Protein–RNA interactions for Protein: Q9H4Z3

PCIF1, Phosphorylated CTD-interacting factor 1, humanhuman

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1Q9H4Z3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
PCIF1Q9H4Z3 Y_RNA.121-201ENST00000363309 113 ntBASIC2.59□□□□□ -1.99
PCIF1Q9H4Z3 Y_RNA.182-201ENST00000363880 111 ntBASIC2.59□□□□□ -1.99
PCIF1Q9H4Z3 Y_RNA.412-201ENST00000384001 104 ntBASIC2.59□□□□□ -1.99
PCIF1Q9H4Z3 AL603908.1-201ENST00000406098 201 ntBASIC2.59□□□□□ -1.99
PCIF1Q9H4Z3 BX510359.4-201ENST00000423750 193 ntBASIC2.59□□□□□ -1.99
PCIF1Q9H4Z3 RNU6-437P-201ENST00000459408 95 ntBASIC2.59□□□□□ -1.99
PCIF1Q9H4Z3 SCARNA8-201ENST00000515924 131 ntBASIC2.59□□□□□ -1.99
PCIF1Q9H4Z3 RNU7-99P-201ENST00000516271 62 ntBASIC2.59□□□□□ -1.99
PCIF1Q9H4Z3 RNU6-453P-201ENST00000516819 85 ntBASIC2.59□□□□□ -1.99
PCIF1Q9H4Z3 RNU6-826P-201ENST00000516827 104 ntBASIC2.59□□□□□ -1.99
PCIF1Q9H4Z3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.59□□□□□ -1.99
PCIF1Q9H4Z3 MIR3670-2-201ENST00000582974 65 ntBASIC2.59□□□□□ -1.99
PCIF1Q9H4Z3 MIR3670-1-201ENST00000584160 65 ntBASIC2.59□□□□□ -1.99
PCIF1Q9H4Z3 MIR3670-3-201ENST00000584855 65 ntBASIC2.59□□□□□ -1.99
PCIF1Q9H4Z3 AC103810.6-201ENST00000606708 136 ntBASIC2.59□□□□□ -1.99
PCIF1Q9H4Z3 AL365434.2-201ENST00000607979 234 ntBASIC2.59□□□□□ -1.99
PCIF1Q9H4Z3 MIR3670-4-201ENST00000612260 65 ntBASIC2.59□□□□□ -1.99
PCIF1Q9H4Z3 AC010297.1-201ENST00000623948 149 ntBASIC2.59□□□□□ -1.99
PCIF1Q9H4Z3 MIR1291-201ENST00000627649 87 ntBASIC2.59□□□□□ -1.99
PCIF1Q9H4Z3 CTSLP2-204ENST00000629029 392 ntBASIC2.59□□□□□ -1.99
PCIF1Q9H4Z3 RNU4-82P-201ENST00000362443 140 ntBASIC2.58□□□□□ -2
PCIF1Q9H4Z3 RNU6-862P-201ENST00000362804 105 ntBASIC2.58□□□□□ -2
PCIF1Q9H4Z3 Y_RNA.229-201ENST00000364347 113 ntBASIC2.58□□□□□ -2
PCIF1Q9H4Z3 Y_RNA.464-201ENST00000384282 110 ntBASIC2.58□□□□□ -2
PCIF1Q9H4Z3 SNORA72-201ENST00000384339 132 ntBASIC2.58□□□□□ -2
PCIF1Q9H4Z3 MIR29C-201ENST00000385231 88 ntBASIC2.58□□□□□ -2
PCIF1Q9H4Z3 RNU5E-9P-201ENST00000411164 104 ntBASIC2.58□□□□□ -2
PCIF1Q9H4Z3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.58□□□□□ -2
PCIF1Q9H4Z3 AC099677.2-201ENST00000436385 175 ntBASIC2.58□□□□□ -2
PCIF1Q9H4Z3 AC245047.8-201ENST00000456455 284 ntBASIC2.58□□□□□ -2
PCIF1Q9H4Z3 RPS29P21-201ENST00000496272 170 ntBASIC2.58□□□□□ -2
PCIF1Q9H4Z3 MRPS18CP4-201ENST00000535821 231 ntBASIC2.58□□□□□ -2
PCIF1Q9H4Z3 AL929325.1-201ENST00000603096 117 ntBASIC2.58□□□□□ -2
PCIF1Q9H4Z3 AC067747.1-201ENST00000608026 250 ntBASIC2.58□□□□□ -2
PCIF1Q9H4Z3 AL359075.3-201ENST00000613288 217 ntBASIC2.58□□□□□ -2
PCIF1Q9H4Z3 RNU1-58P-201ENST00000362413 163 ntBASIC2.57□□□□□ -2
PCIF1Q9H4Z3 SNORA67.4-201ENST00000384688 142 ntBASIC2.57□□□□□ -2
PCIF1Q9H4Z3 RNA5SP181-201ENST00000410246 98 ntBASIC2.57□□□□□ -2
PCIF1Q9H4Z3 AC091021.1-201ENST00000468051 388 ntBASIC2.57□□□□□ -2
PCIF1Q9H4Z3 RNA5SP137-201ENST00000516833 135 ntBASIC2.57□□□□□ -2
PCIF1Q9H4Z3 RNU6-255P-201ENST00000516957 105 ntBASIC2.57□□□□□ -2
PCIF1Q9H4Z3 RNU6-1096P-201ENST00000517089 102 ntBASIC2.57□□□□□ -2
PCIF1Q9H4Z3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.57□□□□□ -2
PCIF1Q9H4Z3 Y_RNA.75-201ENST00000362927 97 ntBASIC2.56□□□□□ -2
PCIF1Q9H4Z3 RNU1-109P-201ENST00000383960 147 ntBASIC2.56□□□□□ -2
PCIF1Q9H4Z3 MIR616-201ENST00000385293 97 ntBASIC2.56□□□□□ -2
PCIF1Q9H4Z3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.56□□□□□ -2
PCIF1Q9H4Z3 CST2P1-201ENST00000425770 87 ntBASIC2.56□□□□□ -2
PCIF1Q9H4Z3 RPS15AP28-201ENST00000435088 386 ntBASIC2.56□□□□□ -2
PCIF1Q9H4Z3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.56□□□□□ -2
PCIF1Q9H4Z3 RNU6-1007P-201ENST00000516586 107 ntBASIC2.56□□□□□ -2
PCIF1Q9H4Z3 RNU6-1212P-201ENST00000517023 104 ntBASIC2.56□□□□□ -2
PCIF1Q9H4Z3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.56□□□□□ -2
PCIF1Q9H4Z3 MIR5688-201ENST00000580619 83 ntBASIC2.56□□□□□ -2
PCIF1Q9H4Z3 AC108706.1-201ENST00000611053 297 ntBASIC2.56□□□□□ -2
PCIF1Q9H4Z3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.56□□□□□ -2
PCIF1Q9H4Z3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.56□□□□□ -2
PCIF1Q9H4Z3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.56□□□□□ -2
PCIF1Q9H4Z3 AC016717.2-201ENST00000609089 5141 ntBASIC2.55□□□□□ -2
PCIF1Q9H4Z3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PCIF1Q9H4Z3 MIR6073-201ENST00000352083 89 ntBASIC2.55□□□□□ -2
PCIF1Q9H4Z3 RNU6-103P-201ENST00000363686 107 ntBASIC2.55□□□□□ -2
PCIF1Q9H4Z3 RNU6-674P-201ENST00000363831 107 ntBASIC2.55□□□□□ -2
PCIF1Q9H4Z3 MIR597-201ENST00000384968 97 ntBASIC2.55□□□□□ -2
PCIF1Q9H4Z3 MT-TT-201ENST00000387460 66 ntBASIC2.55□□□□□ -2
PCIF1Q9H4Z3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.55□□□□□ -2
PCIF1Q9H4Z3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.55□□□□□ -2
PCIF1Q9H4Z3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.55□□□□□ -2
PCIF1Q9H4Z3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.55□□□□□ -2
PCIF1Q9H4Z3 RPS26P45-201ENST00000471748 340 ntBASIC2.55□□□□□ -2
PCIF1Q9H4Z3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.55□□□□□ -2
PCIF1Q9H4Z3 AC011604.1-201ENST00000545978 196 ntBASIC2.55□□□□□ -2
PCIF1Q9H4Z3 MIR4744-201ENST00000581563 82 ntBASIC2.55□□□□□ -2
PCIF1Q9H4Z3 AC091178.2-201ENST00000584401 117 ntBASIC2.55□□□□□ -2
PCIF1Q9H4Z3 AL391903.3-201ENST00000612158 163 ntBASIC2.55□□□□□ -2
PCIF1Q9H4Z3 AC100821.1-201ENST00000523153 2479 ntBASIC2.54□□□□□ -2
PCIF1Q9H4Z3 RNU6-275P-201ENST00000364910 107 ntBASIC2.54□□□□□ -2
PCIF1Q9H4Z3 MIR520G-201ENST00000385064 90 ntBASIC2.54□□□□□ -2
PCIF1Q9H4Z3 RNA5SP323-201ENST00000391094 133 ntBASIC2.54□□□□□ -2
PCIF1Q9H4Z3 MIR1283-2-201ENST00000408621 87 ntBASIC2.54□□□□□ -2
PCIF1Q9H4Z3 MIR1278-201ENST00000408753 81 ntBASIC2.54□□□□□ -2
PCIF1Q9H4Z3 TRBV12-1-201ENST00000479785 344 ntBASIC2.54□□□□□ -2
PCIF1Q9H4Z3 Y_RNA.797-201ENST00000515977 94 ntBASIC2.54□□□□□ -2
PCIF1Q9H4Z3 RNA5SP281-201ENST00000516504 135 ntBASIC2.54□□□□□ -2
PCIF1Q9H4Z3 RNU6-1291P-201ENST00000516591 104 ntBASIC2.54□□□□□ -2
PCIF1Q9H4Z3 RNU1-142P-201ENST00000516682 145 ntBASIC2.54□□□□□ -2
PCIF1Q9H4Z3 SNORD14A-201ENST00000606526 91 ntBASIC2.54□□□□□ -2
PCIF1Q9H4Z3 AC007336.1-201ENST00000576365 3828 ntBASIC2.54□□□□□ -2
PCIF1Q9H4Z3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.53□□□□□ -2
PCIF1Q9H4Z3 AC245060.5-201ENST00000610778 3293 ntBASIC2.53□□□□□ -2
PCIF1Q9H4Z3 Y_RNA.203-201ENST00000364106 102 ntBASIC2.53□□□□□ -2
PCIF1Q9H4Z3 RNU4-41P-201ENST00000364426 143 ntBASIC2.53□□□□□ -2
PCIF1Q9H4Z3 Y_RNA.441-201ENST00000384123 112 ntBASIC2.53□□□□□ -2
PCIF1Q9H4Z3 SNORA8-201ENST00000384574 139 ntBASIC2.53□□□□□ -2
PCIF1Q9H4Z3 MIR515-2-201ENST00000384883 83 ntBASIC2.53□□□□□ -2
PCIF1Q9H4Z3 MIR515-1-201ENST00000384884 83 ntBASIC2.53□□□□□ -2
PCIF1Q9H4Z3 RNU6-578P-201ENST00000390980 103 ntBASIC2.53□□□□□ -2
PCIF1Q9H4Z3 RN7SKP101-201ENST00000411376 320 ntBASIC2.53□□□□□ -2
PCIF1Q9H4Z3 AC018634.1-201ENST00000437554 401 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms