Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 RPL21P9-201ENST00000556149 474 ntBASIC2.34□□□□□ -2.03
RAPGEF4Q8WZA2 MIR502-201ENST00000606349 86 ntBASIC2.34□□□□□ -2.03
RAPGEF4Q8WZA2 SNORD14A-201ENST00000606526 91 ntBASIC2.34□□□□□ -2.03
RAPGEF4Q8WZA2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.34□□□□□ -2.03
RAPGEF4Q8WZA2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
RAPGEF4Q8WZA2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
RAPGEF4Q8WZA2 Y_RNA.60-201ENST00000362831 98 ntBASIC2.33□□□□□ -2.04
RAPGEF4Q8WZA2 RNU6-379P-201ENST00000363813 104 ntBASIC2.33□□□□□ -2.04
RAPGEF4Q8WZA2 Y_RNA.217-201ENST00000364214 105 ntBASIC2.33□□□□□ -2.04
RAPGEF4Q8WZA2 Y_RNA.287-201ENST00000364853 94 ntBASIC2.33□□□□□ -2.04
RAPGEF4Q8WZA2 Y_RNA.368-201ENST00000365547 113 ntBASIC2.33□□□□□ -2.04
RAPGEF4Q8WZA2 Y_RNA.476-201ENST00000384347 108 ntBASIC2.33□□□□□ -2.04
RAPGEF4Q8WZA2 AL117342.1-201ENST00000404861 406 ntBASIC2.33□□□□□ -2.04
RAPGEF4Q8WZA2 HMGN2P34-201ENST00000437647 269 ntBASIC2.33□□□□□ -2.04
RAPGEF4Q8WZA2 ATP5J2P3-201ENST00000451550 258 ntBASIC2.33□□□□□ -2.04
RAPGEF4Q8WZA2 Y_RNA.641-201ENST00000459414 105 ntBASIC2.33□□□□□ -2.04
RAPGEF4Q8WZA2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.33□□□□□ -2.04
RAPGEF4Q8WZA2 AL512605.2-201ENST00000592972 256 ntBASIC2.33□□□□□ -2.04
RAPGEF4Q8WZA2 AC010900.2-201ENST00000604508 210 ntBASIC2.33□□□□□ -2.04
RAPGEF4Q8WZA2 BX284668.6-201ENST00000606899 438 ntBASIC2.33□□□□□ -2.04
RAPGEF4Q8WZA2 AC245884.12-201ENST00000615364 59 ntBASIC2.33□□□□□ -2.04
RAPGEF4Q8WZA2 MIR338-201ENST00000636369 67 ntBASIC2.33□□□□□ -2.04
RAPGEF4Q8WZA2 AC131280.1-202ENST00000624067 4211 ntBASIC2.32□□□□□ -2.04
RAPGEF4Q8WZA2 SNORA16.1-201ENST00000364597 132 ntBASIC2.32□□□□□ -2.04
RAPGEF4Q8WZA2 RNA5SP37-201ENST00000365420 130 ntBASIC2.32□□□□□ -2.04
RAPGEF4Q8WZA2 Y_RNA.539-201ENST00000384635 107 ntBASIC2.32□□□□□ -2.04
RAPGEF4Q8WZA2 HMGN2P39-201ENST00000398005 273 ntBASIC2.32□□□□□ -2.04
RAPGEF4Q8WZA2 AL135790.2-201ENST00000437701 267 ntBASIC2.32□□□□□ -2.04
RAPGEF4Q8WZA2 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.32□□□□□ -2.04
RAPGEF4Q8WZA2 RNA5SP20-201ENST00000515976 84 ntBASIC2.32□□□□□ -2.04
RAPGEF4Q8WZA2 AC121758.2-201ENST00000553271 193 ntBASIC2.32□□□□□ -2.04
RAPGEF4Q8WZA2 AL137100.2-201ENST00000555786 315 ntBASIC2.32□□□□□ -2.04
RAPGEF4Q8WZA2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.32□□□□□ -2.04
RAPGEF4Q8WZA2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.32□□□□□ -2.04
RAPGEF4Q8WZA2 MIR4303-201ENST00000581299 66 ntBASIC2.32□□□□□ -2.04
RAPGEF4Q8WZA2 U6.73-201ENST00000619194 103 ntBASIC2.32□□□□□ -2.04
RAPGEF4Q8WZA2 AC022513.1-201ENST00000624512 117 ntBASIC2.32□□□□□ -2.04
RAPGEF4Q8WZA2 Y_RNA.82-201ENST00000363000 102 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 Y_RNA.92-201ENST00000363043 102 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 RNU6-23P-201ENST00000363283 107 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 SNORA3A-201ENST00000364113 130 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 RNU1-96P-201ENST00000364163 162 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 Y_RNA.235-201ENST00000364412 102 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 SNORA20.1-201ENST00000364790 130 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 Y_RNA.306-201ENST00000365015 102 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 Y_RNA.312-201ENST00000365089 102 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 Y_RNA.322-201ENST00000365151 102 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 RNU6-117P-201ENST00000365415 107 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 Y_RNA.456-201ENST00000384232 111 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 Y_RNA.477-201ENST00000384352 108 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 MIR1253-201ENST00000408273 105 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 MIR1283-2-201ENST00000408621 87 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 Y_RNA.650-201ENST00000459002 102 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 AC090255.1-201ENST00000495779 349 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 RNU6-1041P-201ENST00000516254 102 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 Y_RNA.777-201ENST00000516982 102 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 AC136628.3-201ENST00000521868 290 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 Y_RNA.771-201ENST00000598668 102 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 AL078604.3-201ENST00000615580 211 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 Y_RNA.789-201ENST00000622480 102 ntBASIC2.31□□□□□ -2.04
RAPGEF4Q8WZA2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.3□□□□□ -2.04
RAPGEF4Q8WZA2 Y_RNA.226-201ENST00000364337 114 ntBASIC2.3□□□□□ -2.04
RAPGEF4Q8WZA2 RNU6-740P-201ENST00000364734 105 ntBASIC2.3□□□□□ -2.04
RAPGEF4Q8WZA2 Y_RNA.310-201ENST00000365063 113 ntBASIC2.3□□□□□ -2.04
RAPGEF4Q8WZA2 RNU6-407P-201ENST00000365280 104 ntBASIC2.3□□□□□ -2.04
RAPGEF4Q8WZA2 MIR518A2-201ENST00000384966 87 ntBASIC2.3□□□□□ -2.04
RAPGEF4Q8WZA2 AP1B1P2-201ENST00000416196 106 ntBASIC2.3□□□□□ -2.04
RAPGEF4Q8WZA2 BX510359.4-201ENST00000423750 193 ntBASIC2.3□□□□□ -2.04
RAPGEF4Q8WZA2 AC010154.1-201ENST00000425857 269 ntBASIC2.3□□□□□ -2.04
RAPGEF4Q8WZA2 RPL36AP21-201ENST00000490372 323 ntBASIC2.3□□□□□ -2.04
RAPGEF4Q8WZA2 MIR4643-201ENST00000577473 78 ntBASIC2.3□□□□□ -2.04
RAPGEF4Q8WZA2 MIR4282-201ENST00000583613 67 ntBASIC2.3□□□□□ -2.04
RAPGEF4Q8WZA2 AC005786.1-201ENST00000588553 154 ntBASIC2.3□□□□□ -2.04
RAPGEF4Q8WZA2 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.3□□□□□ -2.04
RAPGEF4Q8WZA2 MIR203B-201ENST00000636080 86 ntBASIC2.3□□□□□ -2.04
RAPGEF4Q8WZA2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.3□□□□□ -2.04
RAPGEF4Q8WZA2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
RAPGEF4Q8WZA2 SNORD115-3-201ENST00000363100 82 ntBASIC2.29□□□□□ -2.04
RAPGEF4Q8WZA2 RNU1-22P-201ENST00000363334 158 ntBASIC2.29□□□□□ -2.04
RAPGEF4Q8WZA2 RNU6-801P-201ENST00000364087 105 ntBASIC2.29□□□□□ -2.04
RAPGEF4Q8WZA2 Y_RNA.277-201ENST00000364754 102 ntBASIC2.29□□□□□ -2.04
RAPGEF4Q8WZA2 RNA5SP465-201ENST00000391195 109 ntBASIC2.29□□□□□ -2.04
RAPGEF4Q8WZA2 RNU6-321P-201ENST00000410912 106 ntBASIC2.29□□□□□ -2.04
RAPGEF4Q8WZA2 CST2P1-201ENST00000425770 87 ntBASIC2.29□□□□□ -2.04
RAPGEF4Q8WZA2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.29□□□□□ -2.04
RAPGEF4Q8WZA2 SNORD2.1-201ENST00000458762 69 ntBASIC2.29□□□□□ -2.04
RAPGEF4Q8WZA2 RPS27P22-201ENST00000478056 241 ntBASIC2.29□□□□□ -2.04
RAPGEF4Q8WZA2 AC097462.1-201ENST00000514125 324 ntBASIC2.29□□□□□ -2.04
RAPGEF4Q8WZA2 RNU6-1337P-201ENST00000516525 95 ntBASIC2.29□□□□□ -2.04
RAPGEF4Q8WZA2 AC027419.1-201ENST00000522976 328 ntBASIC2.29□□□□□ -2.04
RAPGEF4Q8WZA2 AC009127.3-201ENST00000570531 403 ntBASIC2.29□□□□□ -2.04
RAPGEF4Q8WZA2 MIR4438-201ENST00000585271 93 ntBASIC2.29□□□□□ -2.04
RAPGEF4Q8WZA2 AL162424.1-201ENST00000602325 221 ntBASIC2.29□□□□□ -2.04
RAPGEF4Q8WZA2 AC012640.5-201ENST00000623897 319 ntBASIC2.29□□□□□ -2.04
RAPGEF4Q8WZA2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
RAPGEF4Q8WZA2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms