Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 AC113195.1-201ENST00000579952 141 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 MIR4422-201ENST00000581938 83 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 AL353621.2-201ENST00000605340 133 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 AL121655.1-201ENST00000605811 308 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 AC007742.2-201ENST00000618226 398 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 AC130454.1-201ENST00000622948 401 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 MIR338-201ENST00000636369 67 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 MIR3674-201ENST00000636576 68 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 U6.108-201ENST00000637764 58 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 MIR26B-201ENST00000362251 77 ntBASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 SNORD81.1-201ENST00000363064 77 ntBASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.424-201ENST00000384063 103 ntBASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.455-201ENST00000384230 98 ntBASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 RNU6-937P-201ENST00000384325 106 ntBASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 RNU6-417P-201ENST00000384712 107 ntBASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 RNA5SP467-201ENST00000391274 118 ntBASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 AC098869.1-201ENST00000481627 292 ntBASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 RNU6-897P-201ENST00000517135 105 ntBASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 RNU2-12P-201ENST00000517216 168 ntBASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 AC022616.4-201ENST00000522985 181 ntBASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 MIR4423-201ENST00000580922 80 ntBASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 RPS29P30-201ENST00000600975 111 ntBASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.812-201ENST00000610788 101 ntBASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.784-201ENST00000613803 101 ntBASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.787-201ENST00000616522 101 ntBASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.780-201ENST00000617336 101 ntBASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.801-201ENST00000619005 101 ntBASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 U6.115-201ENST00000636045 103 ntBASIC1.11□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.124-201ENST00000363339 93 ntBASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.243-201ENST00000364481 109 ntBASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.286-201ENST00000364813 102 ntBASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 SNORD114-22-201ENST00000365423 72 ntBASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 SNORA20B-201ENST00000384220 132 ntBASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.551-201ENST00000384661 102 ntBASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 MIR606-201ENST00000384851 96 ntBASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 MIR1252-201ENST00000408861 65 ntBASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 RNA5SP475-201ENST00000410568 110 ntBASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 TOMM22P2-201ENST00000430735 237 ntBASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 AC005002.2-201ENST00000438228 269 ntBASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 MTATP8P1-201ENST00000467115 207 ntBASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 AC114982.1-201ENST00000469402 321 ntBASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 AC099513.1-201ENST00000490423 301 ntBASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 RNU6-764P-201ENST00000516396 105 ntBASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 RNU2-34P-201ENST00000516534 121 ntBASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 RNU7-128P-201ENST00000517247 62 ntBASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 SUMO2P18-201ENST00000518873 252 ntBASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 AC027419.1-201ENST00000522976 328 ntBASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 MIR4719-201ENST00000585233 84 ntBASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 AL390123.1-201ENST00000603216 237 ntBASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 AL138825.1-201ENST00000618587 192 ntBASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
RSPO3Q9BXY4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.64-201ENST00000362845 102 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 SNORD115-30-201ENST00000364117 82 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 RNY1-201ENST00000364228 113 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.222-201ENST00000364264 102 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 RNU4-50P-201ENST00000364361 141 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 RNU6-1240P-201ENST00000365155 104 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 RNU6-639P-201ENST00000384074 107 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.439-201ENST00000384119 94 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.446-201ENST00000384178 104 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 RNU6-738P-201ENST00000384531 106 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 RNU6-1160P-201ENST00000384546 104 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.570-201ENST00000384750 101 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 MIR215-201ENST00000384858 110 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 SNORA48.1-201ENST00000390879 135 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 RNU4-30P-201ENST00000410245 143 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 RNU6-101P-201ENST00000410323 104 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 AC245047.4-201ENST00000433189 144 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 ATP5J2P3-201ENST00000451550 258 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 AC131281.1-201ENST00000522984 164 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 MIR5094-201ENST00000578766 85 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 AC005176.2-201ENST00000596933 147 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 AC010900.2-201ENST00000604508 210 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 AP001485.1-201ENST00000604799 199 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 AC022441.3-201ENST00000605737 136 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 AC005828.6-201ENST00000606610 232 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 AL353149.1-201ENST00000610667 244 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 AC091895.1-201ENST00000624494 256 ntBASIC1.09□□□□□ -2.23
RSPO3Q9BXY4 snoU2-30.2-201ENST00000362805 70 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 SNORA63-201ENST00000363450 132 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 SNORD114-26-201ENST00000363543 72 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.172-201ENST00000363765 102 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.210-201ENST00000364161 110 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 RNU1-96P-201ENST00000364163 162 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 RNU6-1175P-201ENST00000365200 107 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 RNU6-53P-201ENST00000365367 106 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.361-201ENST00000365515 120 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 RNU6-102P-201ENST00000384485 104 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms