Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MIR4282-201ENST00000583613 67 ntBASIC2.19□□□□□ -2.06
VPS50Q96JG6 AC011921.3-201ENST00000605540 361 ntBASIC2.19□□□□□ -2.06
VPS50Q96JG6 AC004832.4-201ENST00000608952 331 ntBASIC2.19□□□□□ -2.06
VPS50Q96JG6 U6.108-201ENST00000637764 58 ntBASIC2.19□□□□□ -2.06
VPS50Q96JG6 CENPCP1-201ENST00000533085 2578 ntBASIC2.19□□□□□ -2.06
VPS50Q96JG6 AC092881.1-201ENST00000638218 2733 ntBASIC2.18□□□□□ -2.06
VPS50Q96JG6 Y_RNA.82-201ENST00000363000 102 ntBASIC2.18□□□□□ -2.06
VPS50Q96JG6 Y_RNA.92-201ENST00000363043 102 ntBASIC2.18□□□□□ -2.06
VPS50Q96JG6 Y_RNA.235-201ENST00000364412 102 ntBASIC2.18□□□□□ -2.06
VPS50Q96JG6 Y_RNA.306-201ENST00000365015 102 ntBASIC2.18□□□□□ -2.06
VPS50Q96JG6 Y_RNA.312-201ENST00000365089 102 ntBASIC2.18□□□□□ -2.06
VPS50Q96JG6 Y_RNA.322-201ENST00000365151 102 ntBASIC2.18□□□□□ -2.06
VPS50Q96JG6 RNU6-211P-201ENST00000384047 107 ntBASIC2.18□□□□□ -2.06
VPS50Q96JG6 MIR29C-201ENST00000385231 88 ntBASIC2.18□□□□□ -2.06
VPS50Q96JG6 RNU6-1248P-201ENST00000391096 64 ntBASIC2.18□□□□□ -2.06
VPS50Q96JG6 RNU11-3P-201ENST00000391111 133 ntBASIC2.18□□□□□ -2.06
VPS50Q96JG6 EBAG9P1-201ENST00000418955 543 ntBASIC2.18□□□□□ -2.06
VPS50Q96JG6 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.18□□□□□ -2.06
VPS50Q96JG6 HSPE1P13-201ENST00000451143 297 ntBASIC2.18□□□□□ -2.06
VPS50Q96JG6 SNORD2.1-201ENST00000458762 69 ntBASIC2.18□□□□□ -2.06
VPS50Q96JG6 Y_RNA.650-201ENST00000459002 102 ntBASIC2.18□□□□□ -2.06
VPS50Q96JG6 Y_RNA.679-201ENST00000516416 91 ntBASIC2.18□□□□□ -2.06
VPS50Q96JG6 Y_RNA.777-201ENST00000516982 102 ntBASIC2.18□□□□□ -2.06
VPS50Q96JG6 AL137100.2-201ENST00000555786 315 ntBASIC2.18□□□□□ -2.06
VPS50Q96JG6 Y_RNA.771-201ENST00000598668 102 ntBASIC2.18□□□□□ -2.06
VPS50Q96JG6 AL353149.1-201ENST00000610667 244 ntBASIC2.18□□□□□ -2.06
VPS50Q96JG6 AC141273.2-201ENST00000618989 130 ntBASIC2.18□□□□□ -2.06
VPS50Q96JG6 Y_RNA.789-201ENST00000622480 102 ntBASIC2.18□□□□□ -2.06
VPS50Q96JG6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
VPS50Q96JG6 RNU1-96P-201ENST00000364163 162 ntBASIC2.17□□□□□ -2.06
VPS50Q96JG6 SNORA72.4-201ENST00000384174 132 ntBASIC2.17□□□□□ -2.06
VPS50Q96JG6 Y_RNA.456-201ENST00000384232 111 ntBASIC2.17□□□□□ -2.06
VPS50Q96JG6 Y_RNA.552-201ENST00000384665 112 ntBASIC2.17□□□□□ -2.06
VPS50Q96JG6 MTCO2P33-201ENST00000402100 465 ntBASIC2.17□□□□□ -2.06
VPS50Q96JG6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
VPS50Q96JG6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS50Q96JG6 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.17□□□□□ -2.06
VPS50Q96JG6 RNU7-172P-201ENST00000517125 64 ntBASIC2.17□□□□□ -2.06
VPS50Q96JG6 AC068647.2-201ENST00000637380 353 ntBASIC2.17□□□□□ -2.06
VPS50Q96JG6 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
VPS50Q96JG6 AL359851.1-201ENST00000569460 4997 ntBASIC2.16□□□□□ -2.06
VPS50Q96JG6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
VPS50Q96JG6 Y_RNA.292-201ENST00000364904 97 ntBASIC2.16□□□□□ -2.06
VPS50Q96JG6 U8.7-201ENST00000364940 136 ntBASIC2.16□□□□□ -2.06
VPS50Q96JG6 RNA5SP138-201ENST00000365098 114 ntBASIC2.16□□□□□ -2.06
VPS50Q96JG6 SNORA40.19-201ENST00000390846 128 ntBASIC2.16□□□□□ -2.06
VPS50Q96JG6 AL512604.1-201ENST00000404812 257 ntBASIC2.16□□□□□ -2.06
VPS50Q96JG6 MIR1261-201ENST00000408659 82 ntBASIC2.16□□□□□ -2.06
VPS50Q96JG6 AC104332.1-201ENST00000440471 797 ntBASIC2.16□□□□□ -2.06
VPS50Q96JG6 RNU7-141P-201ENST00000459304 62 ntBASIC2.16□□□□□ -2.06
VPS50Q96JG6 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.16□□□□□ -2.06
VPS50Q96JG6 RNU6-1146P-201ENST00000516282 102 ntBASIC2.16□□□□□ -2.06
VPS50Q96JG6 RNU6-794P-201ENST00000517261 64 ntBASIC2.16□□□□□ -2.06
VPS50Q96JG6 IGKV3-31-201ENST00000523109 329 ntBASIC2.16□□□□□ -2.06
VPS50Q96JG6 AC015720.1-201ENST00000565251 277 ntBASIC2.16□□□□□ -2.06
VPS50Q96JG6 AC130289.1-201ENST00000577321 73 ntBASIC2.16□□□□□ -2.06
VPS50Q96JG6 AC009779.6-201ENST00000603972 165 ntBASIC2.16□□□□□ -2.06
VPS50Q96JG6 AC046143.2-201ENST00000609789 160 ntBASIC2.16□□□□□ -2.06
VPS50Q96JG6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.16□□□□□ -2.06
VPS50Q96JG6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
VPS50Q96JG6 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
VPS50Q96JG6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
VPS50Q96JG6 RNY1-201ENST00000364228 113 ntBASIC2.15□□□□□ -2.07
VPS50Q96JG6 RNY4P28-201ENST00000365281 93 ntBASIC2.15□□□□□ -2.07
VPS50Q96JG6 RN7SKP223-201ENST00000410582 62 ntBASIC2.15□□□□□ -2.07
VPS50Q96JG6 AL139156.1-201ENST00000412785 841 ntBASIC2.15□□□□□ -2.07
VPS50Q96JG6 RPS15AP28-201ENST00000435088 386 ntBASIC2.15□□□□□ -2.07
VPS50Q96JG6 HSPE1P21-201ENST00000438283 308 ntBASIC2.15□□□□□ -2.07
VPS50Q96JG6 RNU6-717P-201ENST00000459076 104 ntBASIC2.15□□□□□ -2.07
VPS50Q96JG6 Y_RNA.638-201ENST00000459374 113 ntBASIC2.15□□□□□ -2.07
VPS50Q96JG6 AC117454.1-201ENST00000491120 168 ntBASIC2.15□□□□□ -2.07
VPS50Q96JG6 RNU4-71P-201ENST00000516258 113 ntBASIC2.15□□□□□ -2.07
VPS50Q96JG6 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.15□□□□□ -2.07
VPS50Q96JG6 AC073413.2-201ENST00000604332 360 ntBASIC2.15□□□□□ -2.07
VPS50Q96JG6 AL442067.1-201ENST00000613261 223 ntBASIC2.15□□□□□ -2.07
VPS50Q96JG6 uc_338.20-201ENST00000621563 178 ntBASIC2.15□□□□□ -2.07
VPS50Q96JG6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
VPS50Q96JG6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
VPS50Q96JG6 Y_RNA.274-201ENST00000364714 101 ntBASIC2.14□□□□□ -2.07
VPS50Q96JG6 RNU6-907P-201ENST00000390924 102 ntBASIC2.14□□□□□ -2.07
VPS50Q96JG6 RNVU1-2-201ENST00000516326 135 ntBASIC2.14□□□□□ -2.07
VPS50Q96JG6 RNY3P16-201ENST00000516338 101 ntBASIC2.14□□□□□ -2.07
VPS50Q96JG6 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.14□□□□□ -2.07
VPS50Q96JG6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
VPS50Q96JG6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
VPS50Q96JG6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.13□□□□□ -2.07
VPS50Q96JG6 RNU4-10P-201ENST00000364383 140 ntBASIC2.13□□□□□ -2.07
VPS50Q96JG6 RNU6-376P-201ENST00000384731 106 ntBASIC2.13□□□□□ -2.07
VPS50Q96JG6 MIR1298-201ENST00000408783 112 ntBASIC2.13□□□□□ -2.07
VPS50Q96JG6 RNA5SP338-201ENST00000410495 85 ntBASIC2.13□□□□□ -2.07
VPS50Q96JG6 RNU6-847P-201ENST00000411115 108 ntBASIC2.13□□□□□ -2.07
VPS50Q96JG6 Y_RNA.626-201ENST00000411288 95 ntBASIC2.13□□□□□ -2.07
VPS50Q96JG6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS50Q96JG6 CST2P1-201ENST00000425770 87 ntBASIC2.13□□□□□ -2.07
VPS50Q96JG6 AL162725.1-201ENST00000435405 301 ntBASIC2.13□□□□□ -2.07
VPS50Q96JG6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.13□□□□□ -2.07
VPS50Q96JG6 snoU13.26-201ENST00000459452 105 ntBASIC2.13□□□□□ -2.07
VPS50Q96JG6 AL163195.1-201ENST00000496941 348 ntBASIC2.13□□□□□ -2.07
VPS50Q96JG6 RNU7-99P-201ENST00000516271 62 ntBASIC2.13□□□□□ -2.07
VPS50Q96JG6 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms