Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 U4.5-201ENST00000617137 123 ntBASIC0.52□□□□□ -2.33
SLIRPQ9GZT3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.52□□□□□ -2.33
SLIRPQ9GZT3 RNU6-1301P-201ENST00000362724 104 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 RNU6-392P-201ENST00000364926 101 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 SNORD12B-201ENST00000410433 91 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 AC004941.2-201ENST00000427009 228 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 AC098869.1-201ENST00000481627 292 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 RNU6-720P-201ENST00000516363 108 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 RNU6-1337P-201ENST00000516525 95 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 Y_RNA.708-201ENST00000516950 96 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 MIR2355-201ENST00000517199 87 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 MTND4LP26-201ENST00000518144 282 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 AC109810.1-201ENST00000534066 224 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 AC104984.5-201ENST00000586878 94 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 AC018638.8-201ENST00000588755 281 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 MIR3688-2-201ENST00000636963 87 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 MIR520C-201ENST00000385005 87 ntBASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 MIR136-201ENST00000385207 82 ntBASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 RNU6-510P-201ENST00000391239 108 ntBASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 AC092423.1-201ENST00000430165 186 ntBASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 RPL23AP50-201ENST00000434149 455 ntBASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 AC093534.1-201ENST00000504977 132 ntBASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 RNU7-41P-201ENST00000515917 61 ntBASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 RN7SKP164-201ENST00000516138 266 ntBASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 AC025627.3-201ENST00000582078 182 ntBASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 AL359821.1-201ENST00000605519 182 ntBASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 AC023934.1-201ENST00000574529 2389 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 Y_RNA.339-201ENST00000365325 102 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 Y_RNA.436-201ENST00000384097 102 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 Y_RNA.453-201ENST00000384223 109 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 MIR15B-201ENST00000385045 98 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 MIR548F5-201ENST00000408421 86 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 Y_RNA.621-201ENST00000411065 96 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 RPS3AP52-201ENST00000435639 297 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 AC011604.1-201ENST00000545978 196 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 AC023827.1-201ENST00000569247 97 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 AC005899.2-201ENST00000584353 90 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 AL590095.2-201ENST00000604136 117 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 AC080013.6-201ENST00000606185 215 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 AC009229.3-201ENST00000608056 282 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 AC004467.1-201ENST00000615678 330 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 MIR6835-201ENST00000621552 64 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 SNORA25.3-201ENST00000363205 127 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 Y_RNA.482-201ENST00000384377 111 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 RNU6-601P-201ENST00000384540 107 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 MIR522-201ENST00000385071 87 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 MIR516B2-201ENST00000385190 85 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 RPL7P42-201ENST00000481005 679 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 RPL17P19-201ENST00000489069 552 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 HMGN1P7-201ENST00000491722 313 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 RNU6-408P-201ENST00000515910 100 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 SNORA25.10-201ENST00000515926 124 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 RNU6-1110P-201ENST00000516462 101 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 RNU7-43P-201ENST00000516554 64 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 AC022616.4-201ENST00000522985 181 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 MIR4764-201ENST00000580680 88 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 AC090517.2-201ENST00000614966 680 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 AC092794.2-201ENST00000620933 563 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 AL442644.1-201ENST00000454390 3105 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 Y_RNA.3-201ENST00000362331 103 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 RNU6-623P-201ENST00000363143 105 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 SNORD114-27-201ENST00000363766 70 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 Y_RNA.253-201ENST00000364562 112 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 SNORD14.1-201ENST00000365609 90 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 Y_RNA.404-201ENST00000383978 102 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 RNU6-1297P-201ENST00000384415 104 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 SNORD99-201ENST00000408612 74 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 MTND3P8-201ENST00000412909 339 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 MTND3P10-201ENST00000450967 341 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 AC116353.2-201ENST00000505332 712 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 AC108729.3-201ENST00000513484 108 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 RNU11-2P-201ENST00000516898 142 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 AC055872.1-201ENST00000570978 278 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 MIR6715A-201ENST00000615929 79 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 MIR373-201ENST00000362273 69 ntBASIC0.46□□□□□ -2.34
SLIRPQ9GZT3 RNY1P10-201ENST00000363268 113 ntBASIC0.46□□□□□ -2.34
SLIRPQ9GZT3 RNU6-961P-201ENST00000363893 105 ntBASIC0.46□□□□□ -2.34
SLIRPQ9GZT3 RNA5SP48-201ENST00000363969 126 ntBASIC0.46□□□□□ -2.34
SLIRPQ9GZT3 Y_RNA.516-201ENST00000384541 124 ntBASIC0.46□□□□□ -2.34
SLIRPQ9GZT3 SNORD89-201ENST00000390981 114 ntBASIC0.46□□□□□ -2.34
SLIRPQ9GZT3 SNORD115-47-201ENST00000391226 86 ntBASIC0.46□□□□□ -2.34
SLIRPQ9GZT3 AL031003.1-201ENST00000404229 172 ntBASIC0.46□□□□□ -2.34
SLIRPQ9GZT3 AC016907.1-201ENST00000419483 435 ntBASIC0.46□□□□□ -2.34
SLIRPQ9GZT3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.46□□□□□ -2.34
SLIRPQ9GZT3 AC107399.1-201ENST00000451226 265 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms