Protein–RNA interactions for Protein: Q9NPG4

PCDH12, Protocadherin-12, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12Q9NPG4 SNORA31.10-201ENST00000516482 106 ntBASIC2.28□□□□□ -2.04
PCDH12Q9NPG4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.28□□□□□ -2.04
PCDH12Q9NPG4 AC011604.1-201ENST00000545978 196 ntBASIC2.28□□□□□ -2.04
PCDH12Q9NPG4 MIR6766-201ENST00000622641 72 ntBASIC2.28□□□□□ -2.04
PCDH12Q9NPG4 ZNF720P1-201ENST00000562403 1939 ntBASIC2.27□□□□□ -2.05
PCDH12Q9NPG4 RNU6-439P-201ENST00000384188 106 ntBASIC2.27□□□□□ -2.05
PCDH12Q9NPG4 MIR1302-3-201ENST00000408128 138 ntBASIC2.27□□□□□ -2.05
PCDH12Q9NPG4 RNU6-1203P-201ENST00000410703 110 ntBASIC2.27□□□□□ -2.05
PCDH12Q9NPG4 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.27□□□□□ -2.05
PCDH12Q9NPG4 AL356320.1-201ENST00000429616 163 ntBASIC2.27□□□□□ -2.05
PCDH12Q9NPG4 STAG3L5P-204ENST00000443759 179 ntBASIC2.27□□□□□ -2.05
PCDH12Q9NPG4 AC008834.1-201ENST00000511612 175 ntBASIC2.27□□□□□ -2.05
PCDH12Q9NPG4 RNU6-570P-201ENST00000517051 105 ntBASIC2.27□□□□□ -2.05
PCDH12Q9NPG4 MIR3945-201ENST00000581853 98 ntBASIC2.27□□□□□ -2.05
PCDH12Q9NPG4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.27□□□□□ -2.05
PCDH12Q9NPG4 MIR8062-201ENST00000621515 85 ntBASIC2.27□□□□□ -2.05
PCDH12Q9NPG4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
PCDH12Q9NPG4 SNORA1B-201ENST00000362535 133 ntBASIC2.26□□□□□ -2.05
PCDH12Q9NPG4 Y_RNA.172-201ENST00000363765 102 ntBASIC2.26□□□□□ -2.05
PCDH12Q9NPG4 RNU6-1105P-201ENST00000384774 107 ntBASIC2.26□□□□□ -2.05
PCDH12Q9NPG4 MIR221-201ENST00000385135 110 ntBASIC2.26□□□□□ -2.05
PCDH12Q9NPG4 RNA5SP425-201ENST00000410336 112 ntBASIC2.26□□□□□ -2.05
PCDH12Q9NPG4 RN7SKP223-201ENST00000410582 62 ntBASIC2.26□□□□□ -2.05
PCDH12Q9NPG4 RPL30P13-201ENST00000418873 348 ntBASIC2.26□□□□□ -2.05
PCDH12Q9NPG4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.26□□□□□ -2.05
PCDH12Q9NPG4 MTCO1P5-201ENST00000433573 344 ntBASIC2.26□□□□□ -2.05
PCDH12Q9NPG4 AL118496.2-201ENST00000448300 230 ntBASIC2.26□□□□□ -2.05
PCDH12Q9NPG4 snoU13.9-201ENST00000458927 103 ntBASIC2.26□□□□□ -2.05
PCDH12Q9NPG4 POLR3GP1-201ENST00000594073 261 ntBASIC2.26□□□□□ -2.05
PCDH12Q9NPG4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.26□□□□□ -2.05
PCDH12Q9NPG4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
PCDH12Q9NPG4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
PCDH12Q9NPG4 RNU6-1123P-201ENST00000362347 106 ntBASIC2.25□□□□□ -2.05
PCDH12Q9NPG4 RNU6-1309P-201ENST00000363305 108 ntBASIC2.25□□□□□ -2.05
PCDH12Q9NPG4 SNORA70B-201ENST00000384210 135 ntBASIC2.25□□□□□ -2.05
PCDH12Q9NPG4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.25□□□□□ -2.05
PCDH12Q9NPG4 RN7SKP192-201ENST00000411291 327 ntBASIC2.25□□□□□ -2.05
PCDH12Q9NPG4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.25□□□□□ -2.05
PCDH12Q9NPG4 AL358176.2-201ENST00000425769 204 ntBASIC2.25□□□□□ -2.05
PCDH12Q9NPG4 PGBD4P5-201ENST00000445958 426 ntBASIC2.25□□□□□ -2.05
PCDH12Q9NPG4 HMGN2P23-201ENST00000456759 269 ntBASIC2.25□□□□□ -2.05
PCDH12Q9NPG4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.25□□□□□ -2.05
PCDH12Q9NPG4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.25□□□□□ -2.05
PCDH12Q9NPG4 AC073349.3-201ENST00000617616 186 ntBASIC2.25□□□□□ -2.05
PCDH12Q9NPG4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
PCDH12Q9NPG4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PCDH12Q9NPG4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
PCDH12Q9NPG4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
PCDH12Q9NPG4 Y_RNA.47-201ENST00000362697 108 ntBASIC2.24□□□□□ -2.05
PCDH12Q9NPG4 U8.2-201ENST00000363156 134 ntBASIC2.24□□□□□ -2.05
PCDH12Q9NPG4 SNORA67.3-201ENST00000384366 140 ntBASIC2.24□□□□□ -2.05
PCDH12Q9NPG4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.24□□□□□ -2.05
PCDH12Q9NPG4 SERF1AP1-201ENST00000514575 187 ntBASIC2.24□□□□□ -2.05
PCDH12Q9NPG4 RNU1-41P-201ENST00000516161 162 ntBASIC2.24□□□□□ -2.05
PCDH12Q9NPG4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.24□□□□□ -2.05
PCDH12Q9NPG4 RNU6-1338P-201ENST00000516328 91 ntBASIC2.24□□□□□ -2.05
PCDH12Q9NPG4 RNU1-48P-201ENST00000516400 162 ntBASIC2.24□□□□□ -2.05
PCDH12Q9NPG4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.24□□□□□ -2.05
PCDH12Q9NPG4 MIR1273D-201ENST00000577266 86 ntBASIC2.24□□□□□ -2.05
PCDH12Q9NPG4 AP003357.1-201ENST00000604497 148 ntBASIC2.24□□□□□ -2.05
PCDH12Q9NPG4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.24□□□□□ -2.05
PCDH12Q9NPG4 MIR6873-201ENST00000622788 63 ntBASIC2.24□□□□□ -2.05
PCDH12Q9NPG4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.23□□□□□ -2.05
PCDH12Q9NPG4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PCDH12Q9NPG4 Y_RNA.461-201ENST00000384263 103 ntBASIC2.23□□□□□ -2.05
PCDH12Q9NPG4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.23□□□□□ -2.05
PCDH12Q9NPG4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.23□□□□□ -2.05
PCDH12Q9NPG4 AC021506.2-201ENST00000612354 169 ntBASIC2.23□□□□□ -2.05
PCDH12Q9NPG4 AL078604.3-201ENST00000615580 211 ntBASIC2.23□□□□□ -2.05
PCDH12Q9NPG4 MIR548AY-201ENST00000617669 107 ntBASIC2.23□□□□□ -2.05
PCDH12Q9NPG4 AL513423.1-201ENST00000621695 132 ntBASIC2.23□□□□□ -2.05
PCDH12Q9NPG4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PCDH12Q9NPG4 Y_RNA.376-201ENST00000365638 108 ntBASIC2.22□□□□□ -2.05
PCDH12Q9NPG4 Y_RNA.556-201ENST00000384677 113 ntBASIC2.22□□□□□ -2.05
PCDH12Q9NPG4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PCDH12Q9NPG4 MTCO2P24-201ENST00000515611 426 ntBASIC2.22□□□□□ -2.05
PCDH12Q9NPG4 RNU7-115P-201ENST00000516433 55 ntBASIC2.22□□□□□ -2.05
PCDH12Q9NPG4 Y_RNA.714-201ENST00000517065 90 ntBASIC2.22□□□□□ -2.05
PCDH12Q9NPG4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.22□□□□□ -2.05
PCDH12Q9NPG4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.22□□□□□ -2.05
PCDH12Q9NPG4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
PCDH12Q9NPG4 AL391987.6-201ENST00000305671 199 ntBASIC2.21□□□□□ -2.06
PCDH12Q9NPG4 MIR424-201ENST00000362227 98 ntBASIC2.21□□□□□ -2.06
PCDH12Q9NPG4 RNU6-899P-201ENST00000363947 107 ntBASIC2.21□□□□□ -2.06
PCDH12Q9NPG4 SNORA72.4-201ENST00000384174 132 ntBASIC2.21□□□□□ -2.06
PCDH12Q9NPG4 AC004965.1-201ENST00000413033 213 ntBASIC2.21□□□□□ -2.06
PCDH12Q9NPG4 AC104332.1-201ENST00000440471 797 ntBASIC2.21□□□□□ -2.06
PCDH12Q9NPG4 AC079804.2-201ENST00000490376 200 ntBASIC2.21□□□□□ -2.06
PCDH12Q9NPG4 RPL23AP54-201ENST00000495129 419 ntBASIC2.21□□□□□ -2.06
PCDH12Q9NPG4 AC091959.1-201ENST00000495857 238 ntBASIC2.21□□□□□ -2.06
PCDH12Q9NPG4 SNORA27.4-201ENST00000516650 95 ntBASIC2.21□□□□□ -2.06
PCDH12Q9NPG4 SCARNA24.2-201ENST00000516968 130 ntBASIC2.21□□□□□ -2.06
PCDH12Q9NPG4 DEFB108E-201ENST00000524692 240 ntBASIC2.21□□□□□ -2.06
PCDH12Q9NPG4 AC009831.4-201ENST00000620744 325 ntBASIC2.21□□□□□ -2.06
PCDH12Q9NPG4 ICE2P2-201ENST00000483823 2787 ntBASIC2.21□□□□□ -2.06
PCDH12Q9NPG4 MIR335-201ENST00000362173 94 ntBASIC2.2□□□□□ -2.06
PCDH12Q9NPG4 Y_RNA.16-201ENST00000362421 102 ntBASIC2.2□□□□□ -2.06
PCDH12Q9NPG4 SNORD33-201ENST00000362761 85 ntBASIC2.2□□□□□ -2.06
PCDH12Q9NPG4 RNU6-1080P-201ENST00000383982 107 ntBASIC2.2□□□□□ -2.06
PCDH12Q9NPG4 Y_RNA.512-201ENST00000384518 102 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 334.8 ms