Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 U4.5-201ENST00000617137 123 ntBASIC0.52□□□□□ -2.33
SLIRPQ9GZT3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.52□□□□□ -2.33
SLIRPQ9GZT3 RNU6-1301P-201ENST00000362724 104 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 RNU6-392P-201ENST00000364926 101 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 SNORD12B-201ENST00000410433 91 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 AC004941.2-201ENST00000427009 228 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 AC098869.1-201ENST00000481627 292 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 RNU6-720P-201ENST00000516363 108 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 RNU6-1337P-201ENST00000516525 95 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 Y_RNA.708-201ENST00000516950 96 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 MIR2355-201ENST00000517199 87 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 MTND4LP26-201ENST00000518144 282 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 AC109810.1-201ENST00000534066 224 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 AC104984.5-201ENST00000586878 94 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 AC018638.8-201ENST00000588755 281 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 MIR3688-2-201ENST00000636963 87 ntBASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.51□□□□□ -2.33
SLIRPQ9GZT3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 MIR520C-201ENST00000385005 87 ntBASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 MIR136-201ENST00000385207 82 ntBASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 RNU6-510P-201ENST00000391239 108 ntBASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 AC092423.1-201ENST00000430165 186 ntBASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 RPL23AP50-201ENST00000434149 455 ntBASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 AC093534.1-201ENST00000504977 132 ntBASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 RNU7-41P-201ENST00000515917 61 ntBASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 RN7SKP164-201ENST00000516138 266 ntBASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 AC025627.3-201ENST00000582078 182 ntBASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 AL359821.1-201ENST00000605519 182 ntBASIC0.5□□□□□ -2.33
SLIRPQ9GZT3 AC023934.1-201ENST00000574529 2389 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 Y_RNA.339-201ENST00000365325 102 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 Y_RNA.436-201ENST00000384097 102 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 Y_RNA.453-201ENST00000384223 109 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 MIR15B-201ENST00000385045 98 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 MIR548F5-201ENST00000408421 86 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 Y_RNA.621-201ENST00000411065 96 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 RPS3AP52-201ENST00000435639 297 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 AC011604.1-201ENST00000545978 196 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 AC023827.1-201ENST00000569247 97 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 AC005899.2-201ENST00000584353 90 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 AL590095.2-201ENST00000604136 117 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 AC080013.6-201ENST00000606185 215 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 AC009229.3-201ENST00000608056 282 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 AC004467.1-201ENST00000615678 330 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 MIR6835-201ENST00000621552 64 ntBASIC0.49□□□□□ -2.33
SLIRPQ9GZT3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 SNORA25.3-201ENST00000363205 127 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 Y_RNA.482-201ENST00000384377 111 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 RNU6-601P-201ENST00000384540 107 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 MIR522-201ENST00000385071 87 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 MIR516B2-201ENST00000385190 85 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 RPL7P42-201ENST00000481005 679 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 RPL17P19-201ENST00000489069 552 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 HMGN1P7-201ENST00000491722 313 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 RNU6-408P-201ENST00000515910 100 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 SNORA25.10-201ENST00000515926 124 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 RNU6-1110P-201ENST00000516462 101 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 RNU7-43P-201ENST00000516554 64 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 AC022616.4-201ENST00000522985 181 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 MIR4764-201ENST00000580680 88 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 AC090517.2-201ENST00000614966 680 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 AC092794.2-201ENST00000620933 563 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 AL442644.1-201ENST00000454390 3105 ntBASIC0.48□□□□□ -2.33
SLIRPQ9GZT3 Y_RNA.3-201ENST00000362331 103 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 RNU6-623P-201ENST00000363143 105 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 SNORD114-27-201ENST00000363766 70 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 Y_RNA.253-201ENST00000364562 112 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 SNORD14.1-201ENST00000365609 90 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 Y_RNA.404-201ENST00000383978 102 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 RNU6-1297P-201ENST00000384415 104 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 SNORD99-201ENST00000408612 74 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 MTND3P8-201ENST00000412909 339 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 MTND3P10-201ENST00000450967 341 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 AC116353.2-201ENST00000505332 712 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 AC108729.3-201ENST00000513484 108 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 RNU11-2P-201ENST00000516898 142 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 AC055872.1-201ENST00000570978 278 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 MIR6715A-201ENST00000615929 79 ntBASIC0.47□□□□□ -2.33
SLIRPQ9GZT3 MIR373-201ENST00000362273 69 ntBASIC0.46□□□□□ -2.34
SLIRPQ9GZT3 RNY1P10-201ENST00000363268 113 ntBASIC0.46□□□□□ -2.34
SLIRPQ9GZT3 RNU6-961P-201ENST00000363893 105 ntBASIC0.46□□□□□ -2.34
SLIRPQ9GZT3 RNA5SP48-201ENST00000363969 126 ntBASIC0.46□□□□□ -2.34
SLIRPQ9GZT3 Y_RNA.516-201ENST00000384541 124 ntBASIC0.46□□□□□ -2.34
SLIRPQ9GZT3 SNORD89-201ENST00000390981 114 ntBASIC0.46□□□□□ -2.34
SLIRPQ9GZT3 SNORD115-47-201ENST00000391226 86 ntBASIC0.46□□□□□ -2.34
SLIRPQ9GZT3 AL031003.1-201ENST00000404229 172 ntBASIC0.46□□□□□ -2.34
SLIRPQ9GZT3 AC016907.1-201ENST00000419483 435 ntBASIC0.46□□□□□ -2.34
SLIRPQ9GZT3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.46□□□□□ -2.34
SLIRPQ9GZT3 AC107399.1-201ENST00000451226 265 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms