Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.08□□□□□ -2.4
VCX3BQ9H321 MIR6863-201ENST00000636112 90 ntBASIC0.08□□□□□ -2.4
VCX3BQ9H321 Y_RNA.191-201ENST00000363972 113 ntBASIC0.07□□□□□ -2.4
VCX3BQ9H321 Y_RNA.243-201ENST00000364481 109 ntBASIC0.07□□□□□ -2.4
VCX3BQ9H321 Y_RNA.370-201ENST00000365589 108 ntBASIC0.07□□□□□ -2.4
VCX3BQ9H321 Y_RNA.553-201ENST00000384670 102 ntBASIC0.07□□□□□ -2.4
VCX3BQ9H321 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.07□□□□□ -2.4
VCX3BQ9H321 MIR1295A-201ENST00000408463 79 ntBASIC0.07□□□□□ -2.4
VCX3BQ9H321 AC015818.7-201ENST00000428754 109 ntBASIC0.07□□□□□ -2.4
VCX3BQ9H321 AC087499.7-201ENST00000441958 109 ntBASIC0.07□□□□□ -2.4
VCX3BQ9H321 HMGN2P32-201ENST00000444648 269 ntBASIC0.07□□□□□ -2.4
VCX3BQ9H321 SNRPGP12-201ENST00000449481 213 ntBASIC0.07□□□□□ -2.4
VCX3BQ9H321 RNU6-625P-201ENST00000459412 107 ntBASIC0.07□□□□□ -2.4
VCX3BQ9H321 SNORA25.10-201ENST00000515926 124 ntBASIC0.07□□□□□ -2.4
VCX3BQ9H321 SNORD45.4-201ENST00000516629 73 ntBASIC0.07□□□□□ -2.4
VCX3BQ9H321 Y_RNA.693-201ENST00000516641 110 ntBASIC0.07□□□□□ -2.4
VCX3BQ9H321 MIR3612-201ENST00000579753 87 ntBASIC0.07□□□□□ -2.4
VCX3BQ9H321 MIR4273-201ENST00000582824 84 ntBASIC0.07□□□□□ -2.4
VCX3BQ9H321 MIR3672-201ENST00000584290 82 ntBASIC0.07□□□□□ -2.4
VCX3BQ9H321 AC121247.2-201ENST00000604776 136 ntBASIC0.07□□□□□ -2.4
VCX3BQ9H321 AL162730.1-201ENST00000605734 292 ntBASIC0.07□□□□□ -2.4
VCX3BQ9H321 AL359880.1-201ENST00000621879 266 ntBASIC0.07□□□□□ -2.4
VCX3BQ9H321 AC091925.1-201ENST00000623204 462 ntBASIC0.07□□□□□ -2.4
VCX3BQ9H321 MIR3674-201ENST00000636576 68 ntBASIC0.07□□□□□ -2.4
VCX3BQ9H321 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.07□□□□□ -2.4
VCX3BQ9H321 MIR377-201ENST00000362145 69 ntBASIC0.06□□□□□ -2.4
VCX3BQ9H321 RNU6-1059P-201ENST00000363752 98 ntBASIC0.06□□□□□ -2.4
VCX3BQ9H321 Y_RNA.256-201ENST00000364594 104 ntBASIC0.06□□□□□ -2.4
VCX3BQ9H321 SNORD83.1-201ENST00000411362 77 ntBASIC0.06□□□□□ -2.4
VCX3BQ9H321 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.06□□□□□ -2.4
VCX3BQ9H321 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.06□□□□□ -2.4
VCX3BQ9H321 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.06□□□□□ -2.4
VCX3BQ9H321 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.06□□□□□ -2.4
VCX3BQ9H321 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.06□□□□□ -2.4
VCX3BQ9H321 RNU6-1337P-201ENST00000516525 95 ntBASIC0.06□□□□□ -2.4
VCX3BQ9H321 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.06□□□□□ -2.4
VCX3BQ9H321 MIR151B-201ENST00000584249 96 ntBASIC0.06□□□□□ -2.4
VCX3BQ9H321 MIR4760-201ENST00000585040 80 ntBASIC0.06□□□□□ -2.4
VCX3BQ9H321 DISC2.1-201ENST00000612827 205 ntBASIC0.06□□□□□ -2.4
VCX3BQ9H321 MIR6504-201ENST00000613520 61 ntBASIC0.06□□□□□ -2.4
VCX3BQ9H321 SNORD44.1-201ENST00000363202 61 ntBASIC0.05□□□□□ -2.4
VCX3BQ9H321 RNA5SP62-201ENST00000363457 110 ntBASIC0.05□□□□□ -2.4
VCX3BQ9H321 SNORD45.3-201ENST00000363836 72 ntBASIC0.05□□□□□ -2.4
VCX3BQ9H321 snoU2-30.1-201ENST00000365012 70 ntBASIC0.05□□□□□ -2.4
VCX3BQ9H321 Y_RNA.414-201ENST00000384011 101 ntBASIC0.05□□□□□ -2.4
VCX3BQ9H321 Y_RNA.498-201ENST00000384460 102 ntBASIC0.05□□□□□ -2.4
VCX3BQ9H321 MIR520F-201ENST00000384824 87 ntBASIC0.05□□□□□ -2.4
VCX3BQ9H321 RNU6-780P-201ENST00000391030 104 ntBASIC0.05□□□□□ -2.4
VCX3BQ9H321 MTCO3P40-201ENST00000392516 676 ntBASIC0.05□□□□□ -2.4
VCX3BQ9H321 MIR1276-201ENST00000408707 83 ntBASIC0.05□□□□□ -2.4
VCX3BQ9H321 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.05□□□□□ -2.4
VCX3BQ9H321 MTND1P26-201ENST00000440488 538 ntBASIC0.05□□□□□ -2.4
VCX3BQ9H321 RNU6-329P-201ENST00000459618 107 ntBASIC0.05□□□□□ -2.4
VCX3BQ9H321 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.05□□□□□ -2.4
VCX3BQ9H321 MIR4452-201ENST00000583004 71 ntBASIC0.05□□□□□ -2.4
VCX3BQ9H321 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
VCX3BQ9H321 MTND5P26-201ENST00000426018 1752 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 RNU6-874P-201ENST00000362390 105 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 Y_RNA.48-201ENST00000362710 103 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 SNORD115-30-201ENST00000364117 82 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 RNA5SP517-201ENST00000364724 117 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 SNORD116-11-201ENST00000383882 92 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 MIR518A1-201ENST00000385068 85 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 MT-TN-201ENST00000387400 73 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 RNU6-908P-201ENST00000410160 94 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 SNORD71-201ENST00000411292 86 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.04□□□□□ -2.4
VCX3BQ9H321 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.04□□□□□ -2.4
VCX3BQ9H321 U8.22-201ENST00000459141 133 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 AC010424.1-201ENST00000506336 297 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 AC010486.3-201ENST00000511602 785 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 SNORA40.9-201ENST00000515895 93 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 Y_RNA.717-201ENST00000517106 92 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 AL512360.1-201ENST00000555346 234 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 AC022523.2-201ENST00000561045 150 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 AL355375.2-201ENST00000574825 175 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 MIR4711-201ENST00000578274 70 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 MIR548AR-201ENST00000582191 57 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 AC119751.7-201ENST00000600494 245 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 AL162413.1-201ENST00000603198 110 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 RBM11P1-201ENST00000604951 799 ntBASIC0.04□□□□□ -2.4
VCX3BQ9H321 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.04□□□□□ -2.4
VCX3BQ9H321 RNU6-1084P-201ENST00000362498 107 ntBASIC0.03□□□□□ -2.4
VCX3BQ9H321 RNU6-879P-201ENST00000364328 108 ntBASIC0.03□□□□□ -2.4
VCX3BQ9H321 SNORD50B-201ENST00000364995 70 ntBASIC0.03□□□□□ -2.4
VCX3BQ9H321 RNU6-396P-201ENST00000365369 105 ntBASIC0.03□□□□□ -2.4
VCX3BQ9H321 Y_RNA.364-201ENST00000365532 101 ntBASIC0.03□□□□□ -2.4
VCX3BQ9H321 Y_RNA.376-201ENST00000365638 108 ntBASIC0.03□□□□□ -2.4
VCX3BQ9H321 RNU6-842P-201ENST00000384269 107 ntBASIC0.03□□□□□ -2.4
VCX3BQ9H321 MIR570-201ENST00000384917 97 ntBASIC0.03□□□□□ -2.4
VCX3BQ9H321 DEFB108C-201ENST00000400154 252 ntBASIC0.03□□□□□ -2.4
VCX3BQ9H321 MIR190B-201ENST00000401119 79 ntBASIC0.03□□□□□ -2.4
VCX3BQ9H321 RNA5SP475-201ENST00000410568 110 ntBASIC0.03□□□□□ -2.4
VCX3BQ9H321 MLLT10P1-201ENST00000418346 262 ntBASIC0.03□□□□□ -2.4
VCX3BQ9H321 SNRPGP10-201ENST00000432323 225 ntBASIC0.03□□□□□ -2.4
VCX3BQ9H321 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.03□□□□□ -2.4
VCX3BQ9H321 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.03□□□□□ -2.4
VCX3BQ9H321 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.03□□□□□ -2.4
VCX3BQ9H321 RNU6-1281P-201ENST00000516223 105 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms