Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 MIR4724-201ENST00000579485 89 ntBASIC2.74□□□□□ -1.97
CCDC113Q9H0I3 MIR5092-201ENST00000583139 88 ntBASIC2.74□□□□□ -1.97
CCDC113Q9H0I3 AC069114.2-201ENST00000604699 304 ntBASIC2.74□□□□□ -1.97
CCDC113Q9H0I3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.74□□□□□ -1.97
CCDC113Q9H0I3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC113Q9H0I3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC113Q9H0I3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC113Q9H0I3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC113Q9H0I3 MIR367-201ENST00000362299 68 ntBASIC2.73□□□□□ -1.97
CCDC113Q9H0I3 SNORA33-201ENST00000363664 130 ntBASIC2.73□□□□□ -1.97
CCDC113Q9H0I3 RNU6-1020P-201ENST00000363684 107 ntBASIC2.73□□□□□ -1.97
CCDC113Q9H0I3 RNA5SP456-201ENST00000364002 114 ntBASIC2.73□□□□□ -1.97
CCDC113Q9H0I3 SNORA72-201ENST00000384339 132 ntBASIC2.73□□□□□ -1.97
CCDC113Q9H0I3 MIR562-201ENST00000384894 95 ntBASIC2.73□□□□□ -1.97
CCDC113Q9H0I3 MIR1283-2-201ENST00000408621 87 ntBASIC2.73□□□□□ -1.97
CCDC113Q9H0I3 RPS4XP11-201ENST00000446897 772 ntBASIC2.73□□□□□ -1.97
CCDC113Q9H0I3 AC127455.1-201ENST00000565496 145 ntBASIC2.73□□□□□ -1.97
CCDC113Q9H0I3 MIR6079-201ENST00000635807 62 ntBASIC2.73□□□□□ -1.97
CCDC113Q9H0I3 AC018630.2-201ENST00000534866 2403 ntBASIC2.72□□□□□ -1.97
CCDC113Q9H0I3 SNORA25.6-201ENST00000364121 118 ntBASIC2.72□□□□□ -1.97
CCDC113Q9H0I3 Y_RNA.267-201ENST00000364679 109 ntBASIC2.72□□□□□ -1.97
CCDC113Q9H0I3 Y_RNA.785-201ENST00000384290 109 ntBASIC2.72□□□□□ -1.97
CCDC113Q9H0I3 RNU6-493P-201ENST00000391321 108 ntBASIC2.72□□□□□ -1.97
CCDC113Q9H0I3 AL359511.1-201ENST00000402970 211 ntBASIC2.72□□□□□ -1.97
CCDC113Q9H0I3 AC091021.1-201ENST00000468051 388 ntBASIC2.72□□□□□ -1.97
CCDC113Q9H0I3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC113Q9H0I3 RNU7-193P-201ENST00000516723 65 ntBASIC2.72□□□□□ -1.97
CCDC113Q9H0I3 RNU7-128P-201ENST00000517247 62 ntBASIC2.72□□□□□ -1.97
CCDC113Q9H0I3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC113Q9H0I3 AC011604.1-201ENST00000545978 196 ntBASIC2.72□□□□□ -1.97
CCDC113Q9H0I3 CTSLP2-204ENST00000629029 392 ntBASIC2.72□□□□□ -1.97
CCDC113Q9H0I3 ZNF271P-202ENST00000465539 1970 ntBASIC2.72□□□□□ -1.97
CCDC113Q9H0I3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CCDC113Q9H0I3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CCDC113Q9H0I3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CCDC113Q9H0I3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC113Q9H0I3 AC016717.2-201ENST00000609089 5141 ntBASIC2.71□□□□□ -1.98
CCDC113Q9H0I3 RNU6-1019P-201ENST00000364424 107 ntBASIC2.71□□□□□ -1.98
CCDC113Q9H0I3 RNU6-437P-201ENST00000459408 95 ntBASIC2.71□□□□□ -1.98
CCDC113Q9H0I3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC113Q9H0I3 AC021269.2-201ENST00000532318 330 ntBASIC2.71□□□□□ -1.98
CCDC113Q9H0I3 U6.108-201ENST00000637764 58 ntBASIC2.71□□□□□ -1.98
CCDC113Q9H0I3 Y_RNA.24-201ENST00000362508 103 ntBASIC2.7□□□□□ -1.98
CCDC113Q9H0I3 RNU6-653P-201ENST00000363074 106 ntBASIC2.7□□□□□ -1.98
CCDC113Q9H0I3 RNU4-10P-201ENST00000364383 140 ntBASIC2.7□□□□□ -1.98
CCDC113Q9H0I3 RNU1-51P-201ENST00000365345 176 ntBASIC2.7□□□□□ -1.98
CCDC113Q9H0I3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CCDC113Q9H0I3 RNA5SP181-201ENST00000410246 98 ntBASIC2.7□□□□□ -1.98
CCDC113Q9H0I3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC113Q9H0I3 TRBV12-1-201ENST00000479785 344 ntBASIC2.7□□□□□ -1.98
CCDC113Q9H0I3 SNORA31.25-201ENST00000517242 134 ntBASIC2.7□□□□□ -1.98
CCDC113Q9H0I3 AP002392.1-201ENST00000537692 208 ntBASIC2.7□□□□□ -1.98
CCDC113Q9H0I3 U1.36-201ENST00000620684 176 ntBASIC2.7□□□□□ -1.98
CCDC113Q9H0I3 AC022513.1-201ENST00000624512 117 ntBASIC2.7□□□□□ -1.98
CCDC113Q9H0I3 RNU4-17P-201ENST00000365598 141 ntBASIC2.69□□□□□ -1.98
CCDC113Q9H0I3 AC069257.2-201ENST00000441819 155 ntBASIC2.69□□□□□ -1.98
CCDC113Q9H0I3 RNU6-1291P-201ENST00000516591 104 ntBASIC2.69□□□□□ -1.98
CCDC113Q9H0I3 RNU6-341P-201ENST00000516973 96 ntBASIC2.69□□□□□ -1.98
CCDC113Q9H0I3 AC100767.1-201ENST00000528178 123 ntBASIC2.69□□□□□ -1.98
CCDC113Q9H0I3 AC084364.2-201ENST00000546924 395 ntBASIC2.69□□□□□ -1.98
CCDC113Q9H0I3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC113Q9H0I3 AC078899.2-201ENST00000595282 212 ntBASIC2.69□□□□□ -1.98
CCDC113Q9H0I3 AC004792.1-201ENST00000614523 137 ntBASIC2.69□□□□□ -1.98
CCDC113Q9H0I3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CCDC113Q9H0I3 RNA5SP289-201ENST00000362332 137 ntBASIC2.68□□□□□ -1.98
CCDC113Q9H0I3 MIR626-201ENST00000385032 94 ntBASIC2.68□□□□□ -1.98
CCDC113Q9H0I3 MIR526A2-201ENST00000390198 65 ntBASIC2.68□□□□□ -1.98
CCDC113Q9H0I3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC113Q9H0I3 COX6CP10-201ENST00000416832 224 ntBASIC2.68□□□□□ -1.98
CCDC113Q9H0I3 PIGPP3-201ENST00000425307 415 ntBASIC2.68□□□□□ -1.98
CCDC113Q9H0I3 RPS26P45-201ENST00000471748 340 ntBASIC2.68□□□□□ -1.98
CCDC113Q9H0I3 MIR5688-201ENST00000580619 83 ntBASIC2.68□□□□□ -1.98
CCDC113Q9H0I3 MIR2681-201ENST00000581814 105 ntBASIC2.68□□□□□ -1.98
CCDC113Q9H0I3 AC091178.2-201ENST00000584401 117 ntBASIC2.68□□□□□ -1.98
CCDC113Q9H0I3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC113Q9H0I3 AC103810.6-201ENST00000606708 136 ntBASIC2.68□□□□□ -1.98
CCDC113Q9H0I3 AC245884.12-201ENST00000615364 59 ntBASIC2.68□□□□□ -1.98
CCDC113Q9H0I3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC113Q9H0I3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
CCDC113Q9H0I3 MIR6073-201ENST00000352083 89 ntBASIC2.67□□□□□ -1.98
CCDC113Q9H0I3 RNU4-41P-201ENST00000364426 143 ntBASIC2.67□□□□□ -1.98
CCDC113Q9H0I3 RNU6-969P-201ENST00000383900 105 ntBASIC2.67□□□□□ -1.98
CCDC113Q9H0I3 MIR144-201ENST00000384886 86 ntBASIC2.67□□□□□ -1.98
CCDC113Q9H0I3 AL512604.1-201ENST00000404812 257 ntBASIC2.67□□□□□ -1.98
CCDC113Q9H0I3 RNU2-7P-201ENST00000410794 178 ntBASIC2.67□□□□□ -1.98
CCDC113Q9H0I3 RNU6-383P-201ENST00000410864 94 ntBASIC2.67□□□□□ -1.98
CCDC113Q9H0I3 RNA5SP501-201ENST00000410990 112 ntBASIC2.67□□□□□ -1.98
CCDC113Q9H0I3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC113Q9H0I3 RNVU1-2-201ENST00000516326 135 ntBASIC2.67□□□□□ -1.98
CCDC113Q9H0I3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC113Q9H0I3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC113Q9H0I3 CBX3P4-201ENST00000538909 354 ntBASIC2.67□□□□□ -1.98
CCDC113Q9H0I3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC113Q9H0I3 AC100821.1-201ENST00000523153 2479 ntBASIC2.66□□□□□ -1.98
CCDC113Q9H0I3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC113Q9H0I3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CCDC113Q9H0I3 RNU6-1080P-201ENST00000383982 107 ntBASIC2.66□□□□□ -1.98
CCDC113Q9H0I3 SNORA48.1-201ENST00000390879 135 ntBASIC2.66□□□□□ -1.98
CCDC113Q9H0I3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC113Q9H0I3 AC011753.1-201ENST00000451001 220 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 214.5 ms