Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL078604.3-201ENST00000615580 211 ntBASIC1.82□□□□□ -2.12
SHFQ7M4L6 U1.36-201ENST00000620684 176 ntBASIC1.82□□□□□ -2.12
SHFQ7M4L6 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
SHFQ7M4L6 ZNF702P-202ENST00000434269 1966 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SHFQ7M4L6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SHFQ7M4L6 Y_RNA.20-201ENST00000362479 113 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 Y_RNA.54-201ENST00000362766 105 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 RNU6-112P-201ENST00000363599 104 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 Y_RNA.188-201ENST00000363952 111 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 RNU6-1289P-201ENST00000384431 106 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 Y_RNA.539-201ENST00000384635 107 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 MT-TG-201ENST00000387429 68 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 RNA5SP100-201ENST00000410903 110 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 RNA5SP59-201ENST00000410922 110 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 AL356379.1-201ENST00000414105 126 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 AL135786.1-201ENST00000415892 214 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 AC104332.1-201ENST00000440471 797 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 RPS4XP11-201ENST00000446897 772 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 RPS27P1-201ENST00000450552 247 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 U8.19-201ENST00000459095 133 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 RNU6-1023P-201ENST00000516137 106 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 RNU6-1271P-201ENST00000517049 105 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 AC078899.2-201ENST00000595282 212 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 AC006006.1-201ENST00000603082 144 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 AC022217.4-201ENST00000604389 163 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 AC005972.2-201ENST00000604690 348 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 AL008718.3-201ENST00000610217 321 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 AC068647.2-201ENST00000637380 353 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 AC018630.2-201ENST00000534866 2403 ntBASIC1.81□□□□□ -2.12
SHFQ7M4L6 SNORD27-201ENST00000363981 72 ntBASIC1.8□□□□□ -2.12
SHFQ7M4L6 SNORA63D-201ENST00000364359 132 ntBASIC1.8□□□□□ -2.12
SHFQ7M4L6 RNU6-296P-201ENST00000384608 107 ntBASIC1.8□□□□□ -2.12
SHFQ7M4L6 AL023284.1-201ENST00000403956 276 ntBASIC1.8□□□□□ -2.12
SHFQ7M4L6 SUMO2P12-201ENST00000405924 140 ntBASIC1.8□□□□□ -2.12
SHFQ7M4L6 BTF3P11-201ENST00000426582 477 ntBASIC1.8□□□□□ -2.12
SHFQ7M4L6 HSPE1P21-201ENST00000438283 308 ntBASIC1.8□□□□□ -2.12
SHFQ7M4L6 RNU7-141P-201ENST00000459304 62 ntBASIC1.8□□□□□ -2.12
SHFQ7M4L6 RPS29P21-201ENST00000496272 170 ntBASIC1.8□□□□□ -2.12
SHFQ7M4L6 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.8□□□□□ -2.12
SHFQ7M4L6 AC110588.1-201ENST00000559699 137 ntBASIC1.8□□□□□ -2.12
SHFQ7M4L6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.8□□□□□ -2.12
SHFQ7M4L6 AL162424.1-201ENST00000602325 221 ntBASIC1.8□□□□□ -2.12
SHFQ7M4L6 snoU18.1-201ENST00000629629 71 ntBASIC1.8□□□□□ -2.12
SHFQ7M4L6 MIR6079-201ENST00000635807 62 ntBASIC1.8□□□□□ -2.12
SHFQ7M4L6 AC134026.1-201ENST00000623249 2239 ntBASIC1.8□□□□□ -2.12
SHFQ7M4L6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
SHFQ7M4L6 AC068700.1-201ENST00000565862 3754 ntBASIC1.8□□□□□ -2.12
SHFQ7M4L6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
SHFQ7M4L6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.79□□□□□ -2.12
SHFQ7M4L6 Y_RNA.82-201ENST00000363000 102 ntBASIC1.79□□□□□ -2.12
SHFQ7M4L6 Y_RNA.92-201ENST00000363043 102 ntBASIC1.79□□□□□ -2.12
SHFQ7M4L6 Y_RNA.235-201ENST00000364412 102 ntBASIC1.79□□□□□ -2.12
SHFQ7M4L6 U8.7-201ENST00000364940 136 ntBASIC1.79□□□□□ -2.12
SHFQ7M4L6 Y_RNA.306-201ENST00000365015 102 ntBASIC1.79□□□□□ -2.12
SHFQ7M4L6 Y_RNA.312-201ENST00000365089 102 ntBASIC1.79□□□□□ -2.12
SHFQ7M4L6 Y_RNA.322-201ENST00000365151 102 ntBASIC1.79□□□□□ -2.12
SHFQ7M4L6 RNU6-1323P-201ENST00000384025 107 ntBASIC1.79□□□□□ -2.12
SHFQ7M4L6 RNA5SP109-201ENST00000391010 116 ntBASIC1.79□□□□□ -2.12
SHFQ7M4L6 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.79□□□□□ -2.12
SHFQ7M4L6 Y_RNA.650-201ENST00000459002 102 ntBASIC1.79□□□□□ -2.12
SHFQ7M4L6 AC117454.1-201ENST00000491120 168 ntBASIC1.79□□□□□ -2.12
SHFQ7M4L6 RNU7-115P-201ENST00000516433 55 ntBASIC1.79□□□□□ -2.12
SHFQ7M4L6 Y_RNA.777-201ENST00000516982 102 ntBASIC1.79□□□□□ -2.12
SHFQ7M4L6 RNU6-1096P-201ENST00000517089 102 ntBASIC1.79□□□□□ -2.12
SHFQ7M4L6 MIR4282-201ENST00000583613 67 ntBASIC1.79□□□□□ -2.12
SHFQ7M4L6 Y_RNA.771-201ENST00000598668 102 ntBASIC1.79□□□□□ -2.12
SHFQ7M4L6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.79□□□□□ -2.12
SHFQ7M4L6 Y_RNA.789-201ENST00000622480 102 ntBASIC1.79□□□□□ -2.12
SHFQ7M4L6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
SHFQ7M4L6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SHFQ7M4L6 Y_RNA.76-201ENST00000362931 109 ntBASIC1.78□□□□□ -2.12
SHFQ7M4L6 Y_RNA.122-201ENST00000363331 96 ntBASIC1.78□□□□□ -2.12
SHFQ7M4L6 RNU4-13P-201ENST00000364019 141 ntBASIC1.78□□□□□ -2.12
SHFQ7M4L6 SNORA20.1-201ENST00000364790 130 ntBASIC1.78□□□□□ -2.12
SHFQ7M4L6 Y_RNA.478-201ENST00000384358 107 ntBASIC1.78□□□□□ -2.12
SHFQ7M4L6 SNORD58.1-201ENST00000391313 66 ntBASIC1.78□□□□□ -2.12
SHFQ7M4L6 MTCO2P33-201ENST00000402100 465 ntBASIC1.78□□□□□ -2.12
SHFQ7M4L6 SNORD2.1-201ENST00000458762 69 ntBASIC1.78□□□□□ -2.12
SHFQ7M4L6 RNU6-1291P-201ENST00000516591 104 ntBASIC1.78□□□□□ -2.12
SHFQ7M4L6 RNA5SP437-201ENST00000517249 129 ntBASIC1.78□□□□□ -2.12
SHFQ7M4L6 IGKV3-31-201ENST00000523109 329 ntBASIC1.78□□□□□ -2.12
SHFQ7M4L6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.78□□□□□ -2.12
SHFQ7M4L6 AC024405.2-202ENST00000532731 184 ntBASIC1.78□□□□□ -2.12
SHFQ7M4L6 MIR5089-201ENST00000580047 84 ntBASIC1.78□□□□□ -2.12
SHFQ7M4L6 AP003357.1-201ENST00000604497 148 ntBASIC1.78□□□□□ -2.12
SHFQ7M4L6 BX284668.6-201ENST00000606899 438 ntBASIC1.78□□□□□ -2.12
SHFQ7M4L6 MIR548AY-201ENST00000617669 107 ntBASIC1.78□□□□□ -2.12
SHFQ7M4L6 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.78□□□□□ -2.12
SHFQ7M4L6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SHFQ7M4L6 RNU6-379P-201ENST00000363813 104 ntBASIC1.77□□□□□ -2.13
SHFQ7M4L6 RNU6-211P-201ENST00000384047 107 ntBASIC1.77□□□□□ -2.13
SHFQ7M4L6 MIR520A-201ENST00000384862 85 ntBASIC1.77□□□□□ -2.13
SHFQ7M4L6 MIR520G-201ENST00000385064 90 ntBASIC1.77□□□□□ -2.13
SHFQ7M4L6 AL512604.1-201ENST00000404812 257 ntBASIC1.77□□□□□ -2.13
SHFQ7M4L6 Y_RNA.590-201ENST00000410140 107 ntBASIC1.77□□□□□ -2.13
SHFQ7M4L6 AL158823.1-201ENST00000418441 478 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 187.1 ms