Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 UBE2DNL-203ENST00000474922 222 ntBASIC2.39□□□□□ -2.03
PTCD3Q96EY7 RPS27P22-201ENST00000478056 241 ntBASIC2.39□□□□□ -2.03
PTCD3Q96EY7 RNA5SP320-201ENST00000516263 124 ntBASIC2.39□□□□□ -2.03
PTCD3Q96EY7 RNU6-1007P-201ENST00000516586 107 ntBASIC2.39□□□□□ -2.03
PTCD3Q96EY7 RNU6-856P-201ENST00000516959 98 ntBASIC2.39□□□□□ -2.03
PTCD3Q96EY7 RNU6-667P-201ENST00000517186 102 ntBASIC2.39□□□□□ -2.03
PTCD3Q96EY7 MIR4431-201ENST00000579990 94 ntBASIC2.39□□□□□ -2.03
PTCD3Q96EY7 AL391903.3-201ENST00000612158 163 ntBASIC2.39□□□□□ -2.03
PTCD3Q96EY7 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.39□□□□□ -2.03
PTCD3Q96EY7 AC132825.6-201ENST00000638861 357 ntBASIC2.39□□□□□ -2.03
PTCD3Q96EY7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PTCD3Q96EY7 CENPCP1-201ENST00000533085 2578 ntBASIC2.39□□□□□ -2.03
PTCD3Q96EY7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
PTCD3Q96EY7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PTCD3Q96EY7 SNORA67.1-201ENST00000364749 141 ntBASIC2.38□□□□□ -2.03
PTCD3Q96EY7 SNORD113-1-201ENST00000365321 69 ntBASIC2.38□□□□□ -2.03
PTCD3Q96EY7 Y_RNA.357-201ENST00000365487 109 ntBASIC2.38□□□□□ -2.03
PTCD3Q96EY7 SNORA25B-201ENST00000365507 128 ntBASIC2.38□□□□□ -2.03
PTCD3Q96EY7 RNU6-136P-201ENST00000384663 107 ntBASIC2.38□□□□□ -2.03
PTCD3Q96EY7 RNU6-239P-201ENST00000390990 99 ntBASIC2.38□□□□□ -2.03
PTCD3Q96EY7 AL162725.1-201ENST00000435405 301 ntBASIC2.38□□□□□ -2.03
PTCD3Q96EY7 AC108938.1-201ENST00000451204 136 ntBASIC2.38□□□□□ -2.03
PTCD3Q96EY7 RNU7-26P-201ENST00000458980 63 ntBASIC2.38□□□□□ -2.03
PTCD3Q96EY7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.38□□□□□ -2.03
PTCD3Q96EY7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.38□□□□□ -2.03
PTCD3Q96EY7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.38□□□□□ -2.03
PTCD3Q96EY7 MTND1P7-201ENST00000632801 297 ntBASIC2.38□□□□□ -2.03
PTCD3Q96EY7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
PTCD3Q96EY7 MIR367-201ENST00000362299 68 ntBASIC2.37□□□□□ -2.03
PTCD3Q96EY7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.37□□□□□ -2.03
PTCD3Q96EY7 Y_RNA.400-201ENST00000383963 111 ntBASIC2.37□□□□□ -2.03
PTCD3Q96EY7 AL606845.1-201ENST00000404881 255 ntBASIC2.37□□□□□ -2.03
PTCD3Q96EY7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.37□□□□□ -2.03
PTCD3Q96EY7 AC097462.1-201ENST00000514125 324 ntBASIC2.37□□□□□ -2.03
PTCD3Q96EY7 RNU7-116P-201ENST00000516940 62 ntBASIC2.37□□□□□ -2.03
PTCD3Q96EY7 MIR4438-201ENST00000585271 93 ntBASIC2.37□□□□□ -2.03
PTCD3Q96EY7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.36□□□□□ -2.03
PTCD3Q96EY7 RNU6-674P-201ENST00000363831 107 ntBASIC2.36□□□□□ -2.03
PTCD3Q96EY7 RNU6-1228P-201ENST00000391014 107 ntBASIC2.36□□□□□ -2.03
PTCD3Q96EY7 AL606753.1-201ENST00000427435 87 ntBASIC2.36□□□□□ -2.03
PTCD3Q96EY7 RNU6-437P-201ENST00000459408 95 ntBASIC2.36□□□□□ -2.03
PTCD3Q96EY7 RPL23AP54-201ENST00000495129 419 ntBASIC2.36□□□□□ -2.03
PTCD3Q96EY7 SNORA4.4-201ENST00000515921 135 ntBASIC2.36□□□□□ -2.03
PTCD3Q96EY7 SNORD116-25-201ENST00000516517 92 ntBASIC2.36□□□□□ -2.03
PTCD3Q96EY7 RNA5SP82-201ENST00000516707 92 ntBASIC2.36□□□□□ -2.03
PTCD3Q96EY7 MIR3616-201ENST00000584070 92 ntBASIC2.36□□□□□ -2.03
PTCD3Q96EY7 MIR4658-201ENST00000584344 65 ntBASIC2.36□□□□□ -2.03
PTCD3Q96EY7 AC067747.1-201ENST00000608026 250 ntBASIC2.36□□□□□ -2.03
PTCD3Q96EY7 MIR6817-201ENST00000615588 66 ntBASIC2.36□□□□□ -2.03
PTCD3Q96EY7 U6.73-201ENST00000619194 103 ntBASIC2.36□□□□□ -2.03
PTCD3Q96EY7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PTCD3Q96EY7 RNA5SP68-201ENST00000363885 119 ntBASIC2.35□□□□□ -2.03
PTCD3Q96EY7 SNORD114-6-201ENST00000364393 72 ntBASIC2.35□□□□□ -2.03
PTCD3Q96EY7 RNU6-1072P-201ENST00000384703 107 ntBASIC2.35□□□□□ -2.03
PTCD3Q96EY7 RNU6-443P-201ENST00000384780 107 ntBASIC2.35□□□□□ -2.03
PTCD3Q96EY7 RNU6-131P-201ENST00000391144 107 ntBASIC2.35□□□□□ -2.03
PTCD3Q96EY7 AL359511.1-201ENST00000402970 211 ntBASIC2.35□□□□□ -2.03
PTCD3Q96EY7 AC007064.1-201ENST00000412238 351 ntBASIC2.35□□□□□ -2.03
PTCD3Q96EY7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.35□□□□□ -2.03
PTCD3Q96EY7 AL513328.1-201ENST00000446460 224 ntBASIC2.35□□□□□ -2.03
PTCD3Q96EY7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.35□□□□□ -2.03
PTCD3Q96EY7 RNU7-172P-201ENST00000517125 64 ntBASIC2.35□□□□□ -2.03
PTCD3Q96EY7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.35□□□□□ -2.03
PTCD3Q96EY7 AL929325.1-201ENST00000603096 117 ntBASIC2.35□□□□□ -2.03
PTCD3Q96EY7 Y_RNA.778-201ENST00000620203 90 ntBASIC2.35□□□□□ -2.03
PTCD3Q96EY7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PTCD3Q96EY7 RNU6-151P-201ENST00000364158 107 ntBASIC2.34□□□□□ -2.03
PTCD3Q96EY7 RNU1-96P-201ENST00000364163 162 ntBASIC2.34□□□□□ -2.03
PTCD3Q96EY7 Y_RNA.215-201ENST00000364204 112 ntBASIC2.34□□□□□ -2.03
PTCD3Q96EY7 RNU6-81P-201ENST00000365608 104 ntBASIC2.34□□□□□ -2.03
PTCD3Q96EY7 SNORA72-201ENST00000384339 132 ntBASIC2.34□□□□□ -2.03
PTCD3Q96EY7 MIR144-201ENST00000384886 86 ntBASIC2.34□□□□□ -2.03
PTCD3Q96EY7 RN7SKP101-201ENST00000411376 320 ntBASIC2.34□□□□□ -2.03
PTCD3Q96EY7 HMGN2P34-201ENST00000437647 269 ntBASIC2.34□□□□□ -2.03
PTCD3Q96EY7 RPS4XP11-201ENST00000446897 772 ntBASIC2.34□□□□□ -2.03
PTCD3Q96EY7 AC104435.1-201ENST00000483483 166 ntBASIC2.34□□□□□ -2.03
PTCD3Q96EY7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.34□□□□□ -2.03
PTCD3Q96EY7 AC011406.1-201ENST00000512440 370 ntBASIC2.34□□□□□ -2.03
PTCD3Q96EY7 RPL23AP94-201ENST00000512518 302 ntBASIC2.34□□□□□ -2.03
PTCD3Q96EY7 RNA5SP148-201ENST00000516527 94 ntBASIC2.34□□□□□ -2.03
PTCD3Q96EY7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.34□□□□□ -2.03
PTCD3Q96EY7 AL021707.8-201ENST00000609428 183 ntBASIC2.34□□□□□ -2.03
PTCD3Q96EY7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.34□□□□□ -2.04
PTCD3Q96EY7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
PTCD3Q96EY7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PTCD3Q96EY7 AC016717.2-201ENST00000609089 5141 ntBASIC2.33□□□□□ -2.04
PTCD3Q96EY7 MIR15B-201ENST00000385045 98 ntBASIC2.33□□□□□ -2.04
PTCD3Q96EY7 MIR1262-201ENST00000408276 93 ntBASIC2.33□□□□□ -2.04
PTCD3Q96EY7 AC245102.2-201ENST00000448956 180 ntBASIC2.33□□□□□ -2.04
PTCD3Q96EY7 AL121914.1-201ENST00000450188 156 ntBASIC2.33□□□□□ -2.04
PTCD3Q96EY7 RNU7-128P-201ENST00000517247 62 ntBASIC2.33□□□□□ -2.04
PTCD3Q96EY7 NDUFA5P6-201ENST00000542110 379 ntBASIC2.33□□□□□ -2.04
PTCD3Q96EY7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.33□□□□□ -2.04
PTCD3Q96EY7 MIR4298-201ENST00000584380 73 ntBASIC2.33□□□□□ -2.04
PTCD3Q96EY7 AC006023.1-201ENST00000603944 259 ntBASIC2.33□□□□□ -2.04
PTCD3Q96EY7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.33□□□□□ -2.04
PTCD3Q96EY7 MIR3658-201ENST00000636291 56 ntBASIC2.33□□□□□ -2.04
PTCD3Q96EY7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PTCD3Q96EY7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PTCD3Q96EY7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 640.7 ms