33
CLOCKO15516 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
CLOCKO15516 AC018659.1-201ENST00000551083 169 ntBASIC0.49□□□□□ -2.33
CLOCKO15516 MIR4790-201ENST00000577799 79 ntBASIC0.49□□□□□ -2.33
CLOCKO15516 AC018462.2-201ENST00000605375 395 ntBASIC0.49□□□□□ -2.33
CLOCKO15516 AL136317.1-201ENST00000612653 226 ntBASIC0.49□□□□□ -2.33
CLOCKO15516 AC007742.2-201ENST00000618226 398 ntBASIC0.49□□□□□ -2.33
CLOCKO15516 Y_RNA.157-201ENST00000363638 102 ntBASIC0.48□□□□□ -2.33
CLOCKO15516 Y_RNA.361-201ENST00000365515 120 ntBASIC0.48□□□□□ -2.33
CLOCKO15516 RNU6-318P-201ENST00000384283 103 ntBASIC0.48□□□□□ -2.33
CLOCKO15516 RNU6-1297P-201ENST00000384415 104 ntBASIC0.48□□□□□ -2.33
CLOCKO15516 MIR15B-201ENST00000385045 98 ntBASIC0.48□□□□□ -2.33
CLOCKO15516 RNA5SP118-201ENST00000410385 109 ntBASIC0.48□□□□□ -2.33
CLOCKO15516 AC067940.1-201ENST00000458411 300 ntBASIC0.48□□□□□ -2.33
CLOCKO15516 U8.22-201ENST00000459141 133 ntBASIC0.48□□□□□ -2.33
CLOCKO15516 RN7SKP164-201ENST00000516138 266 ntBASIC0.48□□□□□ -2.33
CLOCKO15516 MIR4764-201ENST00000580680 88 ntBASIC0.48□□□□□ -2.33
CLOCKO15516 AC009229.3-201ENST00000608056 282 ntBASIC0.48□□□□□ -2.33
CLOCKO15516 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CLOCKO15516 Y_RNA.9-201ENST00000362354 101 ntBASIC0.47□□□□□ -2.33
CLOCKO15516 Y_RNA.41-201ENST00000362646 102 ntBASIC0.47□□□□□ -2.33
CLOCKO15516 SNORD114-23-201ENST00000363536 72 ntBASIC0.47□□□□□ -2.33
CLOCKO15516 RNA5SP48-201ENST00000363969 126 ntBASIC0.47□□□□□ -2.33
CLOCKO15516 Y_RNA.358-201ENST00000365491 99 ntBASIC0.47□□□□□ -2.33
CLOCKO15516 Y_RNA.517-201ENST00000384551 106 ntBASIC0.47□□□□□ -2.33
CLOCKO15516 RNU6-1067P-201ENST00000384752 107 ntBASIC0.47□□□□□ -2.33
CLOCKO15516 MIR193B-201ENST00000384907 83 ntBASIC0.47□□□□□ -2.33
CLOCKO15516 SNORD111-201ENST00000408139 94 ntBASIC0.47□□□□□ -2.33
CLOCKO15516 AC074085.1-201ENST00000413598 418 ntBASIC0.47□□□□□ -2.33
CLOCKO15516 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.47□□□□□ -2.33
CLOCKO15516 AC026782.1-201ENST00000512952 449 ntBASIC0.47□□□□□ -2.33
CLOCKO15516 RNU6-1337P-201ENST00000516525 95 ntBASIC0.47□□□□□ -2.33
CLOCKO15516 RNU7-43P-201ENST00000516554 64 ntBASIC0.47□□□□□ -2.33
CLOCKO15516 RNU11-2P-201ENST00000516898 142 ntBASIC0.47□□□□□ -2.33
CLOCKO15516 AC036111.3-201ENST00000526389 112 ntBASIC0.47□□□□□ -2.33
CLOCKO15516 AC024909.2-201ENST00000553035 286 ntBASIC0.47□□□□□ -2.33
CLOCKO15516 AC103591.3-201ENST00000608684 209 ntBASIC0.47□□□□□ -2.33
CLOCKO15516 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.47□□□□□ -2.33
CLOCKO15516 Y_RNA.194-201ENST00000363985 102 ntBASIC0.46□□□□□ -2.34
CLOCKO15516 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CLOCKO15516 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.46□□□□□ -2.34
CLOCKO15516 MTND5P5-201ENST00000503764 376 ntBASIC0.46□□□□□ -2.34
CLOCKO15516 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.46□□□□□ -2.34
CLOCKO15516 SNORA18.7-201ENST00000516910 131 ntBASIC0.46□□□□□ -2.34
CLOCKO15516 MIR4711-201ENST00000578274 70 ntBASIC0.46□□□□□ -2.34
CLOCKO15516 Y_RNA.2-201ENST00000362330 96 ntBASIC0.45□□□□□ -2.34
CLOCKO15516 Y_RNA.89-201ENST00000363031 102 ntBASIC0.45□□□□□ -2.34
CLOCKO15516 RNA5SP499-201ENST00000363982 119 ntBASIC0.45□□□□□ -2.34
CLOCKO15516 SNORD115-30-201ENST00000364117 82 ntBASIC0.45□□□□□ -2.34
CLOCKO15516 RNU6-945P-201ENST00000383947 107 ntBASIC0.45□□□□□ -2.34
CLOCKO15516 RNU1-119P-201ENST00000391122 165 ntBASIC0.45□□□□□ -2.34
CLOCKO15516 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.45□□□□□ -2.34
CLOCKO15516 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.45□□□□□ -2.34
CLOCKO15516 RNU2-12P-201ENST00000517216 168 ntBASIC0.45□□□□□ -2.34
CLOCKO15516 AL512605.2-201ENST00000592972 256 ntBASIC0.45□□□□□ -2.34
CLOCKO15516 RNU6-94P-201ENST00000607728 107 ntBASIC0.45□□□□□ -2.34
CLOCKO15516 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
CLOCKO15516 RNU6-593P-201ENST00000364716 112 ntBASIC0.44□□□□□ -2.34
CLOCKO15516 SNORD116-2-201ENST00000384274 95 ntBASIC0.44□□□□□ -2.34
CLOCKO15516 Y_RNA.473-201ENST00000384333 102 ntBASIC0.44□□□□□ -2.34
CLOCKO15516 SNORD116-6-201ENST00000384711 96 ntBASIC0.44□□□□□ -2.34
CLOCKO15516 MIR522-201ENST00000385071 87 ntBASIC0.44□□□□□ -2.34
CLOCKO15516 RNU6-1050P-201ENST00000410388 107 ntBASIC0.44□□□□□ -2.34
CLOCKO15516 SNORD12B-201ENST00000410433 91 ntBASIC0.44□□□□□ -2.34
CLOCKO15516 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
CLOCKO15516 AC092423.1-201ENST00000430165 186 ntBASIC0.44□□□□□ -2.34
CLOCKO15516 AC092628.1-201ENST00000436250 252 ntBASIC0.44□□□□□ -2.34
CLOCKO15516 MTND2P22-201ENST00000444325 1033 ntBASIC0.44□□□□□ -2.34
CLOCKO15516 RNU6-496P-201ENST00000516145 99 ntBASIC0.44□□□□□ -2.34
CLOCKO15516 Y_RNA.682-201ENST00000516457 100 ntBASIC0.44□□□□□ -2.34
CLOCKO15516 SNORD45.4-201ENST00000516629 73 ntBASIC0.44□□□□□ -2.34
CLOCKO15516 RNU6-1016P-201ENST00000516689 94 ntBASIC0.44□□□□□ -2.34
CLOCKO15516 AC022616.4-201ENST00000522985 181 ntBASIC0.44□□□□□ -2.34
CLOCKO15516 AF235103.2-201ENST00000525753 346 ntBASIC0.44□□□□□ -2.34
CLOCKO15516 AC005730.3-201ENST00000583067 366 ntBASIC0.44□□□□□ -2.34
CLOCKO15516 Z83818.1-201ENST00000603584 150 ntBASIC0.44□□□□□ -2.34
CLOCKO15516 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.44□□□□□ -2.34
CLOCKO15516 RNU6-1084P-201ENST00000362498 107 ntBASIC0.43□□□□□ -2.34
CLOCKO15516 Y_RNA.573-201ENST00000384763 105 ntBASIC0.43□□□□□ -2.34
CLOCKO15516 RNA5SP193-201ENST00000410353 107 ntBASIC0.43□□□□□ -2.34
CLOCKO15516 Y_RNA.594-201ENST00000410373 140 ntBASIC0.43□□□□□ -2.34
CLOCKO15516 RNU6-994P-201ENST00000410507 111 ntBASIC0.43□□□□□ -2.34
CLOCKO15516 AC244098.3-201ENST00000424803 96 ntBASIC0.43□□□□□ -2.34
CLOCKO15516 AL353997.1-201ENST00000432936 108 ntBASIC0.43□□□□□ -2.34
CLOCKO15516 RNU4-49P-201ENST00000516080 140 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms