Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 RNU6-254P-201ENST00000363377 107 ntBASIC-0.17□□□□□ -2.44
TRAV1-1A0A0B4J248 SNORA36.1-201ENST00000363424 132 ntBASIC-0.17□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU6-454P-201ENST00000364292 107 ntBASIC-0.17□□□□□ -2.44
TRAV1-1A0A0B4J248 SNORA32.1-201ENST00000364514 115 ntBASIC-0.17□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU6-790P-201ENST00000384479 105 ntBASIC-0.17□□□□□ -2.44
TRAV1-1A0A0B4J248 MIR329-1-201ENST00000385028 80 ntBASIC-0.17□□□□□ -2.44
TRAV1-1A0A0B4J248 MIR514A2-201ENST00000385131 88 ntBASIC-0.17□□□□□ -2.44
TRAV1-1A0A0B4J248 MIR514A3-201ENST00000385132 88 ntBASIC-0.17□□□□□ -2.44
TRAV1-1A0A0B4J248 MT-TH-201ENST00000387441 69 ntBASIC-0.17□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU6-205P-201ENST00000390858 107 ntBASIC-0.17□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.17□□□□□ -2.44
TRAV1-1A0A0B4J248 MTND1P11-201ENST00000456661 876 ntBASIC-0.17□□□□□ -2.44
TRAV1-1A0A0B4J248 MTND3P3-201ENST00000505004 126 ntBASIC-0.17□□□□□ -2.44
TRAV1-1A0A0B4J248 AC010486.3-201ENST00000511602 785 ntBASIC-0.17□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU7-175P-201ENST00000515915 61 ntBASIC-0.17□□□□□ -2.44
TRAV1-1A0A0B4J248 RNA5SP401-201ENST00000515920 127 ntBASIC-0.17□□□□□ -2.44
TRAV1-1A0A0B4J248 SNORA25.10-201ENST00000515926 124 ntBASIC-0.17□□□□□ -2.44
TRAV1-1A0A0B4J248 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.17□□□□□ -2.44
TRAV1-1A0A0B4J248 Pinc.1-201ENST00000616452 154 ntBASIC-0.17□□□□□ -2.44
TRAV1-1A0A0B4J248 AC067863.3-201ENST00000624172 122 ntBASIC-0.17□□□□□ -2.44
TRAV1-1A0A0B4J248 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.17□□□□□ -2.44
TRAV1-1A0A0B4J248 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.18□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU6-522P-201ENST00000364497 107 ntBASIC-0.18□□□□□ -2.44
TRAV1-1A0A0B4J248 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.18□□□□□ -2.44
TRAV1-1A0A0B4J248 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.18□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.18□□□□□ -2.44
TRAV1-1A0A0B4J248 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.18□□□□□ -2.44
TRAV1-1A0A0B4J248 MIR643-201ENST00000385267 97 ntBASIC-0.18□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU2-54P-201ENST00000410299 190 ntBASIC-0.18□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU2-59P-201ENST00000410482 191 ntBASIC-0.18□□□□□ -2.44
TRAV1-1A0A0B4J248 HMGN2P32-201ENST00000444648 269 ntBASIC-0.18□□□□□ -2.44
TRAV1-1A0A0B4J248 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.18□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU6-261P-201ENST00000459506 102 ntBASIC-0.18□□□□□ -2.44
TRAV1-1A0A0B4J248 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.18□□□□□ -2.44
TRAV1-1A0A0B4J248 AC090897.1-201ENST00000580909 226 ntBASIC-0.18□□□□□ -2.44
TRAV1-1A0A0B4J248 AC245884.10-201ENST00000597355 337 ntBASIC-0.18□□□□□ -2.44
TRAV1-1A0A0B4J248 Z94722.1-201ENST00000604328 474 ntBASIC-0.18□□□□□ -2.44
TRAV1-1A0A0B4J248 uc_338.6-201ENST00000613544 171 ntBASIC-0.18□□□□□ -2.44
TRAV1-1A0A0B4J248 AC007494.3-201ENST00000624660 743 ntBASIC-0.18□□□□□ -2.44
TRAV1-1A0A0B4J248 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.19□□□□□ -2.44
TRAV1-1A0A0B4J248 SNORD50B-201ENST00000364995 70 ntBASIC-0.19□□□□□ -2.44
TRAV1-1A0A0B4J248 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.19□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU6-95P-201ENST00000384697 107 ntBASIC-0.19□□□□□ -2.44
TRAV1-1A0A0B4J248 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.19□□□□□ -2.44
TRAV1-1A0A0B4J248 MIR593-201ENST00000384856 100 ntBASIC-0.19□□□□□ -2.44
TRAV1-1A0A0B4J248 MIR145-201ENST00000384967 88 ntBASIC-0.19□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU6-700P-201ENST00000391043 107 ntBASIC-0.19□□□□□ -2.44
TRAV1-1A0A0B4J248 RNA5SP496-201ENST00000391240 109 ntBASIC-0.19□□□□□ -2.44
TRAV1-1A0A0B4J248 SNORA26.8-201ENST00000391306 124 ntBASIC-0.19□□□□□ -2.44
TRAV1-1A0A0B4J248 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.19□□□□□ -2.44
TRAV1-1A0A0B4J248 AL365203.2-201ENST00000423444 196 ntBASIC-0.19□□□□□ -2.44
TRAV1-1A0A0B4J248 BTF3P11-201ENST00000426582 477 ntBASIC-0.19□□□□□ -2.44
TRAV1-1A0A0B4J248 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.19□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU6-329P-201ENST00000459618 107 ntBASIC-0.19□□□□□ -2.44
TRAV1-1A0A0B4J248 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.19□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU6-830P-201ENST00000516353 107 ntBASIC-0.19□□□□□ -2.44
TRAV1-1A0A0B4J248 AC093023.1-201ENST00000547375 507 ntBASIC-0.19□□□□□ -2.44
TRAV1-1A0A0B4J248 AL357075.2-201ENST00000614906 189 ntBASIC-0.19□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.2□□□□□ -2.44
TRAV1-1A0A0B4J248 SNORD114-31-201ENST00000363219 75 ntBASIC-0.2□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.2□□□□□ -2.44
TRAV1-1A0A0B4J248 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.2□□□□□ -2.44
TRAV1-1A0A0B4J248 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.2□□□□□ -2.44
TRAV1-1A0A0B4J248 SNORA72.3-201ENST00000365074 132 ntBASIC-0.2□□□□□ -2.44
TRAV1-1A0A0B4J248 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.2□□□□□ -2.44
TRAV1-1A0A0B4J248 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.2□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU6-929P-201ENST00000384429 107 ntBASIC-0.2□□□□□ -2.44
TRAV1-1A0A0B4J248 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.2□□□□□ -2.44
TRAV1-1A0A0B4J248 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.2□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU6-127P-201ENST00000390897 107 ntBASIC-0.2□□□□□ -2.44
TRAV1-1A0A0B4J248 MIR548H2-201ENST00000408874 88 ntBASIC-0.2□□□□□ -2.44
TRAV1-1A0A0B4J248 MTND3P23-201ENST00000431980 347 ntBASIC-0.2□□□□□ -2.44
TRAV1-1A0A0B4J248 MTND3P16-201ENST00000452205 344 ntBASIC-0.2□□□□□ -2.44
TRAV1-1A0A0B4J248 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.2□□□□□ -2.44
TRAV1-1A0A0B4J248 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.2□□□□□ -2.44
TRAV1-1A0A0B4J248 IGLVI-20-201ENST00000519296 130 ntBASIC-0.2□□□□□ -2.44
TRAV1-1A0A0B4J248 AC090617.3-201ENST00000573670 475 ntBASIC-0.2□□□□□ -2.44
TRAV1-1A0A0B4J248 AC099654.12-201ENST00000639868 649 ntBASIC-0.2□□□□□ -2.44
TRAV1-1A0A0B4J248 Y_RNA.295-201ENST00000364918 102 ntBASIC-0.21□□□□□ -2.44
TRAV1-1A0A0B4J248 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.21□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU6-756P-201ENST00000383997 107 ntBASIC-0.21□□□□□ -2.44
TRAV1-1A0A0B4J248 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.21□□□□□ -2.44
TRAV1-1A0A0B4J248 SNORD37.1-201ENST00000390968 65 ntBASIC-0.21□□□□□ -2.44
TRAV1-1A0A0B4J248 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.21□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.21□□□□□ -2.44
TRAV1-1A0A0B4J248 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.21□□□□□ -2.44
TRAV1-1A0A0B4J248 EIF1P2-201ENST00000428233 350 ntBASIC-0.21□□□□□ -2.44
TRAV1-1A0A0B4J248 SNRPGP10-201ENST00000432323 225 ntBASIC-0.21□□□□□ -2.44
TRAV1-1A0A0B4J248 AC069271.1-201ENST00000445577 156 ntBASIC-0.21□□□□□ -2.44
TRAV1-1A0A0B4J248 UQCRBP2-201ENST00000447827 297 ntBASIC-0.21□□□□□ -2.44
TRAV1-1A0A0B4J248 MTND1P27-201ENST00000451117 902 ntBASIC-0.21□□□□□ -2.44
TRAV1-1A0A0B4J248 AC083798.1-201ENST00000472671 131 ntBASIC-0.21□□□□□ -2.44
TRAV1-1A0A0B4J248 ACA59.1-201ENST00000515966 143 ntBASIC-0.21□□□□□ -2.44
TRAV1-1A0A0B4J248 AC022616.4-201ENST00000522985 181 ntBASIC-0.21□□□□□ -2.44
TRAV1-1A0A0B4J248 AC018448.1-201ENST00000552843 316 ntBASIC-0.21□□□□□ -2.44
TRAV1-1A0A0B4J248 AC133485.4-201ENST00000561835 220 ntBASIC-0.21□□□□□ -2.44
TRAV1-1A0A0B4J248 MIR4528-201ENST00000577763 90 ntBASIC-0.21□□□□□ -2.44
TRAV1-1A0A0B4J248 MIR4264-201ENST00000583520 66 ntBASIC-0.21□□□□□ -2.44
TRAV1-1A0A0B4J248 AC125232.2-201ENST00000592457 143 ntBASIC-0.21□□□□□ -2.44
TRAV1-1A0A0B4J248 AP001330.5-201ENST00000607176 411 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms