Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.45□□□□□ -1.86
SIX5Q8N196 AC007536.1-201ENST00000533382 349 ntBASIC3.45□□□□□ -1.86
SIX5Q8N196 MIR4425-201ENST00000580572 84 ntBASIC3.45□□□□□ -1.86
SIX5Q8N196 AC008507.4-201ENST00000585464 127 ntBASIC3.45□□□□□ -1.86
SIX5Q8N196 AL670379.3-201ENST00000605040 251 ntBASIC3.45□□□□□ -1.86
SIX5Q8N196 AL449363.1-201ENST00000617815 186 ntBASIC3.45□□□□□ -1.86
SIX5Q8N196 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SIX5Q8N196 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SIX5Q8N196 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SIX5Q8N196 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.44□□□□□ -1.86
SIX5Q8N196 AL356274.2-201ENST00000624379 3752 ntBASIC3.44□□□□□ -1.86
SIX5Q8N196 RNU6-309P-201ENST00000364573 106 ntBASIC3.44□□□□□ -1.86
SIX5Q8N196 SNORD58C-201ENST00000365223 64 ntBASIC3.44□□□□□ -1.86
SIX5Q8N196 MIR891A-201ENST00000401237 79 ntBASIC3.44□□□□□ -1.86
SIX5Q8N196 AF228730.3-201ENST00000436691 102 ntBASIC3.44□□□□□ -1.86
SIX5Q8N196 AC107083.1-201ENST00000439643 279 ntBASIC3.44□□□□□ -1.86
SIX5Q8N196 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.44□□□□□ -1.86
SIX5Q8N196 AP002004.2-201ENST00000531656 154 ntBASIC3.44□□□□□ -1.86
SIX5Q8N196 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.44□□□□□ -1.86
SIX5Q8N196 AC108081.1-201ENST00000604358 221 ntBASIC3.44□□□□□ -1.86
SIX5Q8N196 AL022345.2-201ENST00000606307 135 ntBASIC3.44□□□□□ -1.86
SIX5Q8N196 AL121890.5-201ENST00000620848 304 ntBASIC3.44□□□□□ -1.86
SIX5Q8N196 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SIX5Q8N196 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SIX5Q8N196 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SIX5Q8N196 MIR449A-201ENST00000362113 91 ntBASIC3.43□□□□□ -1.86
SIX5Q8N196 SNORD24-201ENST00000383884 75 ntBASIC3.43□□□□□ -1.86
SIX5Q8N196 RNU6-1072P-201ENST00000384703 107 ntBASIC3.43□□□□□ -1.86
SIX5Q8N196 RNU6-443P-201ENST00000384780 107 ntBASIC3.43□□□□□ -1.86
SIX5Q8N196 MIR548A3-201ENST00000385297 97 ntBASIC3.43□□□□□ -1.86
SIX5Q8N196 SNORD72-201ENST00000390994 80 ntBASIC3.43□□□□□ -1.86
SIX5Q8N196 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX5Q8N196 AL136360.1-201ENST00000503377 1900 ntBASIC3.42□□□□□ -1.86
SIX5Q8N196 MFSD8-233ENST00000641482 4860 ntBASIC3.42□□□□□ -1.86
SIX5Q8N196 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX5Q8N196 SNORA1-201ENST00000384107 130 ntBASIC3.42□□□□□ -1.86
SIX5Q8N196 AL049830.1-201ENST00000468034 425 ntBASIC3.42□□□□□ -1.86
SIX5Q8N196 RPS26P45-201ENST00000471748 340 ntBASIC3.42□□□□□ -1.86
SIX5Q8N196 CYCTP-201ENST00000504253 315 ntBASIC3.42□□□□□ -1.86
SIX5Q8N196 SCGB1D5P-201ENST00000515134 247 ntBASIC3.42□□□□□ -1.86
SIX5Q8N196 AC024995.1-201ENST00000523014 93 ntBASIC3.42□□□□□ -1.86
SIX5Q8N196 CYCSP26-201ENST00000534107 320 ntBASIC3.42□□□□□ -1.86
SIX5Q8N196 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.42□□□□□ -1.86
SIX5Q8N196 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.42□□□□□ -1.86
SIX5Q8N196 AL591926.4-201ENST00000616895 298 ntBASIC3.42□□□□□ -1.86
SIX5Q8N196 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
SIX5Q8N196 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SIX5Q8N196 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SIX5Q8N196 SNORD114-6-201ENST00000364393 72 ntBASIC3.41□□□□□ -1.86
SIX5Q8N196 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SIX5Q8N196 SNORD61-201ENST00000384252 73 ntBASIC3.41□□□□□ -1.86
SIX5Q8N196 RN7SL863P-201ENST00000462370 296 ntBASIC3.41□□□□□ -1.86
SIX5Q8N196 RNU6-693P-201ENST00000516134 107 ntBASIC3.41□□□□□ -1.86
SIX5Q8N196 AC104984.5-201ENST00000586878 94 ntBASIC3.41□□□□□ -1.86
SIX5Q8N196 U4atac.1-201ENST00000618345 95 ntBASIC3.41□□□□□ -1.86
SIX5Q8N196 AL035425.3-201ENST00000564206 4996 ntBASIC3.41□□□□□ -1.86
SIX5Q8N196 RNU6-888P-201ENST00000363010 101 ntBASIC3.4□□□□□ -1.87
SIX5Q8N196 SNORA33-201ENST00000363664 130 ntBASIC3.4□□□□□ -1.87
SIX5Q8N196 Y_RNA.346-201ENST00000365385 112 ntBASIC3.4□□□□□ -1.87
SIX5Q8N196 RNU6-1292P-201ENST00000383856 107 ntBASIC3.4□□□□□ -1.87
SIX5Q8N196 SNORA22-201ENST00000383907 134 ntBASIC3.4□□□□□ -1.87
SIX5Q8N196 Y_RNA.630-201ENST00000411370 108 ntBASIC3.4□□□□□ -1.87
SIX5Q8N196 CST2P1-201ENST00000425770 87 ntBASIC3.4□□□□□ -1.87
SIX5Q8N196 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.4□□□□□ -1.87
SIX5Q8N196 SNRPGP13-201ENST00000442212 177 ntBASIC3.4□□□□□ -1.87
SIX5Q8N196 RPS27P29-201ENST00000463110 252 ntBASIC3.4□□□□□ -1.87
SIX5Q8N196 Y_RNA.666-201ENST00000516187 112 ntBASIC3.4□□□□□ -1.87
SIX5Q8N196 RNU6-589P-201ENST00000516485 107 ntBASIC3.4□□□□□ -1.87
SIX5Q8N196 MIR6715A-201ENST00000615929 79 ntBASIC3.4□□□□□ -1.87
SIX5Q8N196 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
SIX5Q8N196 U6.108-201ENST00000637764 58 ntBASIC3.4□□□□□ -1.87
SIX5Q8N196 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SIX5Q8N196 AC093010.3-201ENST00000570269 15214 ntBASIC3.39□□□□□ -1.87
SIX5Q8N196 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SIX5Q8N196 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SIX5Q8N196 SNORA1B-201ENST00000362535 133 ntBASIC3.39□□□□□ -1.87
SIX5Q8N196 SNORD68-201ENST00000363214 84 ntBASIC3.39□□□□□ -1.87
SIX5Q8N196 RNU6-508P-201ENST00000363231 103 ntBASIC3.39□□□□□ -1.87
SIX5Q8N196 SNORD116-21-201ENST00000384507 92 ntBASIC3.39□□□□□ -1.87
SIX5Q8N196 SNORA26.7-201ENST00000391288 122 ntBASIC3.39□□□□□ -1.87
SIX5Q8N196 Y_RNA.617-201ENST00000410920 90 ntBASIC3.39□□□□□ -1.87
SIX5Q8N196 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.39□□□□□ -1.87
SIX5Q8N196 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.39□□□□□ -1.87
SIX5Q8N196 MTND5P32-201ENST00000560711 1802 ntBASIC3.39□□□□□ -1.87
SIX5Q8N196 FAM35CP-201ENST00000554755 2470 ntBASIC3.38□□□□□ -1.87
SIX5Q8N196 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SIX5Q8N196 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SIX5Q8N196 MIR1262-201ENST00000408276 93 ntBASIC3.38□□□□□ -1.87
SIX5Q8N196 AL445687.1-201ENST00000439946 251 ntBASIC3.38□□□□□ -1.87
SIX5Q8N196 AL021397.1-201ENST00000451806 248 ntBASIC3.38□□□□□ -1.87
SIX5Q8N196 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.38□□□□□ -1.87
SIX5Q8N196 RN7SKP19-201ENST00000516016 252 ntBASIC3.38□□□□□ -1.87
SIX5Q8N196 RN7SKP282-201ENST00000516824 299 ntBASIC3.38□□□□□ -1.87
SIX5Q8N196 AC068657.1-201ENST00000520807 306 ntBASIC3.38□□□□□ -1.87
SIX5Q8N196 AC025166.1-201ENST00000612411 163 ntBASIC3.38□□□□□ -1.87
SIX5Q8N196 AP006437.1-201ENST00000641440 3685 ntBASIC3.38□□□□□ -1.87
SIX5Q8N196 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SIX5Q8N196 RN7SKP220-201ENST00000410611 288 ntBASIC3.37□□□□□ -1.87
SIX5Q8N196 FTH1P12-201ENST00000432137 551 ntBASIC3.37□□□□□ -1.87
SIX5Q8N196 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms