Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 MIR101-1-201ENST00000362265 75 ntBASIC-0.12□□□□□ -2.43
UPF3BQ9BZI7 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
UPF3BQ9BZI7 AL590002.1-201ENST00000406554 418 ntBASIC-0.12□□□□□ -2.43
UPF3BQ9BZI7 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-0.12□□□□□ -2.43
UPF3BQ9BZI7 CYCSP46-201ENST00000423569 204 ntBASIC-0.12□□□□□ -2.43
UPF3BQ9BZI7 MTCO1P20-201ENST00000425366 358 ntBASIC-0.12□□□□□ -2.43
UPF3BQ9BZI7 MTCO2P16-201ENST00000436962 677 ntBASIC-0.12□□□□□ -2.43
UPF3BQ9BZI7 SUMO1P2-201ENST00000452524 304 ntBASIC-0.12□□□□□ -2.43
UPF3BQ9BZI7 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-0.12□□□□□ -2.43
UPF3BQ9BZI7 AC018710.1-201ENST00000506509 158 ntBASIC-0.12□□□□□ -2.43
UPF3BQ9BZI7 SNORA18.7-201ENST00000516910 131 ntBASIC-0.12□□□□□ -2.43
UPF3BQ9BZI7 AL357078.3-201ENST00000607528 618 ntBASIC-0.12□□□□□ -2.43
UPF3BQ9BZI7 AC072046.2-201ENST00000618366 268 ntBASIC-0.12□□□□□ -2.43
UPF3BQ9BZI7 SNORD95.1-201ENST00000364099 68 ntBASIC-0.13□□□□□ -2.43
UPF3BQ9BZI7 RNU6-580P-201ENST00000365159 107 ntBASIC-0.13□□□□□ -2.43
UPF3BQ9BZI7 RNU6-407P-201ENST00000365280 104 ntBASIC-0.13□□□□□ -2.43
UPF3BQ9BZI7 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.13□□□□□ -2.43
UPF3BQ9BZI7 RNU6-541P-201ENST00000384709 110 ntBASIC-0.13□□□□□ -2.43
UPF3BQ9BZI7 RNU6-679P-201ENST00000391003 106 ntBASIC-0.13□□□□□ -2.43
UPF3BQ9BZI7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.13□□□□□ -2.43
UPF3BQ9BZI7 AL590632.1-201ENST00000424289 371 ntBASIC-0.13□□□□□ -2.43
UPF3BQ9BZI7 MRPS10P2-201ENST00000431226 381 ntBASIC-0.13□□□□□ -2.43
UPF3BQ9BZI7 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.13□□□□□ -2.43
UPF3BQ9BZI7 MIR3913-1-201ENST00000577744 102 ntBASIC-0.13□□□□□ -2.43
UPF3BQ9BZI7 MIR4290-201ENST00000583807 95 ntBASIC-0.13□□□□□ -2.43
UPF3BQ9BZI7 AC009248.2-201ENST00000619826 254 ntBASIC-0.13□□□□□ -2.43
UPF3BQ9BZI7 AC022306.3-201ENST00000619930 550 ntBASIC-0.13□□□□□ -2.43
UPF3BQ9BZI7 FGF7P2-201ENST00000332473 296 ntBASIC-0.14□□□□□ -2.43
UPF3BQ9BZI7 MIR377-201ENST00000362145 69 ntBASIC-0.14□□□□□ -2.43
UPF3BQ9BZI7 SNORD68-201ENST00000363214 84 ntBASIC-0.14□□□□□ -2.43
UPF3BQ9BZI7 RNA5SP214-201ENST00000363378 118 ntBASIC-0.14□□□□□ -2.43
UPF3BQ9BZI7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.14□□□□□ -2.43
UPF3BQ9BZI7 AL353572.1-201ENST00000442490 417 ntBASIC-0.14□□□□□ -2.43
UPF3BQ9BZI7 AC104692.1-201ENST00000472406 90 ntBASIC-0.14□□□□□ -2.43
UPF3BQ9BZI7 AC116353.2-201ENST00000505332 712 ntBASIC-0.14□□□□□ -2.43
UPF3BQ9BZI7 AC109347.2-201ENST00000610220 349 ntBASIC-0.14□□□□□ -2.43
UPF3BQ9BZI7 uc_338.16-201ENST00000621804 95 ntBASIC-0.14□□□□□ -2.43
UPF3BQ9BZI7 AC127459.3-201ENST00000624328 466 ntBASIC-0.14□□□□□ -2.43
UPF3BQ9BZI7 SNORD118-201ENST00000363593 134 ntBASIC-0.15□□□□□ -2.43
UPF3BQ9BZI7 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.15□□□□□ -2.43
UPF3BQ9BZI7 MT-TN-201ENST00000387400 73 ntBASIC-0.15□□□□□ -2.43
UPF3BQ9BZI7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.15□□□□□ -2.43
UPF3BQ9BZI7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.15□□□□□ -2.43
UPF3BQ9BZI7 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.15□□□□□ -2.43
UPF3BQ9BZI7 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.15□□□□□ -2.43
UPF3BQ9BZI7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.15□□□□□ -2.43
UPF3BQ9BZI7 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.15□□□□□ -2.43
UPF3BQ9BZI7 RNU6-107P-201ENST00000516643 102 ntBASIC-0.15□□□□□ -2.43
UPF3BQ9BZI7 UBL5P4-201ENST00000562584 236 ntBASIC-0.15□□□□□ -2.43
UPF3BQ9BZI7 AL158211.1-201ENST00000566763 763 ntBASIC-0.15□□□□□ -2.43
UPF3BQ9BZI7 AL136370.1-201ENST00000608166 691 ntBASIC-0.15□□□□□ -2.43
UPF3BQ9BZI7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.15□□□□□ -2.43
UPF3BQ9BZI7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.15□□□□□ -2.43
UPF3BQ9BZI7 MIR4251-201ENST00000635819 61 ntBASIC-0.15□□□□□ -2.43
UPF3BQ9BZI7 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.16□□□□□ -2.44
UPF3BQ9BZI7 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.16□□□□□ -2.44
UPF3BQ9BZI7 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.16□□□□□ -2.44
UPF3BQ9BZI7 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.16□□□□□ -2.44
UPF3BQ9BZI7 Y_RNA.560-201ENST00000384689 102 ntBASIC-0.16□□□□□ -2.44
UPF3BQ9BZI7 AL139396.1-201ENST00000421137 167 ntBASIC-0.16□□□□□ -2.44
UPF3BQ9BZI7 RPS29P8-201ENST00000445109 171 ntBASIC-0.16□□□□□ -2.44
UPF3BQ9BZI7 SNORD123-201ENST00000459473 70 ntBASIC-0.16□□□□□ -2.44
UPF3BQ9BZI7 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.16□□□□□ -2.44
UPF3BQ9BZI7 AC112693.2-201ENST00000556538 232 ntBASIC-0.16□□□□□ -2.44
UPF3BQ9BZI7 AC092747.3-201ENST00000603769 301 ntBASIC-0.16□□□□□ -2.44
UPF3BQ9BZI7 SNORA25.18-201ENST00000607153 114 ntBASIC-0.16□□□□□ -2.44
UPF3BQ9BZI7 AF250324.2-201ENST00000608299 610 ntBASIC-0.16□□□□□ -2.44
UPF3BQ9BZI7 AL121757.2-201ENST00000611223 313 ntBASIC-0.16□□□□□ -2.44
UPF3BQ9BZI7 AC104260.1-201ENST00000616660 539 ntBASIC-0.16□□□□□ -2.44
UPF3BQ9BZI7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.16□□□□□ -2.44
UPF3BQ9BZI7 RNU6-396P-201ENST00000365369 105 ntBASIC-0.17□□□□□ -2.44
UPF3BQ9BZI7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.17□□□□□ -2.44
UPF3BQ9BZI7 HMGN2P22-201ENST00000427588 175 ntBASIC-0.17□□□□□ -2.44
UPF3BQ9BZI7 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.17□□□□□ -2.44
UPF3BQ9BZI7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.17□□□□□ -2.44
UPF3BQ9BZI7 AC046134.1-201ENST00000514454 666 ntBASIC-0.17□□□□□ -2.44
UPF3BQ9BZI7 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.17□□□□□ -2.44
UPF3BQ9BZI7 SNORA19.2-201ENST00000516013 114 ntBASIC-0.17□□□□□ -2.44
UPF3BQ9BZI7 RNU6-977P-201ENST00000516411 103 ntBASIC-0.17□□□□□ -2.44
UPF3BQ9BZI7 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.17□□□□□ -2.44
UPF3BQ9BZI7 RNA5SP94-201ENST00000516917 108 ntBASIC-0.17□□□□□ -2.44
UPF3BQ9BZI7 AL355375.2-201ENST00000574825 175 ntBASIC-0.17□□□□□ -2.44
UPF3BQ9BZI7 MIR548AO-201ENST00000579992 96 ntBASIC-0.17□□□□□ -2.44
UPF3BQ9BZI7 AC005828.6-201ENST00000606610 232 ntBASIC-0.17□□□□□ -2.44
UPF3BQ9BZI7 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.17□□□□□ -2.44
UPF3BQ9BZI7 AC079248.2-201ENST00000623779 326 ntBASIC-0.17□□□□□ -2.44
UPF3BQ9BZI7 MIR873-201ENST00000401120 77 ntBASIC-0.18□□□□□ -2.44
UPF3BQ9BZI7 AC134698.4-201ENST00000523451 826 ntBASIC-0.18□□□□□ -2.44
UPF3BQ9BZI7 AC012433.1-201ENST00000588916 398 ntBASIC-0.18□□□□□ -2.44
UPF3BQ9BZI7 AC104408.1-201ENST00000605241 170 ntBASIC-0.18□□□□□ -2.44
UPF3BQ9BZI7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
UPF3BQ9BZI7 SNORD114-28-201ENST00000363610 72 ntBASIC-0.19□□□□□ -2.44
UPF3BQ9BZI7 RNA5SP266-201ENST00000410273 108 ntBASIC-0.19□□□□□ -2.44
UPF3BQ9BZI7 RNU6-584P-201ENST00000410350 95 ntBASIC-0.19□□□□□ -2.44
UPF3BQ9BZI7 RNA5SP451-201ENST00000410588 110 ntBASIC-0.19□□□□□ -2.44
UPF3BQ9BZI7 RPL30P16-201ENST00000419341 429 ntBASIC-0.19□□□□□ -2.44
UPF3BQ9BZI7 MTCO2P30-201ENST00000503662 364 ntBASIC-0.19□□□□□ -2.44
UPF3BQ9BZI7 AL591926.4-201ENST00000616895 298 ntBASIC-0.19□□□□□ -2.44
UPF3BQ9BZI7 AC073534.2-201ENST00000620377 381 ntBASIC-0.19□□□□□ -2.44
UPF3BQ9BZI7 MIR410-201ENST00000362222 80 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms