Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 Y_RNA.197-201ENST00000364004 102 ntBASIC1.04□□□□□ -2.24
SCN2AQ99250 RNU1-115P-201ENST00000365329 160 ntBASIC1.04□□□□□ -2.24
SCN2AQ99250 Y_RNA.368-201ENST00000365547 113 ntBASIC1.04□□□□□ -2.24
SCN2AQ99250 SNORD42.2-201ENST00000365570 69 ntBASIC1.04□□□□□ -2.24
SCN2AQ99250 RNU6-296P-201ENST00000384608 107 ntBASIC1.04□□□□□ -2.24
SCN2AQ99250 MCFD2P1-201ENST00000417812 300 ntBASIC1.04□□□□□ -2.24
SCN2AQ99250 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.04□□□□□ -2.24
SCN2AQ99250 AC004223.1-201ENST00000479840 271 ntBASIC1.04□□□□□ -2.24
SCN2AQ99250 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.04□□□□□ -2.24
SCN2AQ99250 RNU7-172P-201ENST00000517125 64 ntBASIC1.04□□□□□ -2.24
SCN2AQ99250 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.04□□□□□ -2.24
SCN2AQ99250 MIR5701-3-201ENST00000578890 82 ntBASIC1.04□□□□□ -2.24
SCN2AQ99250 MIR5701-1-201ENST00000585138 82 ntBASIC1.04□□□□□ -2.24
SCN2AQ99250 AC125232.2-201ENST00000592457 143 ntBASIC1.04□□□□□ -2.24
SCN2AQ99250 AL121655.1-201ENST00000605811 308 ntBASIC1.04□□□□□ -2.24
SCN2AQ99250 MIR5701-2-201ENST00000615634 82 ntBASIC1.04□□□□□ -2.24
SCN2AQ99250 U2.1-201ENST00000618978 145 ntBASIC1.04□□□□□ -2.24
SCN2AQ99250 AL121890.5-201ENST00000620848 304 ntBASIC1.04□□□□□ -2.24
SCN2AQ99250 U6.115-201ENST00000636045 103 ntBASIC1.04□□□□□ -2.24
SCN2AQ99250 MTND4P29-201ENST00000503122 1372 ntBASIC1.03□□□□□ -2.24
SCN2AQ99250 SNORD33-201ENST00000362761 85 ntBASIC1.03□□□□□ -2.24
SCN2AQ99250 Y_RNA.58-201ENST00000362807 102 ntBASIC1.03□□□□□ -2.24
SCN2AQ99250 Y_RNA.70-201ENST00000362886 110 ntBASIC1.03□□□□□ -2.24
SCN2AQ99250 Y_RNA.154-201ENST00000363624 102 ntBASIC1.03□□□□□ -2.24
SCN2AQ99250 SNORA25.8-201ENST00000364831 128 ntBASIC1.03□□□□□ -2.24
SCN2AQ99250 RNY3P1-201ENST00000365085 102 ntBASIC1.03□□□□□ -2.24
SCN2AQ99250 RNY3-201ENST00000365484 102 ntBASIC1.03□□□□□ -2.24
SCN2AQ99250 SNORA63.7-201ENST00000365579 123 ntBASIC1.03□□□□□ -2.24
SCN2AQ99250 HSPE1P9-201ENST00000440046 311 ntBASIC1.03□□□□□ -2.24
SCN2AQ99250 AC073910.1-201ENST00000445047 438 ntBASIC1.03□□□□□ -2.24
SCN2AQ99250 RPL30P15-201ENST00000457129 321 ntBASIC1.03□□□□□ -2.24
SCN2AQ99250 SNORD19B-201ENST00000459623 84 ntBASIC1.03□□□□□ -2.24
SCN2AQ99250 AL358944.1-201ENST00000528537 144 ntBASIC1.03□□□□□ -2.24
SCN2AQ99250 AP002004.2-201ENST00000531656 154 ntBASIC1.03□□□□□ -2.24
SCN2AQ99250 MIRLET7C-201ENST00000362160 84 ntBASIC1.03□□□□□ -2.25
SCN2AQ99250 RNU6-1266P-201ENST00000362794 105 ntBASIC1.03□□□□□ -2.25
SCN2AQ99250 RNU6-1310P-201ENST00000384153 107 ntBASIC1.03□□□□□ -2.25
SCN2AQ99250 Y_RNA.458-201ENST00000384240 102 ntBASIC1.03□□□□□ -2.25
SCN2AQ99250 RNA5SP482-201ENST00000391269 118 ntBASIC1.03□□□□□ -2.25
SCN2AQ99250 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.03□□□□□ -2.25
SCN2AQ99250 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.03□□□□□ -2.25
SCN2AQ99250 AC005042.3-201ENST00000453230 174 ntBASIC1.03□□□□□ -2.25
SCN2AQ99250 SNORA25.10-201ENST00000515926 124 ntBASIC1.03□□□□□ -2.25
SCN2AQ99250 RNA5SP20-201ENST00000515976 84 ntBASIC1.03□□□□□ -2.25
SCN2AQ99250 RNU2-12P-201ENST00000517216 168 ntBASIC1.03□□□□□ -2.25
SCN2AQ99250 AC022868.1-201ENST00000517767 391 ntBASIC1.03□□□□□ -2.25
SCN2AQ99250 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.03□□□□□ -2.25
SCN2AQ99250 uc_338.22-201ENST00000622722 187 ntBASIC1.03□□□□□ -2.25
SCN2AQ99250 MIR1302-1-201ENST00000637932 143 ntBASIC1.03□□□□□ -2.25
SCN2AQ99250 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
SCN2AQ99250 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SCN2AQ99250 MIR424-201ENST00000362227 98 ntBASIC1.02□□□□□ -2.25
SCN2AQ99250 SNORA1B-201ENST00000362535 133 ntBASIC1.02□□□□□ -2.25
SCN2AQ99250 RNU6-117P-201ENST00000365415 107 ntBASIC1.02□□□□□ -2.25
SCN2AQ99250 Y_RNA.384-201ENST00000383909 102 ntBASIC1.02□□□□□ -2.25
SCN2AQ99250 MRPL42P3-201ENST00000401492 326 ntBASIC1.02□□□□□ -2.25
SCN2AQ99250 RNU6-1054P-201ENST00000411293 104 ntBASIC1.02□□□□□ -2.25
SCN2AQ99250 AC092423.1-201ENST00000430165 186 ntBASIC1.02□□□□□ -2.25
SCN2AQ99250 AC040926.1-201ENST00000530195 238 ntBASIC1.02□□□□□ -2.25
SCN2AQ99250 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.02□□□□□ -2.25
SCN2AQ99250 MIR5000-201ENST00000577717 103 ntBASIC1.02□□□□□ -2.25
SCN2AQ99250 AL390123.1-201ENST00000603216 237 ntBASIC1.02□□□□□ -2.25
SCN2AQ99250 AC084781.2-201ENST00000615568 161 ntBASIC1.02□□□□□ -2.25
SCN2AQ99250 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SCN2AQ99250 RNY1-201ENST00000364228 113 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 Y_RNA.263-201ENST00000364659 114 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 SNORD116-13-201ENST00000384408 92 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 Y_RNA.570-201ENST00000384750 101 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 Y_RNA.645-201ENST00000391229 102 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 RN7SKP200-201ENST00000410564 320 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 AL161935.2-201ENST00000414627 60 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 MTCO3P19-201ENST00000415864 321 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 RPL30P13-201ENST00000418873 348 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 Y_RNA.631-201ENST00000459607 101 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.01□□□□□ -2.25
SCN2AQ99250 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.01□□□□□ -2.25
SCN2AQ99250 AC005972.2-201ENST00000604690 348 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 AC005014.2-201ENST00000607795 599 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 RNU6-1123P-201ENST00000362347 106 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 SNORD68-201ENST00000363214 84 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 Y_RNA.124-201ENST00000363339 93 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 RNU6-1297P-201ENST00000384415 104 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 RNU6-1105P-201ENST00000384774 107 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 AL031003.1-201ENST00000404229 172 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 RNU6-107P-201ENST00000516643 102 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 Y_RNA.713-201ENST00000517013 96 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 SNORD114-21-201ENST00000606412 72 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 MIR6078-201ENST00000611069 100 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 AL513423.1-201ENST00000621695 132 ntBASIC1.01□□□□□ -2.25
SCN2AQ99250 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1□□□□□ -2.25
SCN2AQ99250 RNU6-271P-201ENST00000363858 105 ntBASIC1□□□□□ -2.25
SCN2AQ99250 MIR598-201ENST00000384868 97 ntBASIC1□□□□□ -2.25
SCN2AQ99250 RPEP5-201ENST00000441137 268 ntBASIC1□□□□□ -2.25
SCN2AQ99250 RNU6-1337P-201ENST00000516525 95 ntBASIC1□□□□□ -2.25
SCN2AQ99250 RNU6-165P-201ENST00000517170 99 ntBASIC1□□□□□ -2.25
SCN2AQ99250 AC027419.1-201ENST00000522976 328 ntBASIC1□□□□□ -2.25
SCN2AQ99250 AL512310.8-201ENST00000550183 120 ntBASIC1□□□□□ -2.25
SCN2AQ99250 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms