Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 Y_RNA.172-201ENST00000363765 102 ntBASIC1.89□□□□□ -2.11
CLDN16Q9Y5I7 RNA5SP160-201ENST00000364866 120 ntBASIC1.89□□□□□ -2.11
CLDN16Q9Y5I7 RNA5SP37-201ENST00000365420 130 ntBASIC1.89□□□□□ -2.11
CLDN16Q9Y5I7 RNU6-574P-201ENST00000384265 107 ntBASIC1.89□□□□□ -2.11
CLDN16Q9Y5I7 SNORD116-13-201ENST00000384408 92 ntBASIC1.89□□□□□ -2.11
CLDN16Q9Y5I7 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.89□□□□□ -2.11
CLDN16Q9Y5I7 AC245047.4-201ENST00000433189 144 ntBASIC1.89□□□□□ -2.11
CLDN16Q9Y5I7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.89□□□□□ -2.11
CLDN16Q9Y5I7 RNU7-94P-201ENST00000459576 63 ntBASIC1.89□□□□□ -2.11
CLDN16Q9Y5I7 UBL5P3-201ENST00000475112 231 ntBASIC1.89□□□□□ -2.11
CLDN16Q9Y5I7 SERF1AP1-201ENST00000514575 187 ntBASIC1.89□□□□□ -2.11
CLDN16Q9Y5I7 RNU6-191P-201ENST00000516295 94 ntBASIC1.89□□□□□ -2.11
CLDN16Q9Y5I7 RNU7-128P-201ENST00000517247 62 ntBASIC1.89□□□□□ -2.11
CLDN16Q9Y5I7 MIR4503-201ENST00000582187 83 ntBASIC1.89□□□□□ -2.11
CLDN16Q9Y5I7 MIR4713-201ENST00000582691 75 ntBASIC1.89□□□□□ -2.11
CLDN16Q9Y5I7 MIR4448-201ENST00000584360 86 ntBASIC1.89□□□□□ -2.11
CLDN16Q9Y5I7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CLDN16Q9Y5I7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
CLDN16Q9Y5I7 Y_RNA.267-201ENST00000364679 109 ntBASIC1.88□□□□□ -2.11
CLDN16Q9Y5I7 RNU6-463P-201ENST00000384340 107 ntBASIC1.88□□□□□ -2.11
CLDN16Q9Y5I7 RNA5SP109-201ENST00000391010 116 ntBASIC1.88□□□□□ -2.11
CLDN16Q9Y5I7 RPS20P10-201ENST00000451209 253 ntBASIC1.88□□□□□ -2.11
CLDN16Q9Y5I7 AL021397.1-201ENST00000451806 248 ntBASIC1.88□□□□□ -2.11
CLDN16Q9Y5I7 AC233266.1-201ENST00000454518 96 ntBASIC1.88□□□□□ -2.11
CLDN16Q9Y5I7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.88□□□□□ -2.11
CLDN16Q9Y5I7 AC242852.1-201ENST00000612151 96 ntBASIC1.88□□□□□ -2.11
CLDN16Q9Y5I7 AP001282.2-201ENST00000616149 309 ntBASIC1.88□□□□□ -2.11
CLDN16Q9Y5I7 AC244015.1-201ENST00000622301 99 ntBASIC1.88□□□□□ -2.11
CLDN16Q9Y5I7 MIR6079-201ENST00000635807 62 ntBASIC1.88□□□□□ -2.11
CLDN16Q9Y5I7 AC068647.2-201ENST00000637380 353 ntBASIC1.88□□□□□ -2.11
CLDN16Q9Y5I7 AC018630.2-201ENST00000534866 2403 ntBASIC1.88□□□□□ -2.11
CLDN16Q9Y5I7 RNU6-112P-201ENST00000363599 104 ntBASIC1.87□□□□□ -2.11
CLDN16Q9Y5I7 RNU6-117P-201ENST00000365415 107 ntBASIC1.87□□□□□ -2.11
CLDN16Q9Y5I7 Y_RNA.368-201ENST00000365547 113 ntBASIC1.87□□□□□ -2.11
CLDN16Q9Y5I7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CLDN16Q9Y5I7 Y_RNA.456-201ENST00000384232 111 ntBASIC1.87□□□□□ -2.11
CLDN16Q9Y5I7 MIR1261-201ENST00000408659 82 ntBASIC1.87□□□□□ -2.11
CLDN16Q9Y5I7 RNA5SP100-201ENST00000410903 110 ntBASIC1.87□□□□□ -2.11
CLDN16Q9Y5I7 RNA5SP59-201ENST00000410922 110 ntBASIC1.87□□□□□ -2.11
CLDN16Q9Y5I7 Y_RNA.621-201ENST00000411065 96 ntBASIC1.87□□□□□ -2.11
CLDN16Q9Y5I7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.87□□□□□ -2.11
CLDN16Q9Y5I7 snoU13.15-201ENST00000459407 104 ntBASIC1.87□□□□□ -2.11
CLDN16Q9Y5I7 AC091021.1-201ENST00000468051 388 ntBASIC1.87□□□□□ -2.11
CLDN16Q9Y5I7 RPS26P45-201ENST00000471748 340 ntBASIC1.87□□□□□ -2.11
CLDN16Q9Y5I7 AC091959.1-201ENST00000495857 238 ntBASIC1.87□□□□□ -2.11
CLDN16Q9Y5I7 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.87□□□□□ -2.11
CLDN16Q9Y5I7 SNRPGP19-201ENST00000603826 189 ntBASIC1.87□□□□□ -2.11
CLDN16Q9Y5I7 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.87□□□□□ -2.11
CLDN16Q9Y5I7 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.87□□□□□ -2.11
CLDN16Q9Y5I7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CLDN16Q9Y5I7 RNU6-702P-201ENST00000364982 107 ntBASIC1.86□□□□□ -2.11
CLDN16Q9Y5I7 RNU6-472P-201ENST00000384299 107 ntBASIC1.86□□□□□ -2.11
CLDN16Q9Y5I7 AC245047.3-201ENST00000429428 127 ntBASIC1.86□□□□□ -2.11
CLDN16Q9Y5I7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.86□□□□□ -2.11
CLDN16Q9Y5I7 AL162725.1-201ENST00000435405 301 ntBASIC1.86□□□□□ -2.11
CLDN16Q9Y5I7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.86□□□□□ -2.11
CLDN16Q9Y5I7 AC025033.1-201ENST00000463883 194 ntBASIC1.86□□□□□ -2.11
CLDN16Q9Y5I7 RNU6-1096P-201ENST00000517089 102 ntBASIC1.86□□□□□ -2.11
CLDN16Q9Y5I7 AC015720.1-201ENST00000565251 277 ntBASIC1.86□□□□□ -2.11
CLDN16Q9Y5I7 MIR3149-201ENST00000584629 83 ntBASIC1.86□□□□□ -2.11
CLDN16Q9Y5I7 AC005972.2-201ENST00000604690 348 ntBASIC1.86□□□□□ -2.11
CLDN16Q9Y5I7 AC004832.4-201ENST00000608952 331 ntBASIC1.86□□□□□ -2.11
CLDN16Q9Y5I7 AP000553.5-201ENST00000641933 54 ntBASIC1.86□□□□□ -2.11
CLDN16Q9Y5I7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CLDN16Q9Y5I7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.86□□□□□ -2.11
CLDN16Q9Y5I7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CLDN16Q9Y5I7 Y_RNA.310-201ENST00000365063 113 ntBASIC1.85□□□□□ -2.11
CLDN16Q9Y5I7 RNU6-662P-201ENST00000384253 104 ntBASIC1.85□□□□□ -2.11
CLDN16Q9Y5I7 MIR562-201ENST00000384894 95 ntBASIC1.85□□□□□ -2.11
CLDN16Q9Y5I7 MIR520G-201ENST00000385064 90 ntBASIC1.85□□□□□ -2.11
CLDN16Q9Y5I7 RNA5SP338-201ENST00000410495 85 ntBASIC1.85□□□□□ -2.11
CLDN16Q9Y5I7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.85□□□□□ -2.11
CLDN16Q9Y5I7 RPL36AP21-201ENST00000490372 323 ntBASIC1.85□□□□□ -2.11
CLDN16Q9Y5I7 RPL23AP63-201ENST00000498752 471 ntBASIC1.85□□□□□ -2.11
CLDN16Q9Y5I7 RNU6-1291P-201ENST00000516591 104 ntBASIC1.85□□□□□ -2.11
CLDN16Q9Y5I7 AC136628.3-201ENST00000521868 290 ntBASIC1.85□□□□□ -2.11
CLDN16Q9Y5I7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.85□□□□□ -2.11
CLDN16Q9Y5I7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.85□□□□□ -2.11
CLDN16Q9Y5I7 Y_RNA.54-201ENST00000362766 105 ntBASIC1.84□□□□□ -2.11
CLDN16Q9Y5I7 Y_RNA.452-201ENST00000384202 108 ntBASIC1.84□□□□□ -2.11
CLDN16Q9Y5I7 RNU2-38P-201ENST00000410856 79 ntBASIC1.84□□□□□ -2.11
CLDN16Q9Y5I7 COX6CP10-201ENST00000416832 224 ntBASIC1.84□□□□□ -2.11
CLDN16Q9Y5I7 HSPE1P9-201ENST00000440046 311 ntBASIC1.84□□□□□ -2.11
CLDN16Q9Y5I7 AL606517.2-201ENST00000442855 241 ntBASIC1.84□□□□□ -2.11
CLDN16Q9Y5I7 SNORD127-201ENST00000458892 86 ntBASIC1.84□□□□□ -2.11
CLDN16Q9Y5I7 RNU6-717P-201ENST00000459076 104 ntBASIC1.84□□□□□ -2.11
CLDN16Q9Y5I7 SNORA27.4-201ENST00000516650 95 ntBASIC1.84□□□□□ -2.11
CLDN16Q9Y5I7 RNA5SP481-201ENST00000516814 122 ntBASIC1.84□□□□□ -2.11
CLDN16Q9Y5I7 RNU2-56P-201ENST00000516826 190 ntBASIC1.84□□□□□ -2.11
CLDN16Q9Y5I7 SNORA31.17-201ENST00000516953 127 ntBASIC1.84□□□□□ -2.11
CLDN16Q9Y5I7 AC022217.4-201ENST00000604389 163 ntBASIC1.84□□□□□ -2.11
CLDN16Q9Y5I7 AC134026.1-201ENST00000623249 2239 ntBASIC1.84□□□□□ -2.11
CLDN16Q9Y5I7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
CLDN16Q9Y5I7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.83□□□□□ -2.12
CLDN16Q9Y5I7 MIR335-201ENST00000362173 94 ntBASIC1.83□□□□□ -2.12
CLDN16Q9Y5I7 Y_RNA.44-201ENST00000362676 108 ntBASIC1.83□□□□□ -2.12
CLDN16Q9Y5I7 RNU6-1048P-201ENST00000364054 107 ntBASIC1.83□□□□□ -2.12
CLDN16Q9Y5I7 SNORA63D-201ENST00000364359 132 ntBASIC1.83□□□□□ -2.12
CLDN16Q9Y5I7 RNU6-296P-201ENST00000384608 107 ntBASIC1.83□□□□□ -2.12
CLDN16Q9Y5I7 MTCO2P33-201ENST00000402100 465 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms