Protein–RNA interactions for Protein: Q99966

CITED1, Cbp/p300-interacting transactivator 1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1Q99966 MIR520G-201ENST00000385064 90 ntBASIC1.02□□□□□ -2.25
CITED1Q99966 RNA5SP482-201ENST00000391269 118 ntBASIC1.02□□□□□ -2.25
CITED1Q99966 U8.16-201ENST00000391279 133 ntBASIC1.02□□□□□ -2.25
CITED1Q99966 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.02□□□□□ -2.25
CITED1Q99966 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
CITED1Q99966 DYNLT3P2-201ENST00000442517 295 ntBASIC1.02□□□□□ -2.25
CITED1Q99966 AL049830.1-201ENST00000468034 425 ntBASIC1.02□□□□□ -2.25
CITED1Q99966 AC004223.1-201ENST00000479840 271 ntBASIC1.02□□□□□ -2.25
CITED1Q99966 AC105758.1-201ENST00000506038 399 ntBASIC1.02□□□□□ -2.25
CITED1Q99966 PRDX4P1-201ENST00000507189 574 ntBASIC1.02□□□□□ -2.25
CITED1Q99966 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.02□□□□□ -2.25
CITED1Q99966 AC091178.2-201ENST00000584401 117 ntBASIC1.02□□□□□ -2.25
CITED1Q99966 AL022345.2-201ENST00000606307 135 ntBASIC1.02□□□□□ -2.25
CITED1Q99966 BX284668.6-201ENST00000606899 438 ntBASIC1.02□□□□□ -2.25
CITED1Q99966 AC122108.2-201ENST00000611946 526 ntBASIC1.02□□□□□ -2.25
CITED1Q99966 AC022709.1-201ENST00000615967 87 ntBASIC1.02□□□□□ -2.25
CITED1Q99966 AC087588.2-201ENST00000617667 426 ntBASIC1.02□□□□□ -2.25
CITED1Q99966 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.02□□□□□ -2.25
CITED1Q99966 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.02□□□□□ -2.25
CITED1Q99966 Y_RNA.243-201ENST00000364481 109 ntBASIC1.01□□□□□ -2.25
CITED1Q99966 Y_RNA.314-201ENST00000365114 102 ntBASIC1.01□□□□□ -2.25
CITED1Q99966 RNU6-424P-201ENST00000384367 105 ntBASIC1.01□□□□□ -2.25
CITED1Q99966 AC138393.2-201ENST00000414742 246 ntBASIC1.01□□□□□ -2.25
CITED1Q99966 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.01□□□□□ -2.25
CITED1Q99966 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.01□□□□□ -2.25
CITED1Q99966 FCF1P4-201ENST00000448326 183 ntBASIC1.01□□□□□ -2.25
CITED1Q99966 HSPE1P13-201ENST00000451143 297 ntBASIC1.01□□□□□ -2.25
CITED1Q99966 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.01□□□□□ -2.25
CITED1Q99966 COX6CP14-201ENST00000469580 174 ntBASIC1.01□□□□□ -2.25
CITED1Q99966 RNU6-322P-201ENST00000516010 103 ntBASIC1.01□□□□□ -2.25
CITED1Q99966 RN7SKP179-201ENST00000516126 217 ntBASIC1.01□□□□□ -2.25
CITED1Q99966 RNA5SP61-201ENST00000516453 100 ntBASIC1.01□□□□□ -2.25
CITED1Q99966 RNU6-63P-201ENST00000516690 95 ntBASIC1.01□□□□□ -2.25
CITED1Q99966 RNU6-1096P-201ENST00000517089 102 ntBASIC1.01□□□□□ -2.25
CITED1Q99966 GHRLOS.1-201ENST00000610995 70 ntBASIC1.01□□□□□ -2.25
CITED1Q99966 AC025253.1-201ENST00000613623 543 ntBASIC1.01□□□□□ -2.25
CITED1Q99966 AC005592.1-201ENST00000566527 1640 ntBASIC1□□□□□ -2.25
CITED1Q99966 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CITED1Q99966 AC091812.1-201ENST00000432235 1948 ntBASIC1□□□□□ -2.25
CITED1Q99966 RNU6-1297P-201ENST00000384415 104 ntBASIC1□□□□□ -2.25
CITED1Q99966 MIR628-201ENST00000385229 95 ntBASIC1□□□□□ -2.25
CITED1Q99966 AL451046.2-201ENST00000403074 277 ntBASIC1□□□□□ -2.25
CITED1Q99966 CEP57L1P1-201ENST00000430943 1201 ntBASIC1□□□□□ -2.25
CITED1Q99966 AC015922.2-201ENST00000435593 184 ntBASIC1□□□□□ -2.25
CITED1Q99966 AC093850.1-201ENST00000454121 251 ntBASIC1□□□□□ -2.25
CITED1Q99966 OR9P1P-201ENST00000496431 281 ntBASIC1□□□□□ -2.25
CITED1Q99966 SNORA70.12-201ENST00000516084 153 ntBASIC1□□□□□ -2.25
CITED1Q99966 RNU6-947P-201ENST00000516264 106 ntBASIC1□□□□□ -2.25
CITED1Q99966 RNA5SP480-201ENST00000516840 109 ntBASIC1□□□□□ -2.25
CITED1Q99966 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1□□□□□ -2.25
CITED1Q99966 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1□□□□□ -2.25
CITED1Q99966 AC005828.6-201ENST00000606610 232 ntBASIC1□□□□□ -2.25
CITED1Q99966 AL355073.2-201ENST00000612106 557 ntBASIC1□□□□□ -2.25
CITED1Q99966 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1□□□□□ -2.25
CITED1Q99966 AC099654.14-201ENST00000638599 341 ntBASIC1□□□□□ -2.25
CITED1Q99966 SNORD114-7-201ENST00000362520 77 ntBASIC0.99□□□□□ -2.25
CITED1Q99966 Y_RNA.142-201ENST00000363491 102 ntBASIC0.99□□□□□ -2.25
CITED1Q99966 RNU6-961P-201ENST00000363893 105 ntBASIC0.99□□□□□ -2.25
CITED1Q99966 RNY3P11-201ENST00000364153 102 ntBASIC0.99□□□□□ -2.25
CITED1Q99966 Y_RNA.384-201ENST00000383909 102 ntBASIC0.99□□□□□ -2.25
CITED1Q99966 MIR222-201ENST00000384992 110 ntBASIC0.99□□□□□ -2.25
CITED1Q99966 Y_RNA.621-201ENST00000411065 96 ntBASIC0.99□□□□□ -2.25
CITED1Q99966 MTCO3P10-201ENST00000455912 772 ntBASIC0.99□□□□□ -2.25
CITED1Q99966 SNORA20.3-201ENST00000516880 132 ntBASIC0.99□□□□□ -2.25
CITED1Q99966 RNU6-165P-201ENST00000517170 99 ntBASIC0.99□□□□□ -2.25
CITED1Q99966 AC090049.2-201ENST00000550377 109 ntBASIC0.99□□□□□ -2.25
CITED1Q99966 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.99□□□□□ -2.25
CITED1Q99966 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CITED1Q99966 RNU6-324P-201ENST00000363957 106 ntBASIC0.98□□□□□ -2.25
CITED1Q99966 Y_RNA.259-201ENST00000364619 101 ntBASIC0.98□□□□□ -2.25
CITED1Q99966 RNU6-117P-201ENST00000365415 107 ntBASIC0.98□□□□□ -2.25
CITED1Q99966 Y_RNA.354-201ENST00000365448 111 ntBASIC0.98□□□□□ -2.25
CITED1Q99966 Y_RNA.387-201ENST00000383918 102 ntBASIC0.98□□□□□ -2.25
CITED1Q99966 Y_RNA.474-201ENST00000384341 102 ntBASIC0.98□□□□□ -2.25
CITED1Q99966 MIR520E-201ENST00000384867 87 ntBASIC0.98□□□□□ -2.25
CITED1Q99966 MIR653-201ENST00000385279 96 ntBASIC0.98□□□□□ -2.25
CITED1Q99966 RNA5SP511-201ENST00000410487 115 ntBASIC0.98□□□□□ -2.25
CITED1Q99966 RNU5A-5P-201ENST00000411054 116 ntBASIC0.98□□□□□ -2.25
CITED1Q99966 ELOCP24-201ENST00000456370 334 ntBASIC0.98□□□□□ -2.25
CITED1Q99966 SNORA70.22-201ENST00000517160 124 ntBASIC0.98□□□□□ -2.25
CITED1Q99966 MTND4LP32-201ENST00000636111 270 ntBASIC0.98□□□□□ -2.25
CITED1Q99966 RNU6-626P-201ENST00000363354 107 ntBASIC0.97□□□□□ -2.25
CITED1Q99966 SNORA2.2-201ENST00000365473 135 ntBASIC0.97□□□□□ -2.25
CITED1Q99966 SNORA22-201ENST00000383907 134 ntBASIC0.97□□□□□ -2.25
CITED1Q99966 RNU6-1080P-201ENST00000383982 107 ntBASIC0.97□□□□□ -2.25
CITED1Q99966 RNY3P4-201ENST00000384428 101 ntBASIC0.97□□□□□ -2.25
CITED1Q99966 SNORA22C-201ENST00000384614 134 ntBASIC0.97□□□□□ -2.25
CITED1Q99966 MIR19B1-201ENST00000384829 87 ntBASIC0.97□□□□□ -2.25
CITED1Q99966 SNORD78.2-201ENST00000391076 69 ntBASIC0.97□□□□□ -2.25
CITED1Q99966 AC099799.1-201ENST00000439809 192 ntBASIC0.97□□□□□ -2.25
CITED1Q99966 UBL5P1-201ENST00000507979 193 ntBASIC0.97□□□□□ -2.25
CITED1Q99966 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.97□□□□□ -2.25
CITED1Q99966 RNU2-12P-201ENST00000517216 168 ntBASIC0.97□□□□□ -2.25
CITED1Q99966 AL358944.1-201ENST00000528537 144 ntBASIC0.97□□□□□ -2.25
CITED1Q99966 FAM106DP-201ENST00000586416 501 ntBASIC0.97□□□□□ -2.25
CITED1Q99966 AC005176.2-201ENST00000596933 147 ntBASIC0.97□□□□□ -2.25
CITED1Q99966 U2.1-201ENST00000618978 145 ntBASIC0.97□□□□□ -2.25
CITED1Q99966 MIR6515-201ENST00000619843 57 ntBASIC0.97□□□□□ -2.25
CITED1Q99966 RNU6-490P-201ENST00000362985 107 ntBASIC0.96□□□□□ -2.26
CITED1Q99966 SNORD115-30-201ENST00000364117 82 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms