Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 Y_RNA.560-201ENST00000384689 102 ntBASIC-0.37□□□□□ -2.47
VPS29Q9UBQ0 MIR938-201ENST00000401216 83 ntBASIC-0.37□□□□□ -2.47
VPS29Q9UBQ0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.37□□□□□ -2.47
VPS29Q9UBQ0 AL354751.2-201ENST00000415471 210 ntBASIC-0.37□□□□□ -2.47
VPS29Q9UBQ0 RPL23AP54-201ENST00000495129 419 ntBASIC-0.37□□□□□ -2.47
VPS29Q9UBQ0 MTCO2P30-201ENST00000503662 364 ntBASIC-0.37□□□□□ -2.47
VPS29Q9UBQ0 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.37□□□□□ -2.47
VPS29Q9UBQ0 AC090897.1-201ENST00000580909 226 ntBASIC-0.37□□□□□ -2.47
VPS29Q9UBQ0 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.37□□□□□ -2.47
VPS29Q9UBQ0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.37□□□□□ -2.47
VPS29Q9UBQ0 U8.7-201ENST00000364940 136 ntBASIC-0.38□□□□□ -2.47
VPS29Q9UBQ0 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.38□□□□□ -2.47
VPS29Q9UBQ0 MIR522-201ENST00000385071 87 ntBASIC-0.38□□□□□ -2.47
VPS29Q9UBQ0 CYCSP46-201ENST00000423569 204 ntBASIC-0.38□□□□□ -2.47
VPS29Q9UBQ0 SUMO1P2-201ENST00000452524 304 ntBASIC-0.38□□□□□ -2.47
VPS29Q9UBQ0 RNA5SP268-201ENST00000516828 124 ntBASIC-0.38□□□□□ -2.47
VPS29Q9UBQ0 AL118558.2-201ENST00000556294 238 ntBASIC-0.38□□□□□ -2.47
VPS29Q9UBQ0 MIR4305-201ENST00000583252 102 ntBASIC-0.38□□□□□ -2.47
VPS29Q9UBQ0 AL354950.2-201ENST00000617939 290 ntBASIC-0.38□□□□□ -2.47
VPS29Q9UBQ0 AC098679.4-201ENST00000624241 654 ntBASIC-0.38□□□□□ -2.47
VPS29Q9UBQ0 U6.115-201ENST00000636045 103 ntBASIC-0.38□□□□□ -2.47
VPS29Q9UBQ0 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.39□□□□□ -2.47
VPS29Q9UBQ0 SNORD113-7-201ENST00000363762 77 ntBASIC-0.39□□□□□ -2.47
VPS29Q9UBQ0 Y_RNA.201-201ENST00000364052 96 ntBASIC-0.39□□□□□ -2.47
VPS29Q9UBQ0 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.39□□□□□ -2.47
VPS29Q9UBQ0 RNU6-127P-201ENST00000390897 107 ntBASIC-0.39□□□□□ -2.47
VPS29Q9UBQ0 MLLT10P1-201ENST00000418346 262 ntBASIC-0.39□□□□□ -2.47
VPS29Q9UBQ0 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.39□□□□□ -2.47
VPS29Q9UBQ0 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.39□□□□□ -2.47
VPS29Q9UBQ0 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.39□□□□□ -2.47
VPS29Q9UBQ0 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.39□□□□□ -2.47
VPS29Q9UBQ0 MRPS36P3-201ENST00000519284 130 ntBASIC-0.39□□□□□ -2.47
VPS29Q9UBQ0 AC090616.2-202ENST00000584248 222 ntBASIC-0.39□□□□□ -2.47
VPS29Q9UBQ0 AC072046.2-201ENST00000618366 268 ntBASIC-0.39□□□□□ -2.47
VPS29Q9UBQ0 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.4□□□□□ -2.47
VPS29Q9UBQ0 MTCO2P33-201ENST00000402100 465 ntBASIC-0.4□□□□□ -2.47
VPS29Q9UBQ0 AL358934.1-201ENST00000432346 324 ntBASIC-0.4□□□□□ -2.47
VPS29Q9UBQ0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.4□□□□□ -2.47
VPS29Q9UBQ0 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-0.4□□□□□ -2.47
VPS29Q9UBQ0 RNU7-187P-201ENST00000458985 68 ntBASIC-0.4□□□□□ -2.47
VPS29Q9UBQ0 MIR3913-1-201ENST00000577744 102 ntBASIC-0.4□□□□□ -2.47
VPS29Q9UBQ0 MIR4264-201ENST00000583520 66 ntBASIC-0.4□□□□□ -2.47
VPS29Q9UBQ0 AC005828.6-201ENST00000606610 232 ntBASIC-0.4□□□□□ -2.47
VPS29Q9UBQ0 MIR6755-201ENST00000619993 66 ntBASIC-0.4□□□□□ -2.47
VPS29Q9UBQ0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.4□□□□□ -2.47
VPS29Q9UBQ0 RNA5SP128-201ENST00000365305 116 ntBASIC-0.41□□□□□ -2.48
VPS29Q9UBQ0 SNORA51.10-201ENST00000384418 136 ntBASIC-0.41□□□□□ -2.48
VPS29Q9UBQ0 MIR570-201ENST00000384917 97 ntBASIC-0.41□□□□□ -2.48
VPS29Q9UBQ0 SNORD37.1-201ENST00000390968 65 ntBASIC-0.41□□□□□ -2.48
VPS29Q9UBQ0 AC092447.3-201ENST00000426027 686 ntBASIC-0.41□□□□□ -2.48
VPS29Q9UBQ0 UQCRBP2-201ENST00000447827 297 ntBASIC-0.41□□□□□ -2.48
VPS29Q9UBQ0 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.41□□□□□ -2.48
VPS29Q9UBQ0 AC026371.1-201ENST00000551867 419 ntBASIC-0.41□□□□□ -2.48
VPS29Q9UBQ0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.41□□□□□ -2.48
VPS29Q9UBQ0 AC010525.2-201ENST00000590920 195 ntBASIC-0.41□□□□□ -2.48
VPS29Q9UBQ0 AC008608.1-201ENST00000603910 127 ntBASIC-0.41□□□□□ -2.48
VPS29Q9UBQ0 FAM157A-202ENST00000615155 405 ntBASIC-0.41□□□□□ -2.48
VPS29Q9UBQ0 AC073534.2-201ENST00000620377 381 ntBASIC-0.41□□□□□ -2.48
VPS29Q9UBQ0 AC067863.3-201ENST00000624172 122 ntBASIC-0.41□□□□□ -2.48
VPS29Q9UBQ0 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.41□□□□□ -2.48
VPS29Q9UBQ0 FGF7P2-201ENST00000332473 296 ntBASIC-0.42□□□□□ -2.48
VPS29Q9UBQ0 SNORA36.1-201ENST00000363424 132 ntBASIC-0.42□□□□□ -2.48
VPS29Q9UBQ0 RNU4-28P-201ENST00000364739 141 ntBASIC-0.42□□□□□ -2.48
VPS29Q9UBQ0 RNU6-756P-201ENST00000383997 107 ntBASIC-0.42□□□□□ -2.48
VPS29Q9UBQ0 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.42□□□□□ -2.48
VPS29Q9UBQ0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.42□□□□□ -2.48
VPS29Q9UBQ0 MTCO1P20-201ENST00000425366 358 ntBASIC-0.42□□□□□ -2.48
VPS29Q9UBQ0 RPL17P19-201ENST00000489069 552 ntBASIC-0.42□□□□□ -2.48
VPS29Q9UBQ0 AC116353.2-201ENST00000505332 712 ntBASIC-0.42□□□□□ -2.48
VPS29Q9UBQ0 AC010486.3-201ENST00000511602 785 ntBASIC-0.42□□□□□ -2.48
VPS29Q9UBQ0 RNU7-129P-201ENST00000516128 62 ntBASIC-0.42□□□□□ -2.48
VPS29Q9UBQ0 AC133485.4-201ENST00000561835 220 ntBASIC-0.42□□□□□ -2.48
VPS29Q9UBQ0 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.42□□□□□ -2.48
VPS29Q9UBQ0 MIR1295B-201ENST00000636144 60 ntBASIC-0.42□□□□□ -2.48
VPS29Q9UBQ0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.42□□□□□ -2.48
VPS29Q9UBQ0 RNA5SP117-201ENST00000365294 118 ntBASIC-0.43□□□□□ -2.48
VPS29Q9UBQ0 MIR214-201ENST00000385214 110 ntBASIC-0.43□□□□□ -2.48
VPS29Q9UBQ0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.43□□□□□ -2.48
VPS29Q9UBQ0 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.43□□□□□ -2.48
VPS29Q9UBQ0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.43□□□□□ -2.48
VPS29Q9UBQ0 RNU6-329P-201ENST00000459618 107 ntBASIC-0.43□□□□□ -2.48
VPS29Q9UBQ0 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.43□□□□□ -2.48
VPS29Q9UBQ0 AC093023.1-201ENST00000547375 507 ntBASIC-0.43□□□□□ -2.48
VPS29Q9UBQ0 MIR4743-201ENST00000584576 69 ntBASIC-0.43□□□□□ -2.48
VPS29Q9UBQ0 POLR3GP2-201ENST00000588366 668 ntBASIC-0.43□□□□□ -2.48
VPS29Q9UBQ0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.43□□□□□ -2.48
VPS29Q9UBQ0 SNORD114-7-201ENST00000362520 77 ntBASIC-0.44□□□□□ -2.48
VPS29Q9UBQ0 SNORD50B-201ENST00000364995 70 ntBASIC-0.44□□□□□ -2.48
VPS29Q9UBQ0 RNU4-66P-201ENST00000365199 138 ntBASIC-0.44□□□□□ -2.48
VPS29Q9UBQ0 RNU6-281P-201ENST00000384212 103 ntBASIC-0.44□□□□□ -2.48
VPS29Q9UBQ0 RNU6-364P-201ENST00000384387 107 ntBASIC-0.44□□□□□ -2.48
VPS29Q9UBQ0 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.44□□□□□ -2.48
VPS29Q9UBQ0 MIR548H2-201ENST00000408874 88 ntBASIC-0.44□□□□□ -2.48
VPS29Q9UBQ0 ELOCP21-201ENST00000412558 336 ntBASIC-0.44□□□□□ -2.48
VPS29Q9UBQ0 BTF3P11-201ENST00000426582 477 ntBASIC-0.44□□□□□ -2.48
VPS29Q9UBQ0 AL606489.2-201ENST00000433886 234 ntBASIC-0.44□□□□□ -2.48
VPS29Q9UBQ0 AC069271.1-201ENST00000445577 156 ntBASIC-0.44□□□□□ -2.48
VPS29Q9UBQ0 RNU7-102P-201ENST00000458948 62 ntBASIC-0.44□□□□□ -2.48
VPS29Q9UBQ0 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.44□□□□□ -2.48
VPS29Q9UBQ0 SNORA18.4-201ENST00000516440 124 ntBASIC-0.44□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms