Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
CHMP2BQ9UQN3 Y_RNA.336-201ENST00000365307 109 ntBASIC0.83□□□□□ -2.28
CHMP2BQ9UQN3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.83□□□□□ -2.28
CHMP2BQ9UQN3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.83□□□□□ -2.28
CHMP2BQ9UQN3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.83□□□□□ -2.28
CHMP2BQ9UQN3 SNORD111.1-201ENST00000516421 86 ntBASIC0.83□□□□□ -2.28
CHMP2BQ9UQN3 RNU6-197P-201ENST00000516680 100 ntBASIC0.83□□□□□ -2.28
CHMP2BQ9UQN3 RNU7-30P-201ENST00000516835 62 ntBASIC0.83□□□□□ -2.28
CHMP2BQ9UQN3 AC090142.3-201ENST00000519012 385 ntBASIC0.83□□□□□ -2.28
CHMP2BQ9UQN3 MIR4298-201ENST00000584380 73 ntBASIC0.83□□□□□ -2.28
CHMP2BQ9UQN3 AC060780.3-201ENST00000589464 80 ntBASIC0.83□□□□□ -2.28
CHMP2BQ9UQN3 AC068790.6-201ENST00000602558 258 ntBASIC0.83□□□□□ -2.28
CHMP2BQ9UQN3 AC084782.3-201ENST00000612282 578 ntBASIC0.83□□□□□ -2.28
CHMP2BQ9UQN3 SNORD114-27-201ENST00000363766 70 ntBASIC0.82□□□□□ -2.28
CHMP2BQ9UQN3 MIR942-201ENST00000401111 86 ntBASIC0.82□□□□□ -2.28
CHMP2BQ9UQN3 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.82□□□□□ -2.28
CHMP2BQ9UQN3 RNU4-14P-201ENST00000410858 122 ntBASIC0.82□□□□□ -2.28
CHMP2BQ9UQN3 Y_RNA.621-201ENST00000411065 96 ntBASIC0.82□□□□□ -2.28
CHMP2BQ9UQN3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.82□□□□□ -2.28
CHMP2BQ9UQN3 RNU7-90P-201ENST00000459216 62 ntBASIC0.82□□□□□ -2.28
CHMP2BQ9UQN3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.82□□□□□ -2.28
CHMP2BQ9UQN3 Y_RNA.655-201ENST00000515919 96 ntBASIC0.82□□□□□ -2.28
CHMP2BQ9UQN3 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
CHMP2BQ9UQN3 MIR2355-201ENST00000517199 87 ntBASIC0.82□□□□□ -2.28
CHMP2BQ9UQN3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.82□□□□□ -2.28
CHMP2BQ9UQN3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.82□□□□□ -2.28
CHMP2BQ9UQN3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.82□□□□□ -2.28
CHMP2BQ9UQN3 snoU13.31-201ENST00000607291 104 ntBASIC0.82□□□□□ -2.28
CHMP2BQ9UQN3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.82□□□□□ -2.28
CHMP2BQ9UQN3 AL591926.4-201ENST00000616895 298 ntBASIC0.82□□□□□ -2.28
CHMP2BQ9UQN3 AC087588.2-201ENST00000617667 426 ntBASIC0.82□□□□□ -2.28
CHMP2BQ9UQN3 Y_RNA.101-201ENST00000363154 102 ntBASIC0.81□□□□□ -2.28
CHMP2BQ9UQN3 SNORD116-13-201ENST00000384408 92 ntBASIC0.81□□□□□ -2.28
CHMP2BQ9UQN3 MIR608-201ENST00000384820 100 ntBASIC0.81□□□□□ -2.28
CHMP2BQ9UQN3 MIR1298-201ENST00000408783 112 ntBASIC0.81□□□□□ -2.28
CHMP2BQ9UQN3 AC006461.1-201ENST00000412637 326 ntBASIC0.81□□□□□ -2.28
CHMP2BQ9UQN3 MTND1P34-201ENST00000438556 671 ntBASIC0.81□□□□□ -2.28
CHMP2BQ9UQN3 AC093019.1-201ENST00000443135 252 ntBASIC0.81□□□□□ -2.28
CHMP2BQ9UQN3 RNU6-307P-201ENST00000516743 106 ntBASIC0.81□□□□□ -2.28
CHMP2BQ9UQN3 MIR3973-201ENST00000579824 107 ntBASIC0.81□□□□□ -2.28
CHMP2BQ9UQN3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
CHMP2BQ9UQN3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.81□□□□□ -2.28
CHMP2BQ9UQN3 AL359757.2-201ENST00000624309 274 ntBASIC0.81□□□□□ -2.28
CHMP2BQ9UQN3 AL669831.3-213ENST00000636676 183 ntBASIC0.81□□□□□ -2.28
CHMP2BQ9UQN3 Y_RNA.72-201ENST00000362894 103 ntBASIC0.8□□□□□ -2.28
CHMP2BQ9UQN3 RNU6-926P-201ENST00000384075 107 ntBASIC0.8□□□□□ -2.28
CHMP2BQ9UQN3 RPS3AP1-201ENST00000413190 320 ntBASIC0.8□□□□□ -2.28
CHMP2BQ9UQN3 MTND4P28-201ENST00000426217 387 ntBASIC0.8□□□□□ -2.28
CHMP2BQ9UQN3 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.8□□□□□ -2.28
CHMP2BQ9UQN3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.8□□□□□ -2.28
CHMP2BQ9UQN3 AC005840.1-201ENST00000498412 377 ntBASIC0.8□□□□□ -2.28
CHMP2BQ9UQN3 PSMC1P5-201ENST00000512850 177 ntBASIC0.8□□□□□ -2.28
CHMP2BQ9UQN3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.8□□□□□ -2.28
CHMP2BQ9UQN3 SNORA25.10-201ENST00000515926 124 ntBASIC0.8□□□□□ -2.28
CHMP2BQ9UQN3 MIR4762-201ENST00000585261 75 ntBASIC0.8□□□□□ -2.28
CHMP2BQ9UQN3 CASC19-280ENST00000642102 1351 ntBASIC0.8□□□□□ -2.28
CHMP2BQ9UQN3 HSBP1P2-201ENST00000299671 229 ntBASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 RNA5SP264-201ENST00000363115 107 ntBASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 Y_RNA.172-201ENST00000363765 102 ntBASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 U8.5-201ENST00000364528 136 ntBASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 RNU6-1105P-201ENST00000384774 107 ntBASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 MIR452-201ENST00000385020 85 ntBASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 MIR605-201ENST00000385078 83 ntBASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 MIR100-201ENST00000385259 80 ntBASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 AL031003.1-201ENST00000404229 172 ntBASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 Y_RNA.592-201ENST00000410274 109 ntBASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 AL606490.4-201ENST00000423117 127 ntBASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 RPS20P10-201ENST00000451209 253 ntBASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 RNA5SP255-201ENST00000516370 107 ntBASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 AC011604.1-201ENST00000545978 196 ntBASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 MIR4769-201ENST00000584126 77 ntBASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 MIR6857-201ENST00000613267 93 ntBASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 AC106800.4-201ENST00000614905 153 ntBASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
CHMP2BQ9UQN3 RNU6-392P-201ENST00000364926 101 ntBASIC0.78□□□□□ -2.28
CHMP2BQ9UQN3 RNU6-767P-201ENST00000384132 107 ntBASIC0.78□□□□□ -2.28
CHMP2BQ9UQN3 MIR516B2-201ENST00000385190 85 ntBASIC0.78□□□□□ -2.28
CHMP2BQ9UQN3 SNORA69.1-201ENST00000390904 137 ntBASIC0.78□□□□□ -2.28
CHMP2BQ9UQN3 RNU6-1156P-201ENST00000410365 100 ntBASIC0.78□□□□□ -2.28
CHMP2BQ9UQN3 RNU2-64P-201ENST00000411315 191 ntBASIC0.78□□□□□ -2.28
CHMP2BQ9UQN3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.78□□□□□ -2.28
CHMP2BQ9UQN3 MTND4P17-201ENST00000470444 350 ntBASIC0.78□□□□□ -2.28
CHMP2BQ9UQN3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.78□□□□□ -2.28
CHMP2BQ9UQN3 AC108729.3-201ENST00000513484 108 ntBASIC0.78□□□□□ -2.28
CHMP2BQ9UQN3 SNORA70.12-201ENST00000516084 153 ntBASIC0.78□□□□□ -2.28
CHMP2BQ9UQN3 AC136628.3-201ENST00000521868 290 ntBASIC0.78□□□□□ -2.28
CHMP2BQ9UQN3 AP003716.2-201ENST00000528260 108 ntBASIC0.78□□□□□ -2.28
CHMP2BQ9UQN3 MIR4781-201ENST00000585250 76 ntBASIC0.78□□□□□ -2.28
CHMP2BQ9UQN3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
CHMP2BQ9UQN3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.78□□□□□ -2.28
CHMP2BQ9UQN3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.78□□□□□ -2.29
CHMP2BQ9UQN3 Y_RNA.577-201ENST00000384794 101 ntBASIC0.77□□□□□ -2.29
CHMP2BQ9UQN3 RNU2-54P-201ENST00000410299 190 ntBASIC0.77□□□□□ -2.29
CHMP2BQ9UQN3 RNU6-1199P-201ENST00000411249 104 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 202.9 ms