Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RNA5SP499-201ENST00000363982 119 ntBASIC0.57□□□□□ -2.32
ECHDC3Q96DC8 Y_RNA.194-201ENST00000363985 102 ntBASIC0.57□□□□□ -2.32
ECHDC3Q96DC8 Y_RNA.557-201ENST00000384680 107 ntBASIC0.57□□□□□ -2.32
ECHDC3Q96DC8 Y_RNA.559-201ENST00000384686 107 ntBASIC0.57□□□□□ -2.32
ECHDC3Q96DC8 AC093019.1-201ENST00000443135 252 ntBASIC0.57□□□□□ -2.32
ECHDC3Q96DC8 RPS29P25-201ENST00000481709 171 ntBASIC0.57□□□□□ -2.32
ECHDC3Q96DC8 RNU1-54P-201ENST00000517181 120 ntBASIC0.57□□□□□ -2.32
ECHDC3Q96DC8 MTND4LP26-201ENST00000518144 282 ntBASIC0.57□□□□□ -2.32
ECHDC3Q96DC8 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.57□□□□□ -2.32
ECHDC3Q96DC8 SEPT14P17-201ENST00000617978 177 ntBASIC0.57□□□□□ -2.32
ECHDC3Q96DC8 RNU6-1335P-201ENST00000365426 107 ntBASIC0.56□□□□□ -2.32
ECHDC3Q96DC8 RNU6-318P-201ENST00000384283 103 ntBASIC0.56□□□□□ -2.32
ECHDC3Q96DC8 MIR1185-1-201ENST00000408598 86 ntBASIC0.56□□□□□ -2.32
ECHDC3Q96DC8 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.56□□□□□ -2.32
ECHDC3Q96DC8 U8.22-201ENST00000459141 133 ntBASIC0.56□□□□□ -2.32
ECHDC3Q96DC8 RNU6-314P-201ENST00000516574 104 ntBASIC0.56□□□□□ -2.32
ECHDC3Q96DC8 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.56□□□□□ -2.32
ECHDC3Q96DC8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.56□□□□□ -2.32
ECHDC3Q96DC8 AC131055.1-201ENST00000584626 316 ntBASIC0.56□□□□□ -2.32
ECHDC3Q96DC8 AC018462.2-201ENST00000605375 395 ntBASIC0.56□□□□□ -2.32
ECHDC3Q96DC8 AC012557.2-201ENST00000605919 418 ntBASIC0.56□□□□□ -2.32
ECHDC3Q96DC8 MIR6128-201ENST00000615528 109 ntBASIC0.56□□□□□ -2.32
ECHDC3Q96DC8 AC244015.1-201ENST00000622301 99 ntBASIC0.56□□□□□ -2.32
ECHDC3Q96DC8 MIR3674-201ENST00000636576 68 ntBASIC0.56□□□□□ -2.32
ECHDC3Q96DC8 MIR3662-201ENST00000637030 95 ntBASIC0.56□□□□□ -2.32
ECHDC3Q96DC8 Y_RNA.157-201ENST00000363638 102 ntBASIC0.55□□□□□ -2.32
ECHDC3Q96DC8 RNU6-1013P-201ENST00000384180 107 ntBASIC0.55□□□□□ -2.32
ECHDC3Q96DC8 Y_RNA.498-201ENST00000384460 102 ntBASIC0.55□□□□□ -2.32
ECHDC3Q96DC8 MIR452-201ENST00000385020 85 ntBASIC0.55□□□□□ -2.32
ECHDC3Q96DC8 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
ECHDC3Q96DC8 RNA5SP118-201ENST00000410385 109 ntBASIC0.55□□□□□ -2.32
ECHDC3Q96DC8 DLGAP5P1-201ENST00000430307 464 ntBASIC0.55□□□□□ -2.32
ECHDC3Q96DC8 AL162725.1-201ENST00000435405 301 ntBASIC0.55□□□□□ -2.32
ECHDC3Q96DC8 AC092628.1-201ENST00000436250 252 ntBASIC0.55□□□□□ -2.32
ECHDC3Q96DC8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.55□□□□□ -2.32
ECHDC3Q96DC8 U7.7-201ENST00000459276 60 ntBASIC0.55□□□□□ -2.32
ECHDC3Q96DC8 AC114811.1-201ENST00000507207 168 ntBASIC0.55□□□□□ -2.32
ECHDC3Q96DC8 AC026782.1-201ENST00000512952 449 ntBASIC0.55□□□□□ -2.32
ECHDC3Q96DC8 RNU6-273P-201ENST00000516937 96 ntBASIC0.55□□□□□ -2.32
ECHDC3Q96DC8 AP003484.1-201ENST00000530974 250 ntBASIC0.55□□□□□ -2.32
ECHDC3Q96DC8 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.55□□□□□ -2.32
ECHDC3Q96DC8 AC093913.1-201ENST00000614178 329 ntBASIC0.55□□□□□ -2.32
ECHDC3Q96DC8 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
ECHDC3Q96DC8 MIR6513-201ENST00000621188 64 ntBASIC0.55□□□□□ -2.32
ECHDC3Q96DC8 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
ECHDC3Q96DC8 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 RNA5SP347-201ENST00000362445 119 ntBASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 RNY1P16-201ENST00000363063 111 ntBASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 AC117470.1-201ENST00000381974 330 ntBASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 RNU6-163P-201ENST00000384396 106 ntBASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 MIR1298-201ENST00000408783 112 ntBASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 AL354751.2-201ENST00000415471 210 ntBASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 PIGPP3-201ENST00000425307 415 ntBASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 MTND4LP16-201ENST00000440828 295 ntBASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 UBE2V1P7-201ENST00000446395 340 ntBASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 RNU6-1132P-201ENST00000459214 107 ntBASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 RNU6-625P-201ENST00000459412 107 ntBASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 MTND5P5-201ENST00000503764 376 ntBASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 RNA5SP436-201ENST00000516020 115 ntBASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 RN7SKP164-201ENST00000516138 266 ntBASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 RNU6-63P-201ENST00000516690 95 ntBASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 SNORA74.3-201ENST00000517108 154 ntBASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 AC103591.3-201ENST00000608684 209 ntBASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 AC007014.2-201ENST00000615581 479 ntBASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 MIR5087-201ENST00000635826 76 ntBASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.54□□□□□ -2.32
ECHDC3Q96DC8 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
ECHDC3Q96DC8 Y_RNA.89-201ENST00000363031 102 ntBASIC0.53□□□□□ -2.32
ECHDC3Q96DC8 Y_RNA.517-201ENST00000384551 106 ntBASIC0.53□□□□□ -2.32
ECHDC3Q96DC8 RNU6-136P-201ENST00000384663 107 ntBASIC0.53□□□□□ -2.32
ECHDC3Q96DC8 RNA5SP511-201ENST00000410487 115 ntBASIC0.53□□□□□ -2.32
ECHDC3Q96DC8 AC009161.1-201ENST00000417306 376 ntBASIC0.53□□□□□ -2.32
ECHDC3Q96DC8 MTCYBP10-201ENST00000424905 650 ntBASIC0.53□□□□□ -2.32
ECHDC3Q96DC8 RPL23AP50-201ENST00000434149 455 ntBASIC0.53□□□□□ -2.32
ECHDC3Q96DC8 ELOCP24-201ENST00000456370 334 ntBASIC0.53□□□□□ -2.32
ECHDC3Q96DC8 SNORA40.9-201ENST00000515895 93 ntBASIC0.53□□□□□ -2.32
ECHDC3Q96DC8 RNU4-54P-201ENST00000516428 129 ntBASIC0.53□□□□□ -2.32
ECHDC3Q96DC8 RNA5SP121-201ENST00000516537 101 ntBASIC0.53□□□□□ -2.32
ECHDC3Q96DC8 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.53□□□□□ -2.32
ECHDC3Q96DC8 AC109810.1-201ENST00000534066 224 ntBASIC0.53□□□□□ -2.32
ECHDC3Q96DC8 AL591926.4-201ENST00000616895 298 ntBASIC0.53□□□□□ -2.32
ECHDC3Q96DC8 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.53□□□□□ -2.32
ECHDC3Q96DC8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
ECHDC3Q96DC8 MIR103A2-201ENST00000362154 78 ntBASIC0.52□□□□□ -2.33
ECHDC3Q96DC8 Y_RNA.9-201ENST00000362354 101 ntBASIC0.52□□□□□ -2.33
ECHDC3Q96DC8 Y_RNA.358-201ENST00000365491 99 ntBASIC0.52□□□□□ -2.33
ECHDC3Q96DC8 SNORD116-2-201ENST00000384274 95 ntBASIC0.52□□□□□ -2.33
ECHDC3Q96DC8 SNORD116-6-201ENST00000384711 96 ntBASIC0.52□□□□□ -2.33
ECHDC3Q96DC8 RNU6-1105P-201ENST00000384774 107 ntBASIC0.52□□□□□ -2.33
ECHDC3Q96DC8 RNU6-700P-201ENST00000391043 107 ntBASIC0.52□□□□□ -2.33
ECHDC3Q96DC8 RNA5SP475-201ENST00000410568 110 ntBASIC0.52□□□□□ -2.33
ECHDC3Q96DC8 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.52□□□□□ -2.33
ECHDC3Q96DC8 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.52□□□□□ -2.33
ECHDC3Q96DC8 RNU7-41P-201ENST00000515917 61 ntBASIC0.52□□□□□ -2.33
ECHDC3Q96DC8 RNU2-12P-201ENST00000517216 168 ntBASIC0.52□□□□□ -2.33
ECHDC3Q96DC8 AC023442.1-201ENST00000531247 422 ntBASIC0.52□□□□□ -2.33
ECHDC3Q96DC8 AC245505.1-201ENST00000556398 224 ntBASIC0.52□□□□□ -2.33
ECHDC3Q96DC8 AC025627.3-201ENST00000582078 182 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms