| CNNM3 | Q8NE01 | MT-ND4-201 | ENST00000361381 | 1378 nt | APPRIS P1 BASIC | 0.93 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | PPP2R5A-205 | ENST00000537030 | 1719 nt | TSL 2 BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | RNY1P16-201 | ENST00000363063 | 111 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | LINC00583-201 | ENST00000381010 | 387 nt | TSL 2 BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | Y_RNA.557-201 | ENST00000384680 | 107 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | MIR489-201 | ENST00000384923 | 84 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | MIR146A-201 | ENST00000385201 | 99 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | RNU6-192P-201 | ENST00000391253 | 100 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | MIR891A-201 | ENST00000401237 | 79 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | Y_RNA.599-201 | ENST00000410489 | 109 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | AC004941.2-201 | ENST00000427009 | 228 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | LINC02061-201 | ENST00000514225 | 335 nt | TSL 3 BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | ACA64.5-201 | ENST00000516207 | 127 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | RNU6-1016P-201 | ENST00000516689 | 94 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | AC022868.1-201 | ENST00000517767 | 391 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | AC090142.3-201 | ENST00000519012 | 385 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | AC100763.1-201 | ENST00000532735 | 522 nt | TSL 3 BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | AC090371.2-202 | ENST00000582239 | 644 nt | TSL 5 BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | AC060780.3-201 | ENST00000589464 | 80 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | AL117336.2-201 | ENST00000602435 | 335 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | AC108706.1-201 | ENST00000611053 | 297 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | MIR1244-1-201 | ENST00000612829 | 85 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | AC098679.4-201 | ENST00000624241 | 654 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | MIR1244-3-201 | ENST00000635744 | 85 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | U6.115-201 | ENST00000636045 | 103 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | MIR1244-2-201 | ENST00000636449 | 85 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | MIR3674-201 | ENST00000636576 | 68 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | MIR1244-4-202 | ENST00000636813 | 85 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | CASC19-280 | ENST00000642102 | 1351 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | AC008163.1-202 | ENST00000636004 | 2889 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | RNY3P11-201 | ENST00000364153 | 102 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | RNU6-593P-201 | ENST00000364716 | 112 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | Y_RNA.354-201 | ENST00000365448 | 111 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | RNU6-510P-201 | ENST00000391239 | 108 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | MIR942-201 | ENST00000401111 | 86 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | RNU2-64P-201 | ENST00000411315 | 191 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | PDCL2P1-201 | ENST00000419302 | 352 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | AL121580.1-201 | ENST00000449941 | 219 nt | TSL 3 BASIC | 0.91 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | ZEB1-AS1-204 | ENST00000450834 | 576 nt | TSL 3 BASIC | 0.91 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | RNU6-1096P-201 | ENST00000517089 | 102 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | AC011712.1-201 | ENST00000588959 | 234 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | ANGPTL3-201 | ENST00000371129 | 2805 nt | APPRIS P1 TSL 1 (best) BASIC | 0.91 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | CCDC14-221 | ENST00000489746 | 6476 nt | APPRIS ALT2 TSL 1 (best) BASIC | 0.91 | □□□□□ -2.26 | | |
| CNNM3 | Q8NE01 | MIR410-201 | ENST00000362222 | 80 nt | BASIC | 0.9 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | Y_RNA.160-201 | ENST00000363677 | 92 nt | BASIC | 0.9 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | Y_RNA.248-201 | ENST00000364501 | 109 nt | BASIC | 0.9 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | Y_RNA.358-201 | ENST00000365491 | 99 nt | BASIC | 0.9 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | Y_RNA.363-201 | ENST00000365529 | 113 nt | BASIC | 0.9 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | RNU6-1310P-201 | ENST00000384153 | 107 nt | BASIC | 0.9 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | RNU6-601P-201 | ENST00000384540 | 107 nt | BASIC | 0.9 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | RNU6ATAC27P-201 | ENST00000408289 | 119 nt | BASIC | 0.9 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | AC012445.1-201 | ENST00000442831 | 607 nt | TSL 3 BASIC | 0.9 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | AC122707.1-201 | ENST00000502882 | 219 nt | TSL 2 BASIC | 0.9 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | AC105029.1-201 | ENST00000520250 | 669 nt | BASIC | 0.9 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | AC092071.1-201 | ENST00000597260 | 549 nt | TSL 5 BASIC | 0.9 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | 5S_rRNA.13-201 | ENST00000622298 | 123 nt | BASIC | 0.9 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | KLRA1P-203 | ENST00000535939 | 2353 nt | TSL 1 (best) BASIC | 0.89 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | RNU6-318P-201 | ENST00000384283 | 103 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | RNU6-163P-201 | ENST00000384396 | 106 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | RNU6-136P-201 | ENST00000384663 | 107 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | TRAJ22-201 | ENST00000390515 | 63 nt | APPRIS P1 BASIC | 0.89 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | RNU6-876P-201 | ENST00000391295 | 104 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | OPRPN-201 | ENST00000399575 | 1040 nt | APPRIS P1 TSL 1 (best) BASIC | 0.89 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | RNU5A-5P-201 | ENST00000411054 | 116 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | NCKAP5-IT1-201 | ENST00000416437 | 554 nt | TSL 4 BASIC | 0.89 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | AC092423.1-201 | ENST00000430165 | 186 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | MTND1P34-201 | ENST00000438556 | 671 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | RPL30P15-201 | ENST00000457129 | 321 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | RNU7-90P-201 | ENST00000459216 | 62 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | CYCTP-201 | ENST00000504253 | 315 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | SNORD111.1-201 | ENST00000516421 | 86 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | Y_RNA.708-201 | ENST00000516950 | 96 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | MIR5000-201 | ENST00000577717 | 103 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | LUZP6-201 | ENST00000589735 | 177 nt | APPRIS P1 BASIC | 0.89 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | TRAJ36-201 | ENST00000614481 | 58 nt | APPRIS P1 BASIC | 0.89 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | MIRLET7C-201 | ENST00000362160 | 84 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | RNU6-833P-201 | ENST00000363486 | 107 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | RNU6-99P-201 | ENST00000364721 | 107 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | Y_RNA.390-201 | ENST00000383932 | 102 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | SNORA75.4-201 | ENST00000391278 | 119 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | AL590422.1-201 | ENST00000451829 | 364 nt | TSL 3 BASIC | 0.88 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | AC009468.2-201 | ENST00000457372 | 366 nt | TSL 5 BASIC | 0.88 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | SNORA40.9-201 | ENST00000515895 | 93 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | AC055872.1-201 | ENST00000570978 | 278 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | Z84484.1-202 | ENST00000612718 | 60 nt | TSL 5 BASIC | 0.88 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | KCNQ1OT1_3.1-201 | ENST00000616504 | 116 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | SNORD114-7-201 | ENST00000362520 | 77 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | RNU6-454P-201 | ENST00000364292 | 107 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | RNU4-41P-201 | ENST00000364426 | 143 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | SNORD81.2-201 | ENST00000365153 | 76 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | RNU6-767P-201 | ENST00000384132 | 107 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | RNU6-1105P-201 | ENST00000384774 | 107 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | MT-TL1-201 | ENST00000386347 | 75 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | Y_RNA.621-201 | ENST00000411065 | 96 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | RPS3AP1-201 | ENST00000413190 | 320 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | RPL23AP50-201 | ENST00000434149 | 455 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | AC107399.1-201 | ENST00000451226 | 265 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | AC245047.8-201 | ENST00000456455 | 284 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | RNU7-21P-201 | ENST00000459430 | 62 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CNNM3 | Q8NE01 | RNU6-63P-201 | ENST00000516690 | 95 nt | BASIC | 0.87 | □□□□□ -2.27 | | |